mRNA_E-siliculosus-1a_F_contig10329.268.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match: D7FTK7_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK7_ECTSI) HSP 1 Score: 192 bits (488), Expect = 1.130e-60 Identity = 98/136 (72.06%), Postives = 114/136 (83.82%), Query Frame = 1 Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVY------EILQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERDLRLREANDRRAGVLSDGCASSPSDVEVVEDSTTTTPG 390
YLQ+AWSS+DRGEAT+DKDLLPLVIT+SPQQ NG DCG+ +ILQEWPI TQA+VDDGM+ HFTPELFS SDI ERR++R+LLQTYKDRYER+LRLRE ++RRAGVLSD ASSPSDVEV +D T + G
Sbjct: 22 YLQEAWSSNDRGEATVDKDLLPLVITESPQQGNGCDCGILVLRNAKDILQEWPIATQAEVDDGMQKHFTPELFSPSDISNERRMLRQLLQTYKDRYERELRLREISERRAGVLSDDSASSPSDVEVEKDHRTMSSG 157
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match: D8LDN6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN6_ECTSI) HSP 1 Score: 103 bits (258), Expect = 2.850e-23 Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVY------EILQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERD 279
YLQ W + RGE D+D+ PLV + P Q NG DCGVY EI Q+WP+VT A+V + + HF PELFS SDI +ERR++RELL+ K RYER+
Sbjct: 502 YLQAKWKETGRGEMLFDQDVFPLVRPRVPTQINGCDCGVYVLRYAKEICQQWPVVTAAEVKNRLSAHFRPELFSPSDITEERRMLRELLENCKVRYERE 600
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match: A0A6H5KTD8_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD8_9PHAE) HSP 1 Score: 103 bits (256), Expect = 5.350e-23 Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVY------EILQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERDLRLREANDRRAGV-----LSDGCASSPSDVEVVEDST 375
YLQ W + RGE D+ + PLV + P Q NG DCGVY EI Q+WP+VT A+V + + HF PELFS SDI +ERR++RELL+ K RYER+ L ++ + G S G ++S S EV + +T
Sbjct: 804 YLQAKWKETGRGEMLFDQHVFPLVRPRVPTQINGCDCGVYVLRYAKEICQQWPVVTVAEVKNRLSAHFRPELFSPSDITEERRMLRELLENCKVRYEREKDLHKSKKGKKGRGNKTHFSAGASTSSSTPEVKKSAT 939
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match: A0A6H5JQ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ96_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.170e-16 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVYEI-----------LQEWPIVTQADVDDGMRNHFTPELFSRSDILKERRIIRELL 249
YLQ W S RGE +LPLV ++P Q N +D GVY + +WP+VT ADV+DGM+ HF +LF+ SDI +ERR++ +L+
Sbjct: 4 YLQAKWKESWRGELVFSAVVLPLVCPQAPTQTNAYDGGVYVLRFAKARSRLCPCMKWPVVTAADVNDGMQAHFNLQLFNASDITEERRMLGKLV 97
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match: D7FID8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID8_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 2.390e-11 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 1 Query: 142 IVTQADVDDGMRNHFTPELFSRSDILKERRIIRELLQTYKDRYERDLRLREANDRRAGVLSDGCASSPSDVEVVED 369
+VT A+VD+ M+ HF+P+LFS DI +RR++R+LL K RYER++ ++AN+ V S SS DVEVVED
Sbjct: 1 MVTTANVDNKMKEHFSPDLFSPLDITDDRRLLRKLLHDCKVRYEREVEQQQANNMDPTVESQDPTSSTPDVEVVED 76
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Match: UPI001CF49ACC (uncharacterized protein LOC122954217 isoform X1 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF49ACC) HSP 1 Score: 51.2 bits (121), Expect = 7.300e-5 Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 1 Query: 1 YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVYEIL 129
+L+ W + R +D+ LPLV K PQQDNG+DCGVY +L
Sbjct: 461 FLRCEWVAKKRSTLQVDEKSLPLVYPKVPQQDNGYDCGVYVLL 503 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10329.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10329.268.1 >prot_E-siliculosus-1a_F_contig10329.268.1 ID=prot_E-siliculosus-1a_F_contig10329.268.1|Name=mRNA_E-siliculosus-1a_F_contig10329.268.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=130bp YLQQAWSSSDRGEATIDKDLLPLVITKSPQQDNGFDCGVYEILQEWPIVTback to top mRNA from alignment at E-siliculosus-1a_F_contig10329:758..2554- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10329.268.1 ID=mRNA_E-siliculosus-1a_F_contig10329.268.1|Name=mRNA_E-siliculosus-1a_F_contig10329.268.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1797bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10329:758..2554- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10329:758..2554- >mRNA_E-siliculosus-1a_F_contig10329.268.1 ID=mRNA_E-siliculosus-1a_F_contig10329.268.1|Name=mRNA_E-siliculosus-1a_F_contig10329.268.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=780bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10329:758..2554- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |