mRNA_E-siliculosus-1a_F_contig1034.274.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A6H5KUS9_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUS9_9PHAE) HSP 1 Score: 1647 bits (4266), Expect = 0.000e+0 Identity = 981/1110 (88.38%), Postives = 991/1110 (89.28%), Query Frame = 2 Query: 971 MSSFGRFGNGEDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXX-----SHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARATELARAAVDHQTSVAPSKRLADLTSKSLDATKT-PAAARSRPGSLPVHRSVGSADWAASEDKDDWCLSAGGPDGVPTTAPSLAAESSTDASSEEYLTSAPELRGAGKSVDGGGGRAGGARGEGLRIWAPGARTLSRDMSTGGGGDGDSTSPAKSAESDAEPISPAGFWREKFETIDARNATRRFSHWEDGTPGDEASPGESVAGSGGASSRGERAGGGRPPLRKDGGDPVAASSEDESADPGEPVGTDAKVGRKLFSSXXXXXXXXXXXXXXXXXXXAERYKKNMLMSSAGKSLEPMVEVDQEVPSPAGPTGEAGGDPPPPLWATTAAVERT-----------------------------REAVAGVG----CSSGSVPPAEEKNGNMAGPGLGWRRGEAGLVIPEPMPQQKPRPVMQSVVPHRVSRVGGDGGGGDSGDPKRPLAAPRPATASPTLPPAGGEHKSKSPQELQQALTPGVKIVRSYSYHGLGSMALYDAAKRGSARYSIRRRPSENSKQFKLCFFRFFDFLVCDLVKRRHRTIVKERAXXXXXXXXXXXXXXXXXXXXXXXXXNSTMRGRGASFERLKTQHTPXXXXXXXXXRGGSNSGSPHAGMPAAVKG 4183
MSSFGRFGNGEDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLH+PAASQRIFFRGGELRNPHTLQD GIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXX SHSRYGSSDSNTEASPRGVSVAGA R XXXXXXXXXXXXXXXXXXXXXXSSGGVL GSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVD ELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARATELARAAVDHQTSVAPSKRLADLTSKSLD KT PAAARSRPGSLP RSVGSADWAASEDKDDW LSAGGP+GVP TAPSLA ESSTDASSEEYLTSAPELRGAGKSVDGGGGRA GARGEGLRIWAPGARTLSRDMSTGGGGD DS SPAKSAESDA+PISPAGFWREKFETIDARNATRRFSHWEDGTPG EASPGESVAGSGGASSRGERAGGGRPPLRKDGGDP AASSEDESADPGEPVGTDAKV +KLFSSXXXXXXXXXXXXXXXX AER KNMLMSSAG SLEPMVEVDQEVPSPAGPTG A R A A VG C + ++G + G+GWRRGEAGLVIPEPM QQKPRPVM SVVPHRVSRVGGDGG D DPKRPLAAPRPATASP LPPA GEHKSKSPQELQQALTPGVKIVRSYSYHGLGSMALYDAAKRG RRPSENSKQFKLCFFRFFDFLVCDLVKRR RTIVKER XXXXXXXXXXXXXXXXXXXXXXXXXNSTMRGRGASFERLKTQHTPXXXXXXXXXRGGSNSGSPHAGMPAAV+G
Sbjct: 1 MSSFGRFGNGEDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLHVPAASQRIFFRGGELRNPHTLQDYGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXXXXXXSHSRYGSSDSNTEASPRGVSVAGASRXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGGVLTGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDAELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARATELARAAVDHQTSVAPSKRLADLTSKSLDFAKTTPAAARSRPGSLPAQRSVGSADWAASEDKDDWFLSAGGPEGVPATAPSLATESSTDASSEEYLTSAPELRGAGKSVDGGGGRAEGARGEGLRIWAPGARTLSRDMSTGGGGDVDSASPAKSAESDADPISPAGFWREKFETIDARNATRRFSHWEDGTPGGEASPGESVAGSGGASSRGERAGGGRPPLRKDGGDPGAASSEDESADPGEPVGTDAKVEQKLFSSXXXXXXXXXXXXXXXXLA-AERCMKNMLMSSAGNSLEPMVEVDQEVPSPAGPTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAPAPVGHHRRCRA--YEGGCRRHGLI---GVGWRRGEAGLVIPEPMLQQKPRPVMPSVVPHRVSRVGGDGGXXDGSDPKRPLAAPRPATASPMLPPASGEHKSKSPQELQQALTPGVKIVRSYSYHGLGSMALYDAAKRG-------RRPSENSKQFKLCFFRFFDFLVCDLVKRRQRTIVKERXXXXXXXXXXXXXXXXXXXXXXXXXXNSTMRGRGASFERLKTQHTPXXXXXXXXXRGGSNSGSPHAGMPAAVRG 1097
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A835Z5L8_9STRA (Phosphatidylinositol 3 and 4-kinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5L8_9STRA) HSP 1 Score: 350 bits (899), Expect = 2.060e-97 Identity = 209/465 (44.95%), Postives = 269/465 (57.85%), Query Frame = 2 Query: 1058 HARKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARATELARAAVDH 2452
++RKR LTVKSW +VKD+KDVL LL + SQR+FFRG E+RN L DCG+ GQT++ A ++ +P+SLEP+ E PR+L+RV+ Q+KRGL+ G P L+LEGTGGTYF+ D ++K+A FKPQDEEPFAPNNPR G V M G G+G + PP+ L A +LGS QEFV H VV DISPS+L R+V KIA+LD+R+LN DRN NILVR RS H+ + DSN G+G GG + G + E EL+PIDHG CL + + I WCDWCWLDW Q+K+P+D E Y++S +P+ AERLG L+L+ PCLRN R+A TLL+ GV AGLTL+D+A I+ R D D+ SELE ++ RA ELARAAVD+
Sbjct: 28 NSRKRKLTVKSWYSVKDVKDVLAGLLQVSVTSQRLFFRGREMRNARALHDCGVDAPGQTLFFAIH-REVAQRPWSLEPYDSL-EPPRALARVINQIKRGLELGLAPALSLEGTGGTYFMTDTRKRKLAAFKPQDEEPFAPNNPR---------GFVGMGHG-GSGGALT---------------APPSALFPAA-------------QLGSLQEFVHHTEVVADISPSKLGARQVHKIAILDIRLLNGDRNDANILVR----RSAPAH-------------HNDHHLRDSN-----------GSGSGGRHAR-----------------------GSSAGQAGELELVPIDHGYCLPDMVEIGWCDWCWLDWPQLKKPLDKETLQYVLSLDPQGDAERLGRKLSLRAPCLRNFRVAGTLLKAGVAAGLTLHDVATIVVRHDLDERSELERIMRRARELARAAVDN 401
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A7S3UXN5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXN5_HETAK) HSP 1 Score: 298 bits (763), Expect = 1.260e-86 Identity = 177/428 (41.36%), Postives = 228/428 (53.27%), Query Frame = 2 Query: 1001 EDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPR---EAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDR--NLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVR-HDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTL 2266
ED + ++ IK + +K+ L K+WST++D+K VLQ LH+P + QR+F+RG ELRN HTL CG++RD QTV LA +P+ P PR L+R L Q +R L+ PEL +EGTGGTYFL+DA ++ + FKP DEEPF PNNPR GG GG +SMRPG+ AGE+Y+REVAAY+LD L GVP T L A+H AF Y D + R K+GSFQ FVR + D +P+RL EV K+ALLD+R+LN DRN N+LVR R R PR GAG A + E ELIPIDHG CL + I WCD CWL+W Q++ P+ P L +++ +P A A RLG L
Sbjct: 12 EDITIGNITLLIKDASDE-RRKKKALETKTWSTIQDVKHVLQQKLHIPISRQRLFYRGRELRNAHTLATCGLFRDRQTVVLAVAPEPGDALLPLARPLNE--NCPRDLARTLTQAQRALELNIVPELAMEGTGGTYFLKDARKRPLGAFKPGDEEPFMPNNPRGFEPGSAGGAGGEALSMRPGVRAGEAYLREVAAYLLDQSWGGLAGVPATALALAQHSAFRYADGRVRPKVGSFQAFVRAEEGCAGDHAPARLPAAEVHKVALLDLRLLNGDRNDANLLVRRRRR---------------------------------PRPAEDGGAGG---------------------------------ASAWELELIPIDHGYCLPERVEIGWCDLCWLEWPQLRAPLSPALRAAVLALDPAAEARRLGRRL 370
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A7S2H589_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H589_9STRA) HSP 1 Score: 285 bits (729), Expect = 2.110e-82 Identity = 162/388 (41.75%), Postives = 212/388 (54.64%), Query Frame = 2 Query: 1064 RKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGT---VSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYI 2218
+KR L V+SWSTVKD+KDVL L + QR+F+RG ELRN H+LQDCGIY++G+T+ L+ P + LE + G + P+SLSR + Q KR + +G P L ++G GGTYF+ ++ + VA FKP+DEEPF NNPR G+ ++MR GI G++Y+REVAAYILD R+ GVP TTLVE ++ FCY D + KLGSFQ FV + VVED S+ T ++V K+A+ D+R+LN DRN NILVR R S+G L +L+PIDHG CLS L I WCDWCWLDW Q+KEP+D E+ DYI
Sbjct: 26 KKRPLPVRSWSTVKDIKDVLSQRLDVQICKQRLFYRGRELRNQHSLQDCGIYQNGETLTLSVRPNTLHNLNFYLETY-GTFKCPKSLSRAIIQSKRAMHKGLTPSLAMDGAGGTYFIPNSMGKYVACFKPRDEEPFTINNPRGQAWSGVTSSDQEELTMRKGIRPGDAYIREVAAYILDTRSFTGVPETTLVECENAKFCYNDKRPVPKLGSFQAFVPNVGVVEDFGLSKFTPKQVHKLAMFDIRVLNGDRNGANILVRENCR-----------------------------------------------------------------------SNGDRL------DLVPIDHGFCLSEVLNIGWCDWCWLDWPQLKEPMDQEILDYI 335
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A1V9ZYF3_9STRA (Phosphatidylinositol kinase (PIK-F) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYF3_9STRA) HSP 1 Score: 305 bits (780), Expect = 3.060e-82 Identity = 181/482 (37.55%), Postives = 253/482 (52.49%), Query Frame = 2 Query: 995 NGEDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARATELA 2434
N +D + S+ ++ ++ RK L +K W+ VKD+KD LQ +L++P + Q++F++G EL N L CGIY+D V+L +++ + + Y++ P+ G P+++ + + +GL GF PEL ++GTGGTYFL+D ++KV FKPQDEEPFAP NPR + LG R + +GE+ REVAAY+LD + GVP TTL E KHPAF Y + K+GS QEFVRHD VV D+SPS + +V KI LLDMRI+N DRN NILVR R + G E+ELIPIDHG L +E+ I WCDWCW +W Q+K P+ E YI+S E +RL + L+ C RN+RIA L+++GV+ + LYD+A + R+D D S LE L A + A
Sbjct: 491 NSDD--LGSVSVFVQMGVNELRDRKIKLVLKPWACVKDIKDQLQRVLNIPTSVQQLFYKGSELNNVRNLVQCGIYQDKVVVHLVLSANARKKHNNLYTIHPY-GNHMFPKTIMKAVHLAMQGLAMGFAPELAMDGTGGTYFLKDPTQRKVCCFKPQDEEPFAPMNPRGFVGDALG--VPGFRKYVLSGEACEREVAAYLLDKDHFAGVPTTTLTEIKHPAFRY-KGEVVYKMGSLQEFVRHDDVVSDLSPSMFSAHQVHKIVLLDMRIVNTDRNDANILVRKRRNNN----------------------------------------------------------------------------GEVEHELIPIDHGYSLPDEMEIAWCDWCWYNWPQLKVPLSEEDRQYILSINVEQEVQRLCAMIPLRPGCKRNMRIAGMLVEKGVRKRVLLYDLARFMCRDDLDTPSRLENLCQEAMQQA 890
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A7R9WD71_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WD71_9STRA) HSP 1 Score: 298 bits (763), Expect = 7.690e-82 Identity = 198/520 (38.08%), Postives = 259/520 (49.81%), Query Frame = 2 Query: 1064 RKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFF-----RGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEP-----------FLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVS-----------MRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAF--------------CYWDHKER-------------KKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEY-ELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACII-RREDFDKV-SELETLIARATELARAAVDH 2452
+KR + VK+WSTVKD+KD LQ LH+P+++Q +FF GGEL N TL D GIYR G+T+ L +E SL+ FL P+SL R + Q +RG G KP+L L+G+GGTY+L DA + +VAVFKP DEEP+A NNPR ++ G G + S MR GI GE+ VREVAA++LD GVP TTL EA+HPAF H KK+GSFQEFV D ++D+SPS+LT EV KIA+LD+R+LN DRNS N+L R RP +Y ELIPIDHG CL I W DWCWLDW Q+K+P+ + +YI+ + +A L L+++ L R + TLL+ GVKAGLTLYDIA + R +D +V S LE L++ ATEL AA+++
Sbjct: 32 KKRPILVKTWSTVKDVKDALQQHLHVPSSAQSLFFGPLLTSGGELPNHRTLHDAGIYRSGETLLLDIKGGNEAASISSLKSSAVNDICVSSSFLDL--TPKSLRRTVQQSRRGFALGLKPDLVLDGSGGTYYLHDARKVRVAVFKPADEEPYAENNPRGYVRQGAGHASDSFSFGFDEVESGMRAGISPGEACVREVAAFLLDHGGFSGVPATTLAEARHPAFNTNGARLKVIEGGASVGSHSLSFSSATISPTLGLPKKVGSFQEFVNSDYSMDDLSPSKLTVDEVHKIAVLDIRLLNADRNSANLLCRRRPE-------------------------------------------------------------------------------DPDYIELIPIDHGYCLRTVSDISWFDWCWLDWPQMKQPLSEKTKEYILRLDIDADVRVLKERLHIRNEALDYFRASSTLLKAGVKAGLTLYDIAVMCCRNDDAGEVPSRLEVLMSMATELTNAAIEN 470
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A5D6XI28_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI28_9STRA) HSP 1 Score: 294 bits (752), Expect = 1.190e-81 Identity = 198/546 (36.26%), Postives = 266/546 (48.72%), Query Frame = 2 Query: 1064 RKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPY-----------------------------------------SLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERK-KLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIA---RATELARAAVDHQ---TSVAPS-----KRLADLTSKSLDATKTPAAARSR 2542
RK+ L ++ W+ VKD+KD LQ + ++PA++Q+++++G EL+N H LQ+ GIY+DG V + Q + Y ++ P+ GA LP +L ++ Q +GL G P L ++GTGGTYF +D + + V FKPQDEEPF P NPR + G LG +R GI +GE+ RE+AAY+LD + GVP T+LVEA+HP F Y D K+GS QEFVRHD VV D+SPS+ +V KI LLDMR+LN DRN NILVR + RS + G EYELIPIDHG CL L I WCDWCW +W Q+KEP+ + Y++S + E L + L+ C RNL IA ++Q+GV+A L LYDIA I+ R+D D S LE L R R A +H ++ APS KR+A S+D T P SR
Sbjct: 30 RKKKLLLRPWAGVKDIKDQLQVVFNVPASAQQLYYQGRELKNAHNLQESGIYQDGAVVDFVARRQLNLALLYGDRLAASATATATARPSTVNGSKAAAAKARENVRPEQAPVINIHPY-GAHLLPIALMKITHQALQGLALGLAPVLAMDGTGGTYFFKDPSHRNVGCFKPQDEEPFGPYNPR-GLVGELG--QSGLRRGILSGEACERELAAYLLDKDHFAGVPATSLVEARHPVFKYGDAGAHHFKVGSLQEFVRHDDVVSDLSPSQFAVHQVHKIVLLDMRLLNTDRNDANILVRKK--RSAA-------------------------------------------------------------------------TGQVEYELIPIDHGYCLPQFLEIAWCDWCWYNWPQLKEPLSADDRAYVLSLSALSDCEALAKKIPLRRACRRNLLIAGMVVQKGVRADLVLYDIARIMCRDDLDAPSVLERLCLDAFRQVVAQRKAAEHPPHLSASAPSSPRNGKRVAQHAPLSIDTTAAPREPSSR 496
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A484E737_BRELC (Ubiquitin-like domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E737_BRELC) HSP 1 Score: 294 bits (752), Expect = 1.910e-81 Identity = 184/514 (35.80%), Postives = 257/514 (50.00%), Query Frame = 2 Query: 1028 ICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTV-YLASSPQD----------------------------------------------EMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERK--KLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARA 2422
I +K + RK++L ++ W+++KD+KD LQ + ++P+ +Q++FF+G EL+N H+LQ CGIY+D V ++A PQ+ E +++P+ G LP +L +++ Q +GL G P L ++GTGGTYF +D + + V FKPQDEEPF PNNPR + G LG +R GI +GE+ RE+AAYILD + GVPPT+LVE++HP F Y K+GS QEFVRHD VV D+SP++ + +V KI LLDMR+LN DRN NILVR R RS S G E+ELIPIDHG CL L I WCDWCW +W Q++ P+ Y++S P+ RL + L+ C RN+ IA +Q+GV+A L L++IA I+ RED D +S LE L +A
Sbjct: 19 IFVKDFRDPLERRKKLL-LRPWASIKDIKDQLQVVFNVPSNAQKLFFKGRELKNTHSLQQCGIYQDNAVVDFVARRPQNISMVYTRECDEQNSAAIKRRNCGEDSKLKNSTSAYLHSKTSQNLRPEQVPVVNIQPY-GTHLLPVALLKIMHQALQGLALGLAPVLAMDGTGGTYFFKDPSHRNVCCFKPQDEEPFGPNNPR-GLVGQLGQN--GLRRGILSGEACERELAAYILDKDHFAGVPPTSLVESRHPVFNYTSSSGAIYFKVGSLQEFVRHDDVVSDLSPNQFSIHQVHKIVLLDMRLLNTDRNDANILVRKR--RSQSM-------------------------------------------------------------------------GHAEFELIPIDHGYCLPQFLEIGWCDWCWFNWPQLQHPLCAGDRAYVLSLSPQDDVARLAERIPLRRACRRNIIIASMTVQKGVRANLILFEIARIMCREDLDTLSTLEQLCIKA 452
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: A0A8K1C962_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C962_PYTOL) HSP 1 Score: 290 bits (743), Expect = 1.740e-80 Identity = 181/508 (35.63%), Postives = 246/508 (48.43%), Query Frame = 2 Query: 1064 RKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYS----------------------------------------------------------LEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWD-HKERKKLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVIDWCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETL 2410
RK+ L ++ W+++KD+KD LQ + ++P+ Q+++++G EL+N H LQ+CGIY+D + + + Y+ + P+ GA LP SL +++ Q +GL G P L ++GTGGTYFL+D + + V FKPQDEEPF PNNPR + G LG +R GI +GE+ RE+AAY+LD + GVP T+LVEA+HP F Y + K+GS QEFVRHD V DI+PS+ + +V KI LLDMR+LN DRN NILVR R T +P V EYELIPIDHG CL L I WCDWCW +W Q+ +P+ E Y++ P ERL + L+ C RN+ IA TL+Q+GVKA L LYDIA I+ R+D D S LE +
Sbjct: 31 RKKKLILRPWASIKDIKDQLQVVFNVPSNVQKLYYQGRELKNAHNLQECGIYQDNVVIDFVARRAHNLALLYTGENEEVDNALTKTASAKSAGGSSRLLNGKSSXXXXXXXXXXXXXXXXXXXRRDMPGVNIHPY-GAHLLPVSLMKIMHQALQGLALGLAPVLAMDGTGGTYFLKDPSHRNVGCFKPQDEEPFGPNNPR-GLVGELG--QSGLRRGILSGEACERELAAYMLDRDHFAGVPATSLVEARHPVFKYQGGDRLHFKMGSLQEFVRHDDVASDIAPSQFSTHQVHKIVLLDMRLLNTDRNDANILVRKR------------------------------RTATTPPQV--------------------------------------------EYELIPIDHGYCLPQFLEIAWCDWCWYNWPQLSKPLSAEDRAYVLELNPVEDTERLSRKIPLRRACRRNMIIAGTLVQKGVKANLVLYDIAKIMCRDDLDTPSTLERM 460
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Match: W7TCJ9_9STRA (Phosphatidylinositol 3-/4-kinase, catalytic domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCJ9_9STRA) HSP 1 Score: 287 bits (734), Expect = 2.500e-80 Identity = 214/579 (36.96%), Postives = 266/579 (45.94%), Query Frame = 2 Query: 971 MSSFGRFGNGEDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVLQSLLHLPAASQRIFFRGGELRNP--------------------------------------------------------------HTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELP--RSLSRVLGQVKRGLDRGFK-PELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPRE-------AMQGGLGG--GTVS---MRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYW---------DHKERK-KLGSFQEFVRHDMVVEDISPSRLTRREVQKIALLDMRILNRDRNSVNILVRSRPRRSCSFSERVRGXXXXXXXSHSRYGSSDSNTEASPRGVSVAGAGRGGTQSXXXXXXXXXXXXXXXXXXXXXXSSGGVLAGSTEYELIPIDHGLCLSNELVID-WCDWCWLDWRQIKEPVDPELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGV-KAGLTLYDIACIIRREDFDKVSELETLIARATELARA 2440
SS GR GE RE G + KR LT KSWST+KD+K LQ+LLH+P QR+FF G EL +P H+LQDCGI RDG+T+Y +P + + ++ G LP R L R L QV+R +D G P+LT+EG GGTYFL D R+ +AVFKP DEEP+AP NPR GG GG G V MRPG+ GE YVREVAA++LD GVP T +V+A+HPAF Y D +E K+GSFQE+VRHD V ED+S S EV KIAL+D+R+LN DRN NILVR RV G G GR G G YELIPIDHG CL L ID + CW WRQ+ EP D YI S++ EA A L L + E L LR+ +LQ V +AGLTL+++AC++ R+ + SE+E + A LA A
Sbjct: 45 QSSLGR--RGEVEGGRE---------GVLEGGKRPLTFKSWSTIKDVKQTLQTLLHVPMNKQRLFFNGRELSSPSGPTCTARPAPLPCSPPPSAYVSPSSDSYALPDLWRRNTTGMSWNKQLDAKAKGLRELSNYGHSLQDCGIVRDGETIYFTIAPPSSLDRDRAVPILRPYGLLPPPRRLGRALKQVRRAMDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPELVADWGKVGGRGGDKGRVEVFQMRPGVTPGEGYVREVAAFLLDHEGFAGVPETIMVQARHPAFHYLPSSVCSGGNDGQEGSVKVGSFQEYVRHDYVGEDLSSSLFPVAEVHKIALMDLRLLNSDRNGGNILVR-----------RVTGR----------------------------GGGREGEP------------------------------GGPRYELIPIDHGYCLPETLCIDDTLNLCWFGWRQMHEPCDAATRAYIASWDAEADATLLQAHLGIGEAALDLLRVTTRMLQIAVLEAGLTLHEVACLLVRQTPEIASEIEKVRENAETLAMA 543 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1034.274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1034.274.1 >prot_E-siliculosus-1a_F_contig1034.274.1 ID=prot_E-siliculosus-1a_F_contig1034.274.1|Name=mRNA_E-siliculosus-1a_F_contig1034.274.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1072bp MSSFGRFGNGEDHAMREFSICIKPLDGKIHARKRVLTVKSWSTVKDLKDVback to top mRNA from alignment at E-siliculosus-1a_F_contig1034:11891..23417+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1034.274.1 ID=mRNA_E-siliculosus-1a_F_contig1034.274.1|Name=mRNA_E-siliculosus-1a_F_contig1034.274.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11527bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1034:11891..23417+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1034:11891..23417+ >mRNA_E-siliculosus-1a_F_contig1034.274.1 ID=mRNA_E-siliculosus-1a_F_contig1034.274.1|Name=mRNA_E-siliculosus-1a_F_contig1034.274.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6432bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1034:11891..23417+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |