mRNA_E-siliculosus-1a_F_contig103.253.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 1040 bits (2689), Expect = 0.000e+0 Identity = 566/585 (96.75%), Postives = 569/585 (97.26%), Query Frame = 1 Query: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSAPAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV--------------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEADMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 1713 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSAPAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLP+LRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPE DMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPS+GQTFKPDTHAVDVTV+LGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSAPAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSEGQTFKPDTHAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 585
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 796 bits (2055), Expect = 9.000e-285 Identity = 437/598 (73.08%), Postives = 482/598 (80.60%), Query Frame = 1 Query: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGT-SKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSA----PAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV--------------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE--PEADMD-TIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPS-----DGQTFKPDTHAVDVTVALGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 1713 MER RMDT+TLDRVSRLASNVGDA SI VSLG ++WDIKLVD DVRKLL+ +QG QTYAGTSNETEQGRAFL+KQLDGLM EKAQYKEKRLALLQLQ ELP + ED EY+A P +P A TE ED+ AVA TT+VWK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELR+VEYTPVAVRVYGDFA+QAGTYTFAFQGADGATVEKRARFSFTFRRD P SP PWTIVEHHSSSMP APAGLKRV E+TP+ KA + TTIVWKDTVTLGT+DAPKKT+ALY DAVLWGTVSEEVRETPEQIYDYFDFFARLP+LRLVEY+PAP RVYGQFAV+AGTYTFAWQG+D +TVEKRARFSFTFRRD P SP PWTIVEHHSSSMP APA LK VE P A MD +V+ V A++PXXXXXXXX XXXXX + P D + F P TH VDVT+ +G +GLG++LG+E+ G+RW VKGFR+MPDG PA G+EVGDTLQKL+GV LGSYK+GM MFKKQ+GS +T+LRQDEITI Sbjct: 1 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPNLEEDEEYAAGAPEPEAPAPPAAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKELEVTPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDPAAVMDEVVVEDAPAVVAAEEPXXXXXXXXAEAEPDVVXXXXXAAEEPASEEAEEVPDFSVVPDEEPFVPPTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQDEITI 598
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 796 bits (2056), Expect = 7.600e-270 Identity = 449/599 (74.96%), Postives = 485/599 (80.97%), Query Frame = 1 Query: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGT-SKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSAPAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV--------------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE--PEADMDTIV--QAVSEVS---------VADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDEITI 1713 MER RMDT+TLDRVSRLASNVGDA SI VSLG ++WDIKLVD DVRKLL+ +QG QTYAGTSNETEQGRAFL+KQLDGLM EKAQYKEKRLALLQLQ ELP + ED EY+A D+ AVA TT++WK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQGADG TVEKRARFSFTFRRD PGSP PWTIVEHHSSSMP APAGLKRV EITPD KAV+ TTIVWK+TVTLGT+DAPKKTAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLP+LRLVEYTPAP RVYGQFAV+AGTYTFAWQG+DG+TVEKRARFSFTFRRD P SP PWTIVEHHSSSMP AP LK VE P A MD +V +A + V+ VAD+P XXXXXXXXXXXXXXXX E S P D + F P TH VDVTV +G HGLGLVLG+E+ G+RW VKGFR+MPDG PA G+EVGDTLQKL+GV LGSYK+GM MFKKQ+GS +TVLRQDEITI Sbjct: 1144 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPKLQEDEEYAA--------------DKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKKLEITPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEEPEEPAVVADEPAAEAEPDVVXXXXXXXXXXXXXXXX-EVPDFSVVP-DEEPFVPTTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQDEITI 1726
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 753 bits (1945), Expect = 5.630e-268 Identity = 416/629 (66.14%), Postives = 460/629 (73.13%), Query Frame = 1 Query: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYS---------------------------------------APAGKSPGVAT-TEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV-----------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEAD-MDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDT-----HAVDVTVALGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQ-DEITI 1713 M+R RM T +RVSR+AS DA SI+VSLG D DI+LVD +VR+ LAA+ GT K+TYAG +NET G ++L+KQL+ LMKEKAQ+KEK+LAL QLQ ELP +Y+ APA SP T ED++AVADTTLVWKETVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQG DG TVEKRARFSFTFRR RPGSP+PWTIVEHHSSSMPTAPAGLKRV EITPDQKAVA TTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLP+LRL+EYTPAPVRVYG+FAV+AGTYTFAW+GDDG TVEKRARFSFTFRR KPGSP+PWTIVEHHSSSMP APAELK VEPE D +D + QAV+++S S P GQ T H+VDVT +G GLGLVLGKEE G+RW V GFR MPDG+PNPA A GIEVGDTLQ++ GV LG+YK+G+E+FKK G VV+TV RQ DEI I Sbjct: 1 MDRSRMSTNAFERVSRVASGAKDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKKETYAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPK--RAAKYAERREAPAXXXXXXXXXXXXXXPAATGGFLSSLKNMIISPAPAEPSPAATVPTPEEDRQAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLKRVGQDAMPKKIVKEITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSS------------------------VSSSTLPPSPPPRKGQAMAAFTEDVNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEILI 603
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 743 bits (1918), Expect = 3.140e-266 Identity = 390/448 (87.05%), Postives = 394/448 (87.95%), Query Frame = 1 Query: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYSAPAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV-----------------------------------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPV 1239 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPED YS DQKAVADTTLVWKETVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLP+LR+VEYTPAPVRVYG+FAVEAGTYTFAWQG+DGKTVEKRARFSFTFRR KPGSPQPWTIVEHHSSSMPIAPAELKPV Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDAAYS---------------DQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKLYSVRVFLPVVVGCEFFKVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPV 433
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 553 bits (1426), Expect = 1.380e-188 Identity = 303/469 (64.61%), Postives = 341/469 (72.71%), Query Frame = 1 Query: 28 TLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQ--GTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQL----------------------QDELP-----GIPED------------------GEYSAPA-----GKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV--------------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKP 1236 TL +R +S +AAS +VSL IDWD+ LVD+DVR+LL +Q G +TYAG SN T QG+AFLQ Q+DGLM+EKAQYKEKR+ L+Q ELP +P+ G +PA SP + TEAED++AVA+TT++WK+TVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTF++Q DGA VEKRARFSFTFRRD PG+ +PWTIVEHHSSSMPTAPAGLK V E TPDQKAVAAT +VWKDTVT+GTDD P+KTA LYA DA LWGTVSEEVR+TPEQIY YFD+FARLP LRLVEYTP VRVYG FAV+AGTYTF+WQ +DG TVEKRARFSFTFRRD P PQ W IVEHHSSSMP APA LKP Sbjct: 2 TLPARARQSSVSDEAASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQRXXXXXXXXXXXXXXXXXSVANSSSELPKATPPSLPQTPTNDNSTHSTSRRGSFPLGPRPSPAPGSLRAPSPAKSATEAEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRD-PNKPQQWAIVEHHSSSMPTAPAGLKP 469
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 472 bits (1215), Expect = 7.490e-159 Identity = 235/299 (78.60%), Postives = 256/299 (85.62%), Query Frame = 1 Query: 382 DQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV--------------EITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKP 1236 D++AVA+TT++WK+TVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPEL+VVEYTPVAVRVYGDFA+QAGTYTF++Q DG VEKRARFSFTFRRD PG+ +PWTIVEHHSSSMPTAPAGLK V E TPDQKAVAAT +VWKDTVT+GTDD P+KTA LYA DA LWGTVSEEVR+TPEQIY YFD+FARLP LRLVEYTP VRVYG FAV+AGTYTF+WQ +DG TVEKRARFSFTFRRD P PQ W IVEHHSSSMP APA LKP Sbjct: 27 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRD-PSKPQQWAIVEHHSSSMPTAPAGLKP 324
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: D7FY20_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY20_ECTSI) HSP 1 Score: 364 bits (935), Expect = 8.470e-113 Identity = 193/344 (56.10%), Postives = 244/344 (70.93%), Query Frame = 1 Query: 352 SPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRP-GSPQPWTIVEHHSSSMPTAPAGL-------------KRVEITP--------------DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRD-KPGSPQPWTIVEHHSSSMPIAPAELKPVEPEADMDTIVQAVSEVSVA 1296 +P + E D+KAV+ + W VTSG DAP++TAALYAEDG LW TVSEEV +TP+QI AYF+ FARLP+LR+VEYTPVA RVYG+FA+ AGTYTFA++G DG VEKRARFSFTFRRDR G+P+PW IVEHHSSSMPTAP + V+ TP DQ+AVAA T++W V LGTD+AP+KTAALYA DA LWG+VS+ +R+TP+ IY YFD F+RLPELRLV++ P VRVYG FAV+AGTYTF+W+G+ G +VE++ARF+FTFRRD PG+P W+IVEHH+ P L V D+ + +++++V A Sbjct: 344 TPPRISAEERDKKAVSAAAIAWTNAVTSGARDAPRRTAALYAEDGSLWETVSEEVCNTPQQITAYFERFARLPQLRMVEYTPVAARVYGEFAVLAGTYTFAWRGEDGGPVEKRARFSFTFRRDRTRGAPRPWLIVEHHSSSMPTAPXXXXXXXXXXXXXXXXEPVDPTPPRTKAAKIGNDPNADQRAVAAATVMWTRAVALGTDEAPRKTAALYAKDATLWGSVSDAIRDTPDLIYKYFDKFSRLPELRLVDFAPVTVRVYGDFAVQAGTYTFSWRGEGGASVERQARFTFTFRRDGNPGNPYGWSIVEHHA-----VPVGLSRVSSGVDLADLSKSLADVRSA 682
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 326 bits (836), Expect = 6.890e-100 Identity = 259/692 (37.43%), Postives = 318/692 (45.95%), Query Frame = 1 Query: 55 SNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQ-GTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEYS-----------APAGKSPG-----------------------------VATTEAEDQ------------------------------------------KAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK--RVEITPD-----------------------QKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYD-YFDFFARLPELRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEK-RARFSFTF------RRDKPGSPQPWTIVEHHSSSMPIAPAELK-----------PVEPEADMDTIVQA----VSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSDGQTFKPDTHAVDVTVALGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQD 1701 S +GD+AS++VS+ ID DI LVD+DVR++LA +Q G +YAG S+ T +GRAFL+++LDGLM KA+YKEK+LA LQLQ LP + D E + A GKS G +A E +D ++V++TTL W ETVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAG+YTF++QG DG+TVE RARFSFTFRR P SPQPWTIVEHHSSSMPT+P L+ RV + + + + I+ F F PA V A EA T T + +D + E+ RA R AE K P PE++ V+A VS +VA E S D K D+T +G GLGL+LG+E+ G+RW VKGFR MPDG+PNPA A GIEVGDTLQKL GV LGSYKDG+E+FKKQ G VV+T+ RQ+ Sbjct: 16 SGIGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDGEVREVLGALQGKSEGSPYAGKSKDVLEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKPQQPQEKTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVAS--APEAKTMTAEEEAEDARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLQTPPAPESEHHEEVRASSSAVSSSAVA----------------------------RELSFDGTGAG-----KDKAKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 672
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.300e-61 Identity = 111/160 (69.38%), Postives = 124/160 (77.50%), Query Frame = 1 Query: 325 GEYSAPAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRV 804 G + P +S G A TE D+K V TT+ WKE VT GT DAP+KTA LYA DGVLWGTVSEEVRDTPE+IY YFDYFARLP LR+ E+TPV++RVYGDFA +AGTYTF +QG DG EKRARFSFTFR D P SP WTIVEHHSSSMPT+P LK V Sbjct: 85 GLTAVPVTRSAGAAVTEG-DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSD-PESPTSWTIVEHHSSSMPTSPLQLKHV 242 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig103.253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig103.253.1 >prot_E-siliculosus-1a_F_contig103.253.1 ID=prot_E-siliculosus-1a_F_contig103.253.1|Name=mRNA_E-siliculosus-1a_F_contig103.253.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=572bp MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAback to top mRNA from alignment at E-siliculosus-1a_F_contig103:75618..86998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig103.253.1 ID=mRNA_E-siliculosus-1a_F_contig103.253.1|Name=mRNA_E-siliculosus-1a_F_contig103.253.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11381bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig103:75618..86998+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig103:75618..86998+ >mRNA_E-siliculosus-1a_F_contig103.253.1 ID=mRNA_E-siliculosus-1a_F_contig103.253.1|Name=mRNA_E-siliculosus-1a_F_contig103.253.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3432bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig103:75618..86998+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |