mRNA_E-siliculosus-1a_F_contig1026.229.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A6H5KDR8_9PHAE (Peptidase_M14 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDR8_9PHAE) HSP 1 Score: 469 bits (1206), Expect = 4.730e-160 Identity = 218/231 (94.37%), Postives = 228/231 (98.70%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGVCDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQWGPFDVETEENGGTKVVIADEKHGVDMEWTVGGSFEVDATQV 693
SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQD +GNWLDISPDHEAQKELTAGLSQFAGGFKE+GRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGVC+P VNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQ+LLGSRQGLLGHTPS+EEHGNGHVARN+RL+LMAVDLVEPYVQWGPFDVETEENG TKV++ADEKHGVDMEWTVGGSFEVDATQ+
Sbjct: 159 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDRKGNWLDISPDHEAQKELTAGLSQFAGGFKENGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGVCEPGVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQALLGSRQGLLGHTPSEEEHGNGHVARNIRLALMAVDLVEPYVQWGPFDVETEENGSTKVLVADEKHGVDMEWTVGGSFEVDATQL 389
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A1E7FSF6_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSF6_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.040e-53 Identity = 112/247 (45.34%), Postives = 149/247 (60.32%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLD-ISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV-CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQWGPFD-----------VETEENG--GTK-VVIADEKHGVDMEWTVGGSFEVDATQV 693
+ NE++REH FQLA+TFH GM +AYEWGSP +WLD +SPD EAQ + S++ G+ KPY G MN+ VY V GGMEDWAYAGSW K C P G YPKEKTIY+++ LR N+LVE SN K P +S LG+ +L S++ GNGHV+RN+RL+L+A D+VEPYV + E + N TK V++A VD+EW+VGG+ +D+T++
Sbjct: 260 TANEIYREHMFQLALTFHAGMEVVAYEWGSP----------SWLDHLSPDDEAQAAIGGAYSRYGAGWSNS----KPYEYGTMNDEVYFVRGGMEDWAYAGSWTPDKVTPCTPTQFGGYPKEKTIYNNSTLRVFNVLVETSNSKEP-KSDLGNSADIL----SRDTKGNGHVSRNIRLALLAADMVEPYVTVVGVNKLALTDDIVSMTERKSNSCLDTKAVMVAKNAKMVDIEWSVGGAMTIDSTEL 487
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A448ZCG5_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCG5_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.410e-52 Identity = 111/247 (44.94%), Postives = 143/247 (57.89%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLD-ISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV-CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQWGPFD-----------VETEENG---GTKVVIADEKHGVDMEWTVGGSFEVDATQV 693
+ NE++REH FQLA+TFHGGM +AYEWG+P ++LD SPDHEAQ ++ S++ GG+ T PY G MN+ VY V GGMEDWAY GSW K C P G YP+EKT+Y+++ LR N+LVE SN K P L S L G T GNGHV+RN+RLSL+A D+VEPY + E NG V++A VD+EWTVGG+ +D+TQ+
Sbjct: 269 TANEIYREHMFQLALTFHGGMEVVAYEWGAP----------SFLDHFSPDHEAQVQIGGAYSRYGGGWS----TSHPYQHGTMNDEVYYVRGGMEDWAYGGSWTPEKVTPCTPKEFGGYPREKTVYNNSTLRVFNMLVETSNAKEPKHHLGSSLDVLNGDTA-----GNGHVSRNIRLSLLAADMVEPYAAIVGVNKLALTDDVVPMAPREPNGCMDTRAVMVAQNAETVDIEWTVGGAVTIDSTQL 496
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A7S3QIR2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIR2_9STRA) HSP 1 Score: 187 bits (476), Expect = 9.260e-52 Identity = 108/246 (43.90%), Postives = 152/246 (61.79%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGK-GVCDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQ-WG-----------PFDVETEE-NGGTKVV-IADEKHGVDMEWTVGGSFEVDATQV 693
+VNE++R+H FQ+++TFHGG + YEWG+ + H +SPD +AQ ++++ S+FAG F+ KPYPTG MN+LVY V GGMEDWAYAGSW K +C P G Y + K++Y+ +MLRA N+L+E SN K P Q+ LG+ Q LL T S NGHVARN+RL+LMA++LVEPY+ WG P T + +KV+ I ++ + + W VGG F+V +T +
Sbjct: 248 TVNELFRQHLFQMSLTFHGGTEVVGYEWGAYPYLHN---------LSPDDKAQVDISSIYSRFAGSFQGT----KPYPTGTMNDLVYAVHGGMEDWAYAGSWIPDKVPICKPKTYGGYSETKSVYNDSMLRAFNMLIETSNQKIP-QTHLGTSQDLLDDTSSTH---NGHVARNIRLALMAIELVEPYISIWGVDYIPLENDIVPMTTHTSRASKRSKVMQIPGDRQEITVSWFVGGGFDVASTNI 476
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A7S2RZJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZJ4_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.040e-51 Identity = 103/233 (44.21%), Postives = 143/233 (61.37%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV-CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQWGPF-DVETEENGGTKVVIADEKHGVDMEWTVGGSFEVDATQV 693
++NE++++H FQL++TFH GM +AYEWGSP + G L SPDH AQ E+ + SQ+ G +K+ Y G MN VYPV GGMEDWAYA SW K + C P G YP E T+Y+++ R N+LVEAS K P ++ LG Q L K NGH+ARNVRLSL+A++LV+PY+Q+ DV + K++I V++ W+VGG+F VD+T++
Sbjct: 249 TINEIYKKHMFQLSLTFHAGMEVVAYEWGSPSY-------GKLL--SPDHIAQAEIASSYSQYGGSWKQSSN----YQVGTMNREVYPVRGGMEDWAYAASWDTDKVIRCQPTQYGGYPLESTMYTNSTHRTFNMLVEASQSKTPLKNQLGYSQHYLAGFDRKT---NGHIARNVRLSLLAIELVQPYLQFQTANDVPITKLQQYKMIIPPSLSSVNIVWSVGGAFTVDSTRL 465
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A8K1CMJ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMJ5_PYTOL) HSP 1 Score: 184 bits (467), Expect = 1.080e-51 Identity = 109/242 (45.04%), Postives = 136/242 (56.20%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGK------GVCDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLG-----SRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQWGPFDVETEENGGTKVVIADEKHGVDMEWTVGGSFEVDATQV 693
+VNEVWR+H FQLA+TFHGG ++YEWGS +H + G D SPDH+ Q + GLS+F G F E G YP G MN++VY V GGMEDWAYA SW GVC P+ G YP K+ Y+ A R+ NIL+E SN K P +S LG S L P+ + G HV RNVR++LM +DLV+PYVQW +NG DE V W V G+ VD T +
Sbjct: 189 AVNEVWRDHLFQLAITFHGGTQSVSYEWGSTNH----ELPGGGSDKSPDHQGQWYMGRGLSRFGGKFSEGGY----YPDGPMNDIVYAVNGGMEDWAYAASWENAYTTPKPVGVCQPSTYGGYPAAKSNYNDATHRSFNILIETSNSKQPTESSLGNDASLSDAALADFLPATQTIG--HVPRNVRIALMYIDLVQPYVQW--------KNGTESSRAGDE---VTFNWEVLGAVTVDDTHL 409
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: K3WED6_GLOUD (Peptidase_M14 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WED6_GLOUD) HSP 1 Score: 184 bits (467), Expect = 1.130e-50 Identity = 100/203 (49.26%), Postives = 129/203 (63.55%), Query Frame = 1 Query: 4 VNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV----------CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGL----LGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQW 570
VNE+WREH FQLA+TFHGGM ++YEWGSPDH + +G+ + + SPDH AQ +L LS +AG F DG YPTG MN++VY V GGMEDW YA SW E K + C P G YP EKTIY++ RA N+LVE SN KHP +S LG+ + L L + GHV +NVRL+LM +++V+PY++W
Sbjct: 214 VNEIWREHIFQLAITFHGGMRAVSYEWGSPDHYLKNNGQRS--EKSPDHLAQFQLANLLSTYAGAFP-DGNL---YPTGTMNDIVYGVTGGMEDWGYAASW-ENKFIDAYDDQPFKPCSPKTFGGYPTEKTIYNNITHRAFNMLVETSNNKHPDESTLGNFEDLYTTELDYFRPVAGFQAGHVTQNVRLALMMIEMVQPYIRW 409
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A067CFQ8_SAPPC (Peptidase_M14 domain-containing protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CFQ8_SAPPC) HSP 1 Score: 182 bits (463), Expect = 2.580e-50 Identity = 106/255 (41.57%), Postives = 145/255 (56.86%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV------CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHG---NGHVARNVRLSLMAVDLVEPYVQW---------------GPFDVETEENGGTKVVIADEKHGVDMEWTVGGSFEVDATQV 693
+VNEVWR+H FQLA+TFHGGM + YEWGSP+H + SPD +Q +L L++FAG F + YPTG MN++VY V GGMEDWAYA SW C P+ G YP EKT+Y++A RA NILVE SN K P S LG+++ + ++ ++ GHV +N+RL L+ +D+V+PYV+W G DV + GG +++ + + W V GSF+VDAT V
Sbjct: 193 AVNEVWRDHLFQLAMTFHGGMRCVTYEWGSPNHM-----TSGRSERSPDDTSQVQLGDALARFAGPFADGAY----YPTGTMNDVVYGVYGGMEDWAYAASWENALAAEPVFTPCTPSQYGGYPAEKTVYNNATHRAFNILVETSNAKQPSASSLGAKRAI--YSADLQDLAIAPEGHVPQNIRLGLLLIDMVQPYVRWLATTSEWNRVAAPTAGSGDVVVDCLGGDDCLVSAATTHLRVGWEVLGSFQVDATFV 436
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: B7G3L4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3L4_PHATC) HSP 1 Score: 184 bits (467), Expect = 3.570e-50 Identity = 108/246 (43.90%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV-CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTPSKEEHGNGHVARNVRLSLMAVDLVEPYVQWGPF-------DVET--EENG----GTKVV-IADEKHGVDMEWTVGGSFEVDATQV 693
++NEV+REH FQLA+TFHGGM + YEWG+P ++ SPD AQ+E+ S++AGG+ + Y G MN+LVYPV GGMEDWAYAGSW + + C P G YP+ KT+Y ++ LR N+LVE SN K P + LG+ +L + + GNGHV+RN+RL+L++ DLV+PYV DV + E+G GT+ V I+ E+ V +EWTVGG+ + TQV
Sbjct: 303 TLNEVYREHLFQLALTFHGGMEAIGYEWGAPTWKSKK---------SPDDLAQQEIADAYSRYAGGWFGT----RNYQYGPMNDLVYPVRGGMEDWAYAGSWDTDRVIACRPTTFGGYPEAKTVYDNSTLRVFNMLVETSNDKTPLKDQLGTSLDVL----NSDTTGNGHVSRNIRLALLSADLVQPYVTLQRVNDLHLSDDVVSLSREDGHSCQGTRTVTISSERPTVTLEWTVGGALQTHETQV 531
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Match: A0A7S4T8C6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8C6_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.230e-49 Identity = 106/247 (42.91%), Postives = 148/247 (59.92%), Query Frame = 1 Query: 1 SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHEAQKELTAGLSQFAGGFKEDGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGV-CDPAVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQSLLGSRQGLLGHTP-SKEEHGNGHVARNVRLSLMAVDLVEPYVQWG------------PFDVETEENGG--TKVVIADEKHGVDMEWTVGGSFEVDATQV 693
++NE++REH FQL++TFHGGM +AYEWG+P + +W+ SPD EAQ ++ S++AGGF GR +PY TG MN++VY V GGMEDWAYAGS+ + + C P G YPKE+TIY + LR N+LVE S+ K P + LG+ H P + GNGH++RN+RL+L+A+DLV+PYV P + + K++I + +EWTVGG+ VD T V
Sbjct: 271 TINELFREHLFQLSITFHGGMEAIAYEWGAPSYL-------DWM--SPDDEAQAQIANAYSRYAGGF---GR-HRPYQTGTMNDVVYFVRGGMEDWAYAGSFDPDRVIPCQPEQYGGYPKERTIYDESTLRTFNMLVETSDVKSPVRDDLGTS-----HDPFNTNSQGNGHISRNIRLALLALDLVQPYVSIVGANGLALRDDVVPLTYRGDRSCAYTKKIMIPPGLNDTLIEWTVGGAMSVDFTTV 499 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1026.229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1026.229.1 >prot_E-siliculosus-1a_F_contig1026.229.1 ID=prot_E-siliculosus-1a_F_contig1026.229.1|Name=mRNA_E-siliculosus-1a_F_contig1026.229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=231bp SVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDGEGNWLDISPDHback to top mRNA from alignment at E-siliculosus-1a_F_contig1026:32519..38643+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1026.229.1 ID=mRNA_E-siliculosus-1a_F_contig1026.229.1|Name=mRNA_E-siliculosus-1a_F_contig1026.229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6125bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1026:32519..38643+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1026:32519..38643+ >mRNA_E-siliculosus-1a_F_contig1026.229.1 ID=mRNA_E-siliculosus-1a_F_contig1026.229.1|Name=mRNA_E-siliculosus-1a_F_contig1026.229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1026:32519..38643+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |