mRNA_E-siliculosus-1a_F_contig1031.262.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A6H5JRL4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRL4_9PHAE) HSP 1 Score: 852 bits (2201), Expect = 1.940e-307 Identity = 451/475 (94.95%), Postives = 455/475 (95.79%), Query Frame = 1 Query: 34 MKASLATPRALATAGGSVLLLFASPAETFCVPPSAFQNTLPSNLASRHYHESSASTI-----ATATARIGFPTQRRSLVPMALSDSGGGGDDGDSVGSGWLSGWKRGLVSAAVGLSVLSGGLTTSYLPGLTSSAAQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRTQLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVTEDGTETLFLKIQLAEAPQPVVQAS 1443 MKASLATPRALA AGGSVLLLFASPAETFCVPPSAFQNTLPSNLASRHYH SSAST A TARIGFPTQRRSLV MALSDSGG GD+GD VGSGWLS WKRGLVSAAVGLSVLSGGLTTSYLPG TSSAAQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAP+ELLRPI LG SN LKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAA SGLRPTTRTQLGDIIVAIDKQEINTE DLFKVLESRKPGDE+AITAERVTEDGTETLFLKIQLAEAPQP+VQAS Sbjct: 2 MKASLATPRALAIAGGSVLLLFASPAETFCVPPSAFQNTLPSNLASRHYHGSSASTRPAAAPAATTARIGFPTQRRSLVAMALSDSGGSGDEGDGVGSGWLSDWKRGLVSAAVGLSVLSGGLTTSYLPGFTSSAAQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPSELLRPIGLGASNALKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAAKSGLRPTTRTQLGDIIVAIDKQEINTEVDLFKVLESRKPGDEVAITAERVTEDGTETLFLKIQLAEAPQPIVQAS 476
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A836C9K9_9STRA (Serine type protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9K9_9STRA) HSP 1 Score: 437 bits (1124), Expect = 5.350e-146 Identity = 226/336 (67.26%), Postives = 269/336 (80.06%), Query Frame = 1 Query: 457 EKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLT-LGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT-----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVT--EDGTETLFLKIQLAEAPQPVVQA 1440 E G I +FE+STPGVVYI+TFVNQRDAFSMN+LEVPAGTGSGFVWD +G+IVTNFHVIR A +AQVR+T G Q ++ A+V+GYDPDKDVAVLKIDAP E L+PI LG S LKVGQLALAIGNPFGLDHTLT GV+SGLGREV+SPSGRPISNV+QTDAAINPGNSGGPLL+S G+I GMNTAIYSPSG SAGIGFAIPIDT+KT+VG II+ G V+RP+IGIT+L+SA+A +GI GVLVLDV G++A +GLR T R+ +LGDII ID +I+ E DLFK LE RKPGD I IT R ++ T+ + L++ L ++ P + Sbjct: 9 ENGLIKVFEQSTPGVVYISTFVNQRDAFSMNILEVPAGTGSGFVWDKEGHIVTNFHVIRSANTAQVRITDPSTGKQASYAARVQGYDPDKDVAVLKIDAPPEQLQPIPLGSSAVLKVGQLALAIGNPFGLDHTLTTGVISGLGREVRSPSGRPISNVVQTDAAINPGNSGGPLLNSAGQITGMNTAIYSPSGASAGIGFAIPIDTIKTIVGMIIETGSVTRPVIGITYLQSAQAKALGIDDGVLVLDVPAGSAAEKAGLRGTARSRSGYIELGDIITMIDGDKISNEVDLFKALEDRKPGDVITITVTRTNMEDESTQEVKLRVTLQQSATPTAMS 344
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: K8YVK1_NANGC (PDZ domain-containing protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVK1_NANGC) HSP 1 Score: 424 bits (1089), Expect = 2.170e-139 Identity = 221/340 (65.00%), Postives = 269/340 (79.12%), Query Frame = 1 Query: 427 AAMAP-SLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT-----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVTE-DGTETLFLKIQLAEAPQ 1425 A++ P L E I IF+++TP V INTFV QRDAFSMNV+EVPAGTGSGFVW+D+G IVTN+HVIR A+SAQV LT DG Q T++A ++G+DPDKDVAVL+++AP LRPI +G S+TLKVGQ ALAIGNPFGLDHTLT GV+SGLGREV+SPSGRPISNVIQTDAAINPGNSGGPLLDS GR++GMNTAIYSPSG SAGIGFAIP+DTLK VV TII+ G+V RP+IGIT+LES++A +GI KGVLVLDV + A +G+R T+R+ QLGDIIV I+ +IN EADLFK LE +PGD++ + RV + TE + L ++L + Q Sbjct: 102 ASLLPYELTMGETSRIGIFQEATPSVANINTFVEQRDAFSMNVMEVPAGTGSGFVWNDKGYIVTNYHVIRSAESAQVTLTDRDGHQSTYKALLRGFDPDKDVAVLRVEAPPASLRPIPVGSSSTLKVGQAALAIGNPFGLDHTLTSGVISGLGREVRSPSGRPISNVIQTDAAINPGNSGGPLLDSAGRLVGMNTAIYSPSGASAGIGFAIPVDTLKFVVETIIKDGKVVRPLIGITYLESSQAKALGIDKGVLVLDVPRQSPGALAGMRGTSRSRLGLIQLGDIIVQINNDDINNEADLFKTLEKYRPGDKVKVVVRRVLAVNETEKVILNVKLRGSDQ 441
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A7S2G6Y9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6Y9_9STRA) HSP 1 Score: 392 bits (1006), Expect = 1.250e-125 Identity = 204/323 (63.16%), Postives = 257/323 (79.57%), Query Frame = 1 Query: 415 SAAQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAP----TEL-LRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT-----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAI 1353 SA A + +DE I +FE +TP VV+INTFV++ D FS+NVLE P GTG+GFVWD++G+IVTNFHVIR +++A + +T +G Q T++A ++G+DPDKDVAVLKI+ T L L+P+ LG S LKVGQ ALAIGNPFGLDHTLT GV+SGLGREV+SPSGRPISNVIQTDAAINPGNSGGPLLDS G+++GMNTAIYSPSG S GIGFAIP+DTLK VV +II+ G+V RP IG+++LESA+A+ +GI KGVLVLDV + + A+++G+R TTR+ LGDII+AID +N E DLFKVLE+ +PGDE+AI Sbjct: 65 SAGTAGLDLRTKEDET--IQLFESTTPSVVFINTFVDKVDTFSLNVLETPLGTGTGFVWDNEGHIVTNFHVIRNSEAASIVVTDKNGAQGTYRATLRGFDPDKDVAVLKIEPQLKNGTRLNLQPVNLGTSTGLKVGQSALAIGNPFGLDHTLTTGVISGLGREVRSPSGRPISNVIQTDAAINPGNSGGPLLDSKGKLVGMNTAIYSPSGASVGIGFAIPVDTLKVVVDSIIKLGKVIRPAIGVSYLESAQASALGISKGVLVLDVPKDSPASAAGMRGTTRSTRGFVDLGDIILAIDDHLVNNEKDLFKVLETYRPGDEVAI 385
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A7S0EJU7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EJU7_9CRYP) HSP 1 Score: 386 bits (991), Expect = 3.070e-125 Identity = 207/376 (55.05%), Postives = 268/376 (71.28%), Query Frame = 1 Query: 313 GWLSGWKR----GLVSAAVGLSVLSGGLTTSYLPGLTSSAAQAAMAP------------SLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVTEDG 1380 G+ S WK+ G + +GLS S L++ L A AA+AP +L E I++F ++TP VV+I+TF ++D F++++ E+P GTGSGFVWD QG+IVTNFHVIR A SAQV L+ G Q ++A + G DPD D+AVLKI+AP LRPI +G S+ L+VGQ ALAIGNPFGLDH+LT+GVVSGLGRE KSP+GRPISNVIQTDAAINPGNSGG LL+S G++IGMNTAIYSPSG ++G+GFAIP+DT+K VV +I G ++RPIIGI+FL+S + +G+ +GVLVLDV +G+ AA +GLR T RT ++GDIIV +D EI E DLF LE KPGD + + +RV+EDG Sbjct: 23 GFHSKWKKYVATGAAAFCLGLSFQSPILSSQTTANLIPVARDAALAPCKPANSFLESDAALEPSEVRTINLFRENTPSVVFISTFTERQDFFTLDMEEIPQGTGSGFVWDKQGHIVTNFHVIRSANSAQVALSDAKGKQTMYKATLTGIDPDNDIAVLKIEAPPAALRPIEVGTSSDLQVGQTALAIGNPFGLDHSLTIGVVSGLGRETKSPTGRPISNVIQTDAAINPGNSGGALLNSQGKLIGMNTAIYSPSGANSGVGFAIPVDTIKYVVKKLISDGSITRPIIGISFLDSEQTRGLGLPQGVLVLDVPKGSLAAKAGLRGTVRTFRGIEVGDIIVGLDSAEIKKEGDLFAALEPHKPGDVVELRVKRVSEDG 398
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A7S2D2Z2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2Z2_9STRA) HSP 1 Score: 386 bits (991), Expect = 6.670e-124 Identity = 202/338 (59.76%), Postives = 255/338 (75.44%), Query Frame = 1 Query: 370 LSGGLTTSYLPGLTSSAAQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKID-----APTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT-----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAI 1353 L+G L + + TS+A A + L E I +FE +TP VVYINTF+ +RD+ SMNVLE P GTGSGF+WD+ G +VTNFHVIR ++SAQV +T +G Q T+ A ++G+D DKD+AVLKI A + P+ +G S LKVGQ ALAIGNPFGLDHTLT+GV+SGLGREV+SPSGRPI+NVIQTDAAINPGNSGGPLLDS GR++GMNTAI+SPSG S GIGFAIP+DTLK VV +II+ G+V RP IG+++LESA+A +GI++GVLVLDV G+ AA +G+R T+R+ LGD+I+AID + IN E DLFKVLE+ PG I + Sbjct: 76 LAGLLLSGAVVPATSTALAAPYSDDLRVRESSTIRLFESATPAVVYINTFIEKRDSLSMNVLETPQGTGSGFLWDNSGYVVTNFHVIRNSESAQVTVTDSNGDQSTYNATLRGFDADKDIAVLKITNISATAKSTPFVPVKIGTSTGLKVGQSALAIGNPFGLDHTLTVGVISGLGREVRSPSGRPITNVIQTDAAINPGNSGGPLLDSSGRLVGMNTAIFSPSGASVGIGFAIPVDTLKVVVDSIIRLGKVVRPAIGVSYLESAQARALGIERGVLVLDVPPGSPAAVAGIRGTSRSTRGFLDLGDVILAIDDKPINDERDLFKVLETYTPGVAIRV 413
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A0M0J473_9EUKA (Protease n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J473_9EUKA) HSP 1 Score: 382 bits (980), Expect = 8.590e-124 Identity = 206/359 (57.38%), Postives = 264/359 (73.54%), Query Frame = 1 Query: 328 WKRGLVSAAVGLSVLSGGLTTSYLPGLTSSAAQAAMAPS-LMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRTQ-----LGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVTEDGTE 1386 W+R L+S SVL+ LT S P LT+ A+ MA S L + E+ +F ++ P VV+I TFV + D SM+ EV AGTGSGFVWDD G+IVTN+HVIR A++A+V LT +G QK F A++ GY+PDKDVAVLKIDA PI+LG S++L+VGQ LAIGNPFGLDHTLTMGVVSGLGREV+SPSGRPI+NVIQTDAAINPGNSGG LLDS GR+IGMNTAIYSPSG SAGIGFAIP+DTLK V TII+ G+V+RP IGI+++ +A +G+ +GVLVLDV E +SA +GLR + R++ +GD+I A++ ++ + +LF+ ++ KPGD + +T R ED E Sbjct: 27 WQRTLLS-----SVLAATLTWSSGP-LTAHASDLGMAISELQKQEQTVADLFSRARPSVVFITTFVQKTDRMSMSATEVSAGTGSGFVWDDAGHIVTNYHVIRSAEAAKVVLTDENGLQKRFDARLVGYNPDKDVAVLKIDAGLSRPPPISLGSSSSLRVGQTTLAIGNPFGLDHTLTMGVVSGLGREVQSPSGRPITNVIQTDAAINPGNSGGALLDSSGRLIGMNTAIYSPSGASAGIGFAIPVDTLKYQVNTIIKDGKVTRPAIGISYMSYGQARALGVDRGVLVLDVPEQSSADKAGLRGSYRSRSGEIVIGDVITAVNSDVVDDDIELFRAIDKFKPGDRVTLTVSRFDEDDNE 379
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: A0A1Z5JF73_FISSO (PDZ domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JF73_FISSO) HSP 1 Score: 380 bits (976), Expect = 7.580e-123 Identity = 199/356 (55.90%), Postives = 257/356 (72.19%), Query Frame = 1 Query: 397 LPGLTSSAAQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRL-------------------------TLGDGT--QKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRTQ-----LGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERV 1368 LP ++S + A +L + E I+IFEK+ P VV+++TF +RD FS N++EVP G+GSGFVWD +G+IVTN+HV+R A +AQ+ + + G+G + F+A+V G DP KD+AVLK+DAP ELL+PIA+G S LKVGQ ALAIGNPFGLDHTLT G+VSGLGREV+SP GRPISNVIQTDAAINPGNSGGPLLDS G++IGMNTAIYSPSG S+GIGFAIP DT+K VV T+I+ GRV RPIIGI++LES +A ++GI GVL+LDV G+ AA++GL+ T RT+ +GDII+ + +IN EADLF+ LE +PGD + + R+ Sbjct: 60 LPAVSSLLSVPQSARALSESESKRIAIFEKTAPSVVFLDTFTERRDQFSPNIMEVPLGSGSGFVWDKEGHIVTNYHVVRNALTAQIAILTDAACQQSCKNDVPIPYTSMRGSSSFGNGNIARSVFKAKVVGVDPSKDIAVLKVDAPPELLQPIAVGTSKGLKVGQTALAIGNPFGLDHTLTTGIVSGLGREVRSPIGRPISNVIQTDAAINPGNSGGPLLDSSGKLIGMNTAIYSPSGASSGIGFAIPSDTIKFVVETLIRDGRVVRPIIGISYLESRQARSLGITNGVLILDVPPGSPAAAAGLKGTRRTENGLIEIGDIIIQVGNTKINREADLFEALEDLQPGDVVEVKVNRL 415
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: M1VCA0_CYAM1 (DegP protease n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VCA0_CYAM1) HSP 1 Score: 379 bits (973), Expect = 1.310e-121 Identity = 190/330 (57.58%), Postives = 257/330 (77.88%), Query Frame = 1 Query: 445 LMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKGRVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT-----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVTEDGTETLFLKIQLAEA 1419 L +EK +++FE++ VV + T + +RD S+N++EVP+G GSGF+WD G++VTNFHV+R+A++A R+T+ DG KT+ A++ GYD DKDVAVLKIDAPTE LRP+ LG S L VGQ A AIGNPFGL+ T+T G++SGLGRE++SP+GRPI+NV+QTD+AINPGNSGGPLLDS GR+IGM TAIYSPSG SAG+GFAIPIDTLKTVV T+I+ G+V+RP+IGI++LES++A +GI +GVLVLDV +G+ AA +GL+ T R+ +LGDIIV +D + I EADLF+VLE +KPG + + R D + L+++L+ + Sbjct: 149 LSPEEKATVALFERNRDSVVLVTTLIERRDFSSLNIMEVPSGNGSGFIWDKDGHVVTNFHVVRQAEAA--RVTMADG--KTYPARLVGYDADKDVAVLKIDAPTETLRPVTLGSSAGLHVGQRAYAIGNPFGLNETMTQGIISGLGREIRSPTGRPITNVLQTDSAINPGNSGGPLLDSQGRVIGMTTAIYSPSGASAGVGFAIPIDTLKTVVDTLIKYGKVTRPMIGISYLESSQAQILGINEGVLVLDVPQGSEAAKAGLQGTRRSTFGQLELGDIIVGLDGERIRNEADLFRVLEEKKPGQVVTLEVIRGN-DPRNLVKLQVKLSSS 473
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Match: L1JKS3_GUITC (PDZ domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JKS3_GUITC) HSP 1 Score: 371 bits (952), Expect = 1.400e-119 Identity = 191/327 (58.41%), Postives = 249/327 (76.15%), Query Frame = 1 Query: 421 AQAAMAPSLMQDEKGYISIFEKSTPGVVYINTFVNQRDAFSMNVLEVPAGTGSGFVWDDQGNIVTNFHVIREAQSAQVRLTLGDGTQKTFQAQVKGYDPDKDVAVLKIDAPTELLRPIALGVSNTLKVGQLALAIGNPFGLDHTLTMGVVSGLGREVKSPSGRPISNVIQTDAAINPGNSGGPLLDSVGRIIGMNTAIYSPSGGSAGIGFAIPIDTLKTVVGTIIQKG-RVSRPIIGITFLESARANTVGIKKGVLVLDVKEGTSAASSGLRPTTRT----QLGDIIVAIDKQEINTEADLFKVLESRKPGDEIAITAERVTEDGTE 1386 + +A+ PS E I++F ++TP VV+I+TF ++D F++++ E+P GTGSGFVWD +G+IVTNFHVIR A SAQV L+ G Q ++A + G DPDKD+AVLKI+AP LRPI +G S L VGQ ALAIGNPFGLDH+LT+GVVSGLGRE KSP+GRPISNVIQTDAAINPGNSGG LL+S G++IGMNTAI+SPSG ++G+GFAIP+DT+K VV +I G +++RP+IGI+FL+S + +G+ +GVLVLDV +G+ AA +GLR T RT ++GDIIV +D +I E DLF LE KPGD + + +R TEDG E Sbjct: 58 SDSALEPS----EVRTINLFRENTPSVVFISTFTERQDFFTLDMEEIPQGTGSGFVWDKEGHIVTNFHVIRSANSAQVALSDAKGKQTLYKATLTGVDPDKDIAVLKIEAPPAALRPIDVGTSADLLVGQTALAIGNPFGLDHSLTIGVVSGLGRETKSPTGRPISNVIQTDAAINPGNSGGALLNSQGKLIGMNTAIFSPSGANSGVGFAIPVDTIKYVVKKLITDGSQITRPVIGISFLDSEQTRGLGLPQGVLVLDVPKGSPAAQAGLRGTVRTFRGIEVGDIIVGLDSVDIRKEGDLFAALEPHKPGDVVELRVKRGTEDGKE 380 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1031.262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1031.262.1 >prot_E-siliculosus-1a_F_contig1031.262.1 ID=prot_E-siliculosus-1a_F_contig1031.262.1|Name=mRNA_E-siliculosus-1a_F_contig1031.262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=471bp MKASLATPRALATAGGSVLLLFASPAETFCVPPSAFQNTLPSNLASRHYHback to top mRNA from alignment at E-siliculosus-1a_F_contig1031:11990..18217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1031.262.1 ID=mRNA_E-siliculosus-1a_F_contig1031.262.1|Name=mRNA_E-siliculosus-1a_F_contig1031.262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6228bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1031:11990..18217- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1031:11990..18217- >mRNA_E-siliculosus-1a_F_contig1031.262.1 ID=mRNA_E-siliculosus-1a_F_contig1031.262.1|Name=mRNA_E-siliculosus-1a_F_contig1031.262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2826bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1031:11990..18217- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |