mRNA_E-siliculosus-1a_F_contig1032.264.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 1.530e-137 Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 1 Query: 1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGK+GNLYPTDPIQAAFADSATDAVSDI GYMRGIIFEKDADKKAQLRK+LVETLLPTWLANLEKALKLAGG YFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESP VSSLVQRVMAEPRIVAYMEERPKK
Sbjct: 1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 352 bits (902), Expect = 5.520e-119 Identity = 178/207 (85.99%), Postives = 189/207 (91.30%), Query Frame = 1 Query: 1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTF-EGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
MAPMKLTYF+ AALGE LRLALAQSGVEWIDNRV E+WPTLKPTLPYQQMPVLEVDGAVIPQ+ AILRYVGKMG+LYPTDPIQAAFADSATDAV+D+HG+MR I FEKDAD K QL K+LVE LLP WLANLEKALKLAGG YFAGDKLSIGDIAVVARLNWLTDGTF E VPS +L+E P +SSLVQRVMAEPRIVAYMEERPKK
Sbjct: 1 MAPMKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPKK 207
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 280 bits (716), Expect = 1.540e-91 Identity = 141/156 (90.38%), Postives = 146/156 (93.59%), Query Frame = 1 Query: 151 MPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
MPVLEVDGAVIPQS+AILRYVGKMGNLYP DPIQAAFADSA DAVSDIHGYMRGIIFEKDAD KAQLRK+LVETLLP WL N EKALKLAGG YFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLL+E P +SSLVQR+MAEPRIVAYME RPKK
Sbjct: 1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPKK 156
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 242 bits (618), Expect = 5.320e-76 Identity = 116/199 (58.29%), Postives = 151/199 (75.88%), Query Frame = 1 Query: 16 LTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERP 612
L+YF+ ALGEPLRLALA SG W D RV E++ +KP+LPY Q+P LEV G +IPQSLA +RY+GK+G LY DPI+AAFAD+A +AV D+H ++R + E+D KK ++RK + + LPTWL NLE+ALK AGG+YFAG KLSIGDI VVARLNWL G +G+P T++D+ P +S+LVQ VM+E +IV Y+E P
Sbjct: 7 LSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 220 bits (561), Expect = 2.590e-67 Identity = 111/206 (53.88%), Postives = 147/206 (71.36%), Query Frame = 1 Query: 1 MAP---MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEER 609
MAP + LTYF+FA EP+R+ALA +G W D RV ++P LKP LP Q+P+LEV G V+PQS A LRYVGK+ LYP D ++AA AD+A D+V D H + + +KD ++ ++R+ LV LPTWL NLEKAL AGG YFAG KLSIGDIAVVARL WL +G+ +G+P++++DE P +S+L++RV AEP I Y +ER
Sbjct: 1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQER 206
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE) HSP 1 Score: 176 bits (447), Expect = 2.590e-50 Identity = 92/207 (44.44%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDES-PFVSSLVQRVMAEPRIVAYMEERPK 615
MAP + LTYF+ EP+R AL QSG EW D R+ E++ +KP+LP Q+PVLEVDG +PQS+ ILRYVGK+G L+P+D ++AA D+ DA D + +R EKD K+ ++ +L +P WLAN+EK L G YFA +K+S+ DI + RL L DG + GVP+T+ D S P +++L ++ EP+I A++ + K
Sbjct: 1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFA-EKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 169 bits (427), Expect = 2.400e-47 Identity = 83/206 (40.29%), Postives = 131/206 (63.59%), Query Frame = 1 Query: 1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPK 615
MAP + L YF+ A EP+R AL + +EW D R+ E++ LKP+LP Q+PVL +DG + QS+AILRYVGK+G L P+D + AA D+ D V+D+H +R EKD KK ++R +L +P WL+N+EK L G +F DK+++ DI + RL+ + +G +G+P+T+ D P + ++ V++EP++ A++ + K
Sbjct: 1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFF-DKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI) HSP 1 Score: 162 bits (409), Expect = 2.660e-44 Identity = 82/206 (39.81%), Postives = 122/206 (59.22%), Query Frame = 1 Query: 1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
M+ + LTYF+ E +RLA G+ + D RV +++ +K LP+ Q+P+L VD V PQS AILRY GK+G LYP+DPI AA D+ D + DI +R I+E +A +K +RKEL E LP WL LE+ L+ AG +F G++++I D+ + R+ WL G G+P T+L V + + V + P++ Y + P K
Sbjct: 1 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGK 206
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: F2U7D3_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7D3_SALR5) HSP 1 Score: 157 bits (398), Expect = 2.230e-41 Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 1 Query: 13 KLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK*MTEIAQ 639
+L YF+ EP RLA +GVE+ D RV +QW LKP PY Q+P+L+VDG +I QS AI+R+VGK NLYP D ++AA D + DI+ + I E+D ++K +R+EL LLP WLA L K + G D++SI D+ + WLT G +G+P T++D+ + +L R+ +P + AY ++ K E A+
Sbjct: 31 RLVYFDIRGRAEPARLAFHLAGVEFADVRVSRDQWCKLKPKCPYGQLPILQVDGQIIAQSSAIIRFVGKKTNLYPEDHMEAARVDEVIGLIEDINWLIIPTIKERDMERKLAMRRELATDLLPRWLAVLN--CKFSNGYVLGPDRISIADLTAFTLIGWLTMGVMDGIPKTIVDKHANLKALQARIAKQPNLQAYFDKHYSKDPVEQAK 237
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: A0A534ZXF1_9DELT (Glutathione S-transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZXF1_9DELT) HSP 1 Score: 147 bits (370), Expect = 7.330e-39 Identity = 85/203 (41.87%), Postives = 120/203 (59.11%), Query Frame = 1 Query: 1 MAPMKLTYFEF-AALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLV---QRVMAEPRIVAY 597
M +KLTYF+F GEP RLAL+ +G+ + D+RVP WP KP+ P+ +PVLEVDGA++ QS I RYVGK+ +LYP+DP QAA D A +AV DI + + KKAQ R+ L + + +L L++ L+ GG YFAG +LS+ D+ V + L G + +P+ L D + LV +RV P + AY
Sbjct: 1 MPKLKLTYFDFHGGRGEPARLALSIAGIPFEDDRVPGPDWPRRKPSTPFGSLPVLEVDGAIVTQSNGINRYVGKLADLYPSDPWQAALCDEAMEAVEDITSEVSATFSLPEDQKKAQ-RQALADGPITFFLTRLQQRLEAGGGQYFAGGRLSVADLKVFVWIRHLRSGKLDYIPADLPDR--VAAKLVAHFERVKNHPGMKAY 200 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1032.264.1 >prot_E-siliculosus-1a_F_contig1032.264.1 ID=prot_E-siliculosus-1a_F_contig1032.264.1|Name=mRNA_E-siliculosus-1a_F_contig1032.264.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQback to top mRNA from alignment at E-siliculosus-1a_F_contig1032:2009..6032+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1032.264.1 ID=mRNA_E-siliculosus-1a_F_contig1032.264.1|Name=mRNA_E-siliculosus-1a_F_contig1032.264.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4024bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1032:2009..6032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1032:2009..6032+ >mRNA_E-siliculosus-1a_F_contig1032.264.1 ID=mRNA_E-siliculosus-1a_F_contig1032.264.1|Name=mRNA_E-siliculosus-1a_F_contig1032.264.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1032:2009..6032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |