mRNA_E-siliculosus-1a_F_contig1026.228.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A6H5KDR8_9PHAE (Peptidase_M14 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDR8_9PHAE) HSP 1 Score: 317 bits (812), Expect = 2.560e-101 Identity = 146/156 (93.59%), Postives = 154/156 (98.72%), Query Frame = 1 Query: 145 LAQVYSAQYRYGLRSPGPCSEDGSMKCEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQNCMTTITARQ 612
+ QVYSAQYR+GLRSPGPCSEDGS++CEQWVLHISDHNT+ AEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALR+APESVPWLARLALTRSTVIMPMANS+GYYNTDRWENGMDPNRDFPYGQMPQ+CMTTITARQ
Sbjct: 1 MQQVYSAQYRFGLRSPGPCSEDGSIRCEQWVLHISDHNTMAAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALRDAPESVPWLARLALTRSTVIMPMANSIGYYNTDRWENGMDPNRDFPYGQMPQHCMTTITARQ 156
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A836CRP5_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRP5_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.540e-42 Identity = 83/174 (47.70%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 79 FETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPGPCSEDGSMKCEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVC-HADSSAKECDDDAL--REAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQNCM 591
++ +Y I ++ +A YP +VYSAQ RYG+ SPG C G C+QWVLHI+D TLE + +RPEVFFSGCLHGDE VGP ++E A L++ AA C + A +C D L V WL+RL TRS MP N++G+Y R E+G+DPNRDFPY Q + CM
Sbjct: 32 YKLRTYAGIEQELEAMAKAYPDYVEVYSAQDRYGIDSPGDC---GEKPCQQWVLHITDLATLEEDVQRPEVFFSGCLHGDEVVGPPTLMETAWLLLRAAACARSGGGAADCRDPTLSGEAGARRVRWLSRLVATRSLWAMPATNALGFYRGRREESGIDPNRDFPYHQDAEQCM 202
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A2R5GMQ1_9STRA (Carboxypeptidase D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMQ1_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.570e-38 Identity = 84/183 (45.90%), Postives = 108/183 (59.02%), Query Frame = 1 Query: 67 PDNQFETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPGPCSEDGSMKCEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQNCMTTITARQV 615
P + L Y IV ++H L +YP L ++Y AQ RY L SPG C G+ C+Q+VL I++ TL EPERPEVFFSG LHG+E+VGPT ++E A+L++ S C + WL RL TRS IMP N++GYY R EN +DPNRDFP + P +CM TI AR V
Sbjct: 55 PFRTVKYLDYGDIVDELHRLEKDYPDLVELYDAQARYNLPSPGRCGSHGN--CKQYVLRITNEATL-PEPERPEVFFSGELHGNERVGPTTLMEFARLLL--------ESYTTCSN----------AWLQRLVNTRSIYIMPTTNALGYYRNTRTENTIDPNRDFPIDK-PHSCMETIAARAV 215
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A7S3UYK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UYK6_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.180e-35 Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 136 YPHLAQVYSAQYRYGLRSPGPCSEDGSMKCEQWVLHISDHNTL--------EAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQN-CMTTITARQV 615
YPHL +V AQ RYG++SPG C G+ C+QW++ I++ TL + E +RPEVFFSG LHG+E+VGP+ +V KL++ + + +E P PWL L TRS IMPM N++GYY R E+ +DPNRDFP N CM TITAR V
Sbjct: 2 YPHLVEVTDAQSRYGIKSPGEC---GANPCKQWIVRITNEKTLSKSESSTKDNESQRPEVFFSGELHGNERVGPSTLVVFMKLLL--------------ESYSRKENPN--PWLKYLVDTRSIYIMPMTNALGYYQNRREEHNIDPNRDFPIDLSQSNLCMRTITARAV 151
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A1E7ENZ9_9STRA (Zn-dependent exopeptidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ENZ9_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.780e-34 Identity = 85/202 (42.08%), Postives = 111/202 (54.95%), Query Frame = 1 Query: 70 DNQFETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPGPCSEDGSMKCEQWVLHISD-----HNTLEAE---PERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAP--ESVPWLARLALTRSTVIMPMANSMGYYNTDRWEN----------GMDPNRDFPYGQMPQNCMTTITARQV 615
+ + LS D IV ++ LAT Y ++Q RYGL S P S + C +L I+D H + E + RP+VF SG LHGDE+VGP A+V +A L+V AA C A + D DAL+E+ E+V WLARL TR ++P NS GYY R E+ G+DPNRDFPY Q P CM +ITAR +
Sbjct: 35 EESYIRLSLDEIVDEMQSLATKYSQFVTYDTSQNRYGLPSTCPSSSSQNTGCYNHLLIIADPIIYSHKSGEGQLALQHRPDVFLSGALHGDERVGPVALVHVATLLVKAASCQAKLTVAGNDCDALKESLGIENVAWLARLVSTRRIFVVPTPNSSGYYLEQRNEDYTKPNGQSTSGIDPNRDFPYNQAPSQCMKSITARTI 236
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A7S2RZJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZJ4_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.960e-33 Identity = 80/189 (42.33%), Postives = 111/189 (58.73%), Query Frame = 1 Query: 76 QFETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPG-----PCSEDGSMKCEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVP---WLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYG-QMPQNCMTTITARQV 615
+++ L + IV ++H LA NYP A + S+Q +GL G P +DG C+ W L IS + + PEVF SGC+HG+E+VGPTAV+E A L++ +A C + S + C L E+ S W+ARL TR VI+P AN++GYY R ENG+DPNRDFP+ + P CM TI R +
Sbjct: 67 KYQLLDSEEIVSRLHWLADNYPKFATLESSQDSFGLPVAGTEQDCPFEKDGKG-CKNWFLTISGSDE---DNNLPEVFLSGCVHGNERVGPTAVMETATLLLESAACELNYS-EACRASLLTESDISDKERLWMARLVQTRRIVIVPTANALGYYQNVREENGVDPNRDFPFEVEDPSKCMQTIAGRTI 250
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A7S1UCR6_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCR6_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.410e-33 Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 1 Query: 31 LCLAGLSGGDDLPDNQFETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPGPCSEDGSMKCEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDD--DALREAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQN--CMTTITARQV 615
L L +G F+ LSY I ++ LA YP A + +AQ RYG+ + G C G CEQ++L +S + + PE PE F SG +HG+E+VGP A +E ++L+VY A C + ++C+ + A E WL R TR+ +MPM N++GYY R ENG+DPNRDFPY P+ CM +ITAR +
Sbjct: 19 LLLGLAAGAAHAKARHFKNLSYPEIRERLRTLAAKYPQYATLTTAQERYGVGTAGEC---GDGPCEQFILRLSGVSEEDQPPEMPEGFVSGEVHGNERVGPVAALEASELLVYTAACVDTGAHEDCNKIVEYGLTARERA-WLHRTIHTRALYVMPMTNALGYYLNTREENGVDPNRDFPY-DYPEGHRCMRSITARSL 212
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A2D4CIB4_PYTIN (Peptidase_M14 domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIB4_PYTIN) HSP 1 Score: 135 bits (340), Expect = 3.590e-33 Identity = 79/200 (39.50%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 31 LCLAGLSGGDDLPDNQFETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPGPCS---EDGSMK-CEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVP-WLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQNCMTTITARQV 615
LC + LS P F SY +V +H L+T YP L +V A+ Y L +P G+M+ C +V+H+++H+TL ++P RPEVFFSG LHGDE+VGPT VE+ L+ +A +A ++A+ E P + WL L TRS V+ PM N+ GY + R E +DPNRD+ Y CM +T+R V
Sbjct: 17 LCSSALSAS---PKGPFRYRSYGEMVAFLHXLSTTYPELVRVSIAEETYNLPTPRELQCLGTHGAMEPCRHYVVHLTNHSTLASDPSRPEVFFSGALHGDERVGPTTTVELIALIASSATAYAKGP-----NEAIAEPPLTTQRWLHELVNTRSIVLTPMTNAYGYAHEKREELDIDPNRDYNYLAKGPECMQAMTSRVV 208
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A024TFI0_9STRA (Peptidase_M14 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFI0_9STRA) HSP 1 Score: 132 bits (332), Expect = 3.400e-32 Identity = 80/197 (40.61%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 37 LAGLSGGDDLPDNQFETLSYDTIVYQIHLLATNYPHLAQVYSAQYRYGLRSPGP--CSEDG--SMKCEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQNCMTTITARQV 615
LA S G PD F+ +Y+ +V + L ++P + ++ AQ +YGL P C E+ ++ C+Q+VL I++ +T + + RPEVFFSG LHG+E+VGP A +E+A L+V A A S + R S WL RL +RS +MPM NS GYY+ R ENG+DPNRD+ Y + NCM +T+R V
Sbjct: 15 LAHGSAGSGDPDAMFQYRTYEEMVQTMMALNASHPDVVDLFVAQDKYGLPYPTDLQCGEEHGVAVPCKQYVLRITNESTWDGD--RPEVFFSGALHGNERVGPQATMELALLLVDYATSFAAGSTSSDSTNVRR----SKAWLHRLVNSRSIYMMPMTNSHGYYHNKREENGVDPNRDYNY-KTNGNCMQAMTSRAV 204
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Match: A0A7S0LY62_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LY62_9CRYP) HSP 1 Score: 123 bits (308), Expect = 3.470e-31 Identity = 67/172 (38.95%), Postives = 96/172 (55.81%), Query Frame = 1 Query: 103 IVYQIHLLATNYPHLAQVYSAQYRYGLRSPGPCSEDGSMK-CEQWVLHISDHNTLEAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALREAPESVPWLARLALTRSTVIMPMANSMGYYNTDRWENGMDPNRDFPYGQMPQNCMTTITARQV 615
IV ++ L +P L ++Y+ Q R+GL +PG C DG + C+ WV+ +++ A+ PEVF+SG +HGDE+VGPTAV E L++ + DA W RL TR ++P ANS+GY +R ENG+DPNRDF + Q +CM TI AR +
Sbjct: 1 IVERLRSLQDRFPDLVEIYNTQDRFGLDAPGTCYVDGGLNPCKVWVIVVTNKALRTADT--PEVFYSGTIHGDERVGPTAVTEFVTLLL-----------ERYGTDA---------WARRLVDTRVLTVVPAANSLGYSRNERTENGLDPNRDFAWDQDAGSCMQTIAARSI 150 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1026.228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1026.228.1 >prot_E-siliculosus-1a_F_contig1026.228.1 ID=prot_E-siliculosus-1a_F_contig1026.228.1|Name=mRNA_E-siliculosus-1a_F_contig1026.228.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp MRLCLSWAPVLCLAGLSGGDDLPDNQFETLSYDTIVYQIHLLATNYPHLAback to top mRNA from alignment at E-siliculosus-1a_F_contig1026:25162..31269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1026.228.1 ID=mRNA_E-siliculosus-1a_F_contig1026.228.1|Name=mRNA_E-siliculosus-1a_F_contig1026.228.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6108bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1026:25162..31269+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1026:25162..31269+ >mRNA_E-siliculosus-1a_F_contig1026.228.1 ID=mRNA_E-siliculosus-1a_F_contig1026.228.1|Name=mRNA_E-siliculosus-1a_F_contig1026.228.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1026:25162..31269+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |