mRNA_E-siliculosus-1a_F_contig103.249.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 1082 bits (2799), Expect = 0.000e+0 Identity = 574/603 (95.19%), Postives = 584/603 (96.85%), Query Frame = 3 Query: 378 MDRSRMSTNAFERVSRVASRPEDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKNETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRVAKYAERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPAPAEPSSAA-VPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQEAMPKKIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAFAEDVNHHPVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGRPNPAEAAGIEVGDTLRQVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEVLI 2183 MDRSRMSTNAFERVSRVAS +DAESIAVSLGATDLDIELVDNEVRRALAAIHGTK ETYAGRTN+TAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKR AKYAER EA AXXXXXXXXXXXXXX ATGGFLSSLKNMIISPAPAEPS AA VPTPEEDR+AVADTTLVWKETVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRR PGS RPWTIVEHHSSSMPTAPAGLKRVGQ+AMPKKIVK ITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYG+FAVQAGTYTFAWEGDDGDT EKRARFSFTFRR KPGSP+PWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAF EDVNHH VDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDG+PNPAEAAGIEVGDTL++VGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDE+LI Sbjct: 1 MDRSRMSTNAFERVSRVASGAKDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKKETYAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRAAKYAERREAPAXXXXXXXXXXXXXXPAATGGFLSSLKNMIISPAPAEPSPAATVPTPEEDRQAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLKRVGQDAMPKKIVKEITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAFTEDVNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEILI 603
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 753 bits (1944), Expect = 2.930e-263 Identity = 420/631 (66.56%), Postives = 463/631 (73.38%), Query Frame = 3 Query: 378 MDRSRMSTNAFERVSRVASRPEDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKNETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRVAKYAERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPAPAEPSSAAVPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQEA-----MPKKIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSS------------------------VSSSTLPPSPPPRKGQAMAAFAEDVNHHPVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGRPNPAEAAGIEVGDTLRQVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEVLI 2183 M+R RM T +RVSR+AS DA SI+VSLG D DI+LVD +VR+ LAA+ GT +TYAG +N+T G ++L+KQL+ LMKEKAQ+KEK+LAL QLQ ELP PE APA S T ED+KAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQG DG TVEKRARFSFTFRRD PGS +PWTIVEHHSSSMPTAPAGLKRVG A PKK+ ITPDQKAVA TTIVWKDTVTLGTDDAPKKTAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EYTPAPVRVYGQFAV+AGTYTFAW+GDDG T EKRARFSFTFRRDKPGSPQPWTIVEHHSSSMP APAELK VEPE D +D + QAV+++S S P +GQ F D H VDVT ++G GLGLVLGKEE G+RW V GFR MPDG+PNPA A GIEVGDTL+++ GV LG+YK+G+E+FKK G VV+TV RQ DE+ I Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELP-------GIPEDGEYS------------------------------APAGKSPGVATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGPNADLVKVTPKKVE--ITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVD-MDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSEGQ---TFKPDT--HAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQ-DEITI 585
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 694 bits (1790), Expect = 9.180e-240 Identity = 391/635 (61.57%), Postives = 449/635 (70.71%), Query Frame = 3 Query: 378 MDRSRMSTNAFERVSRVASRPEDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKN-ETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRVAKYAERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPAPAEPSSAAVPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQEAMPKKIVKV------ITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELKHVEPE-----DDGIDYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAFAEDVNH---------------------HPVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGRPNPAEAAGIEVGDTLRQVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEVLI 2183 M+R+RM T+ +RVSR+AS DA SI VSLGA + DI+LVD +VR+ L+ + G +TYAG +N+T G ++LKKQL+ LM EKAQ+KEK+LAL QLQQELP E E AA +P P P+ A PT EED+ AVA TT+VWK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELR+VEYTPVAVRVYGDFAVQAGTYTFAFQG DG TVEKRARFSFTFRRD+P S PWTIVEHHSSSMP APAGLKRVG A ++VKV +TP+ KA +ETTIVWKDTVTLGT+DAPKKT+ALY DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EY+PAP RVYGQFAVQAGTYTFAW+G+D +T EKRARFSFTFRRD P SP PWTIVEHHSSSMP APA LK VE + D+ + A AV + P A E + HPVDVT VGS GLG++LG+E++GTRW V GFR+MPDG PAE AG+EVGDTL+++ GV LG+YKEG+ +FKK G LT+ RQ DE+ I Sbjct: 1 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPN----LEEDEEYAAG-----------------------------APEPEAPAPPAAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRVGPNA---ELVKVTPKELEVTPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDPAAVMDEVVVEDAPAVVAAEEPXXXXXXXXAEAEPDVVXXXXXAAEEPASEEAEEVPDFSVVPDEEPFVPPTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQ-DEITI 598
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 691 bits (1782), Expect = 1.920e-224 Identity = 397/644 (61.65%), Postives = 445/644 (69.10%), Query Frame = 3 Query: 378 MDRSRMSTNAFERVSRVASRPEDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKN-ETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRVAKYAERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPAPAEPSSAAVPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQEA-----MPKKIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELKHVEPEDDGI--DYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAFAE-DV---------------------------------NHHPVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGRPNPAEAAGIEVGDTLRQVGGVPLGTYKEGIELFKKLRGPVVLTVCRQNDEVLI 2183 M+R+RM T+ +RVSR+AS DA SI VSLGA + DI+LVD +VR+ L+ + G +TYAG +N+T G ++LKKQL+ LM EKAQ+KEK+LAL QLQQELPK E E AA D+ AVA TT++WK+TVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQG DG TVEKRARFSFTFRRD+PGS PWTIVEHHSSSMP APAGLKRVG A PKK+ ITPD KAV+ETTIVWK+TVTLGT+DAPKKTAALYA DAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRL+EYTPAP RVYGQFAVQAGTYTFAW+G+DG+T EKRARFSFTFRRD P SP PWTIVEHHSSSMP AP LK VE + + D V + + A P P AA AE DV HPVDVT VGS GLGLVLG+E++GTRW V GFR+MPDG PAE AG+EVGDTL+++ GV LG+YKEG+ +FKK G LTV RQ DE+ I Sbjct: 1144 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPK----LQEDEEYAA-----------------------------------------------DKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRVGPNAELVKVTPKKLE--ITPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEE-------PEEPAVVADEPAAEAEPDVVXXXXXXXXXXXXXXXXEVPDFSVVPDEEPFVPTTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQ-DEITI 1726
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 615 bits (1587), Expect = 2.490e-211 Identity = 335/487 (68.79%), Postives = 364/487 (74.74%), Query Frame = 3 Query: 378 MDRSRMSTNAFERVSRVASRPEDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKNETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRVAKYAERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPAPAEPSSAAVPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQ--------------------------EAMPKKIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELKHV 1760 M+R RM T +RVSR+AS DA SI+VSLG D DI+LVD +VR+ LAA+ GT +TYAG +N+T G ++L+KQL+ LMKEKAQ+KEK+LAL QLQ ELP PE AA D+KAVADTTLVWKETVTSGTYDAPKKTAALYAED VLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFA+QAGTYTFAFQG DG TVEKRARFSFTFRRD PGS +PWTIVEHHSSSMPTAPAGLKRVG+ + PKK+ ITPDQKAVA TTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLR++EYTPAPVRVYG+FAV+AGTYTFAW+G+DG T EKRARFSFTFRR KPGSPQPWTIVEHHSSSMP APAELK V Sbjct: 1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELP-------GIPEDAAY---------------------------------------------SDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKLYSVRVFLPVVVGCEFFKVGPNADLVKVTPKKVE--ITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPV 433
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 534 bits (1375), Expect = 1.680e-176 Identity = 297/464 (64.01%), Postives = 339/464 (73.06%), Query Frame = 3 Query: 423 RVASRPEDAESIAVSLGATDLDIELVDNEVRRALAAIH--GTKNETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQ-----------LQQELPKRVAKYA-ERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPAPAE---PSSAAVPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQ-EAMPK--KIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELK 1754 R +S ++A S AVSL A D D+ LVD +VRR L + G + +TYAGR+N T G ++L+ Q++ LM+EKAQ+KEK++ L Q VA + E P+A + G S SPAP PS A T EDR+AVA+TT++WK+TVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTF++Q DG VEKRARFSFTFRRDNPG+ RPWTIVEHHSSSMPTAPAGLK VG +P+ K+VK TPDQKAVA T +VWKDTVT+GTDD P+KTA LYA DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL+EYTP VRVYG FAVQAGTYTF+W+ +DGDT EKRARFSFTFRRD P PQ W IVEHHSSSMP APA LK Sbjct: 8 RQSSVSDEAASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQRXXXXXXXXXXXXXXXXXSVANSSSELPKATPPSLPQTPTNDNSTHSTSRRG--SFPLGPRPSPAPGSLRAPSPAKSATEAEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRD-PNKPQQWAIVEHHSSSMPTAPAGLK 468
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 482 bits (1241), Expect = 1.450e-158 Identity = 240/301 (79.73%), Postives = 263/301 (87.38%), Query Frame = 3 Query: 861 PEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLKRVGQ-EAMPK--KIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELK 1754 P+ DR+AVA+TT++WK+TVTSGTYDAPKKTAALYA DG LWGTVSEEVRDTP+QIYAYFDYFARLPEL+VVEYTPVAVRVYGDFAVQAGTYTF++Q DG VEKRARFSFTFRRDNPG+ RPWTIVEHHSSSMPTAPAGLK VG +P+ K+VK TPDQKAVA T +VWKDTVT+GTDD P+KTA LYA DA LWGTVSEEVR+TPEQIY YFD+FARLP LRL+EYTP VRVYG FAVQAGTYTF+W+ +DG T EKRARFSFTFRRD P PQ W IVEHHSSSMP APA LK Sbjct: 24 PKLDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGVGPGIPRGPKVVKETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRD-PSKPQQWAIVEHHSSSMPTAPAGLK 323
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: D7FY20_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY20_ECTSI) HSP 1 Score: 359 bits (921), Expect = 3.980e-107 Identity = 184/324 (56.79%), Postives = 230/324 (70.99%), Query Frame = 3 Query: 804 KNMIISPAPAEPSSAAVPTPEEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNP-GSARPWTIVEHHSSSMPTAPAGLKRVGQEAMPKKIVKVITP----------------DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRD-KPGSPQPWTIVEHHS 1721 ++++ PA P+ + E D+KAV+ + W VTSG DAP++TAALYAEDG LW TVSEEV +TP+QI AYF+ FARLP+LR+VEYTPVA RVYG+FAV AGTYTFA++G DG VEKRARFSFTFRRD G+ RPW IVEHHSSSMPTAP + + P DQ+AVA T++W V LGTD+AP+KTAALYA DA LWG+VS+ +R+TP+ IY YFD F+RLP+LRL+++ P VRVYG FAVQAGTYTF+W G+ G + E++ARF+FTFRRD PG+P W+IVEHH+ Sbjct: 332 RSVVRPPALRTPTPPRISAEERDKKAVSAAAIAWTNAVTSGARDAPRRTAALYAEDGSLWETVSEEVCNTPQQITAYFERFARLPQLRMVEYTPVAARVYGEFAVLAGTYTFAWRGEDGGPVEKRARFSFTFRRDRTRGAPRPWLIVEHHSSSMPTAPXXXXXXXXXXXXXXXXEPVDPTPPRTKAAKIGNDPNADQRAVAAATVMWTRAVALGTDEAPRKTAALYAKDATLWGSVSDAIRDTPDLIYKYFDKFSRLPELRLVDFAPVTVRVYGDFAVQAGTYTFSWRGEGGASVERQARFTFTFRRDGNPGNPYGWSIVEHHA 655
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 327 bits (838), Expect = 8.380e-97 Identity = 251/657 (38.20%), Postives = 318/657 (48.40%), Query Frame = 3 Query: 444 DAESIAVSLGATDLDIELVDNEVRRALAAIH-GTKNETYAGRTNDTAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELP--------KRV-----------------AKYAERPEAAAXXXXXXXXXXXXXXXXATGGFLSSLKNMIISPA------PAEP---------SSAAVPTP-----EEDRKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRDNPGSARPWTIVEHHSSSMPTAPAGLK--RVGQEA------------MPKKIVKVITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYD-YFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDT-EEKRARFSFTF------RRDKPGSPQPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPPSPPPRK--GQAMAAFAEDVNHHPVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGRPNPAEAAGIEVGDTLRQVGGVPLGTYKEGIELFKKLRGPVVLTVCRQN 2168 D+ S+AVS+ A DLDI LVD +VR LA + G + +YAG ++ T G ++L+++L+ LM KA++KEKKLA QLQ+ LP RV + YA + + L + + +P P +P + A+ +P EE+ ++V++TTL W ETVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAG+YTF++QG DG TVE RARFSFTFRR P S +PWTIVEHHSSSMPT+P L+ RVG + + I+ F F PA V A +A T T E +D E+ RA R AE K G+ ++ SSS + S R+ A + H D+TA VG GLGL+LG+E++GTRWVV GFR MPDG+PNPAEAAGIEVGDTL+++GGVPLG+YK+GIE+FKK RGPVVLT+ RQN Sbjct: 20 DSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDGEVREVLGALQGKSEGSPYAGKSKDVLEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKPQQPQEKTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVAS--APEAKTMTAEEEAEDARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLQTPPAPESEHHEEVRASSSAVSSSAVARELSFDGTGAGKDKAKIH--DITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 672
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 211 bits (538), Expect = 3.810e-59 Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 3 Query: 1338 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGQFAVQAGTYTFAWEGDDGDTEEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPDAPAELKHV 1760 D+K V +TTI WK+ VTLGT DAP+KTA LYA D VLWGTVSEEVR+TPE+IYDYFD+FARLP LRL E+TP +RVYG FA +AGTYTF W+G+DG +EKRARFSFTFR D P SP WTIVEHHSSSMP +P +LKHV Sbjct: 103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSD-PESPTSWTIVEHHSSSMPTSPLQLKHV 242 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig103.249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig103.249.1 >prot_E-siliculosus-1a_F_contig103.249.1 ID=prot_E-siliculosus-1a_F_contig103.249.1|Name=mRNA_E-siliculosus-1a_F_contig103.249.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=603bp MDRSRMSTNAFERVSRVASRPEDAESIAVSLGATDLDIELVDNEVRRALAback to top mRNA from alignment at E-siliculosus-1a_F_contig103:27046..35626- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig103.249.1 ID=mRNA_E-siliculosus-1a_F_contig103.249.1|Name=mRNA_E-siliculosus-1a_F_contig103.249.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8581bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig103:27046..35626- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig103:27046..35626- >mRNA_E-siliculosus-1a_F_contig103.249.1 ID=mRNA_E-siliculosus-1a_F_contig103.249.1|Name=mRNA_E-siliculosus-1a_F_contig103.249.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3618bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig103:27046..35626- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |