mRNA_E-siliculosus-1a_F_contig10224.207.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: D8LQB3_ECTSI (Inositol-3-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQB3_ECTSI) HSP 1 Score: 467 bits (1202), Expect = 6.040e-162 Identity = 233/234 (99.57%), Postives = 233/234 (99.57%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEID L Sbjct: 282 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDGL 515
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A7S1ZAK2_TRICV (Inositol-3-phosphate synthase n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZAK2_TRICV) HSP 1 Score: 389 bits (999), Expect = 2.840e-135 Identity = 190/235 (80.85%), Postives = 209/235 (88.94%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702 QN FVPGVIELA +HKV++ GDDFKSGQTKMKSV++DFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN+ML++E EHPDHVVVIKYVPYV DSKRA+DEYT+EIFMGGKNTI MHNTCEDSLLA+PLI+DLVI+ ELCERI VKK+G KWE FH VLSLLSYMLKAPLVP G PVVNALF QR A+INVMRAC GL P+NHM LEHR +S + L Sbjct: 5 QNPFVPGVIELARQHKVFVAGDDFKSGQTKMKSVLIDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRMLFEEDEHPDHVVVIKYVPYVADSKRAMDEYTNEIFMGGKNTIVMHNTCEDSLLATPLIYDLVILGELCERITVKKDGEDKWEAFHPVLSLLSYMLKAPLVPSGAPVVNALFTQRCAVINVMRACLGLGPDNHMTLEHRFESTLSEL 239
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A2P4Y6M5_9STRA (Inositol-3-phosphate synthase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y6M5_9STRA) HSP 1 Score: 390 bits (1002), Expect = 3.590e-133 Identity = 193/234 (82.48%), Postives = 216/234 (92.31%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGG-KWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDA 699 QNTFVPGV++LAEE KV++GGDDFKSGQTKMKSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVVVIKYVP+VGDSKRALDEYTS+IFM G NTISMHNTCEDSLLASPLI DLV++ E+ ERI +KKEG ++E HSVLS+LSYMLKAPLVP GTPVVNALFAQR+ +IN+ RAC GLAPE+HMLLE+RL SEI+A Sbjct: 188 QNTFVPGVLDLAEEKKVFVGGDDFKSGQTKMKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVIKYVPFVGDSKRALDEYTSKIFMNGNNTISMHNTCEDSLLASPLILDLVLICEIAERITLKKEGAAEFEHMHSVLSILSYMLKAPLVPRGTPVVNALFAQRECMINIFRACVGLAPESHMLLENRLASEINA 421
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A662X127_9STRA (Inositol-3-phosphate synthase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X127_9STRA) HSP 1 Score: 385 bits (990), Expect = 5.120e-133 Identity = 190/234 (81.20%), Postives = 214/234 (91.45%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGK-WEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDA 699 QNTFVPGV++LAEE KV++GGDDFKSGQTK+KSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKEGEHPDHVVVIKYVP+VGDSKRALDEYTS+IFM G NTISMHNTCEDSLLA+PLI DL+I+ EL ER+ +KKEG +E HS+LS+LSYMLKAPLVP GTPVVNALFAQR+ +INV RAC GL ENHMLLE++L SEI+A Sbjct: 75 QNTFVPGVLDLAEEKKVFVGGDDFKSGQTKIKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKEGEHPDHVVVIKYVPFVGDSKRALDEYTSKIFMNGNNTISMHNTCEDSLLATPLILDLLIVCELAERVTIKKEGAAGFEHLHSILSILSYMLKAPLVPRGTPVVNALFAQRECMINVFRACVGLPAENHMLLENKLASEINA 308
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A7S0CGN9_9STRA (Inositol-3-phosphate synthase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGN9_9STRA) HSP 1 Score: 382 bits (982), Expect = 2.080e-132 Identity = 182/232 (78.45%), Postives = 210/232 (90.52%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGG-KWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEI 693 QNTFVPG++ELA ++KV+I GDDFKSGQTK+KSV+ DFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN++LY+EGEHPDH +VIKYVPYVGDSKRA+DEYTSEIFMGG NTI+MHNTCEDSLLA+PLI+DLV+++ELCERI KKEG +WE FH VLSLLSY++KAPLVP G PV+NALF QR AI+N+MRAC GLAP+NHM LEHR +S + Sbjct: 16 QNTFVPGIVELARQNKVFIAGDDFKSGQTKIKSVLTDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRILYEEGEHPDHTIVIKYVPYVGDSKRAMDEYTSEIFMGGINTIAMHNTCEDSLLATPLIYDLVLLSELCERINAKKEGEVEWESFHPVLSLLSYLIKAPLVPDGAPVINALFTQRCAIVNLMRACVGLAPDNHMSLEHRFESTL 247
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: H3G8E9_PHYRM (Inositol-3-phosphate synthase n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8E9_PHYRM) HSP 1 Score: 391 bits (1005), Expect = 2.610e-132 Identity = 192/234 (82.05%), Postives = 216/234 (92.31%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGK-WEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDA 699 QNTFVPGV++LAEE K+++GGDDFKSGQTKMKSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVVVIKYVP+VGDSKRALDEYTS+IFM G+NTISMHNTCEDSLLASPLI DLV++ EL ERI +KKEG K +E HS+LS+LSYMLKAPLVP GTPVVNALFAQR+ +IN+ RAC GL PE+HMLLE++L SEIDA Sbjct: 282 QNTFVPGVLDLAEEKKIFVGGDDFKSGQTKMKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVIKYVPFVGDSKRALDEYTSKIFMNGQNTISMHNTCEDSLLASPLILDLVLVCELAERITLKKEGAKDFEHLHSILSILSYMLKAPLVPRGTPVVNALFAQRECMINIFRACVGLTPESHMLLENKLASEIDA 515
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: B7FWI9_PHATC (Inositol-3-phosphate synthase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWI9_PHATC) HSP 1 Score: 392 bits (1006), Expect = 2.760e-132 Identity = 192/235 (81.70%), Postives = 210/235 (89.36%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEGGK-WEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702 QNTFVPGV+ELA +HKV+I GDDFKSGQTKMKSV+VDFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN++L++E EHPDHVVVIKYVPYV DSKRA+DEYTSEIFMGGKNTI MHNTCEDSLLA+PLI+DLVI+ ELCERI VKKEG + WE FH VLSLLSYMLKAPLVP G PVVNALF QR+A+INVMRAC GL P NHM LEHR +S + L Sbjct: 282 QNTFVPGVLELARQHKVFIAGDDFKSGQTKMKSVLVDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRILFEEDEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLATPLIYDLVILGELCERITVKKEGSEDWEAFHPVLSLLSYMLKAPLVPNGAPVVNALFTQREAVINVMRACLGLGPNNHMTLEHRFESSLKEL 516
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A7S1ZAL6_TRICV (Inositol-3-phosphate synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAL6_TRICV) HSP 1 Score: 391 bits (1005), Expect = 3.800e-132 Identity = 191/235 (81.28%), Postives = 210/235 (89.36%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702 QNTFVPGVIELA +HKV++ GDDFKSGQTKMKSV++DFLVSAGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV SN+ML++E EHPDHVVVIKYVPYV DSKRA+DEYT+EIFMGGKNTI MHNTCEDSLLA+PLI+DLVI+ ELCERI VKK+G KWE FH VLSLLSYMLKAPLVP G PVVNALF QR A+INVMRAC GL P+NHM LEHR +S + L Sbjct: 282 QNTFVPGVIELARQHKVFVAGDDFKSGQTKMKSVLIDFLVSAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVASNRMLFEEDEHPDHVVVIKYVPYVADSKRAMDEYTNEIFMGGKNTIVMHNTCEDSLLATPLIYDLVILGELCERITVKKDGEDKWEAFHPVLSLLSYMLKAPLVPSGAPVVNALFTQRCAVINVMRACLGLGPDNHMTLEHRFESTLSEL 516
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: M4BD01_HYAAE (Inositol-3-phosphate synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BD01_HYAAE) HSP 1 Score: 389 bits (1000), Expect = 1.490e-131 Identity = 194/233 (83.26%), Postives = 214/233 (91.85%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEID 696 QNTFVPGV++LAEE KV++GGDDFKSGQTK+KSV+VDFLVSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVVVIKYVPYVGDSKRALDEYTS+IFM G NTISMHNTCEDSLLASPLI DLV++ EL ERI +KKEG +E HSVLSLLSYMLKAPLVP GTPVVNALFAQR+ +IN+ RAC GLAPENHM+LE++L SEID Sbjct: 282 QNTFVPGVLDLAEEKKVFVGGDDFKSGQTKIKSVLVDFLVSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVIKYVPYVGDSKRALDEYTSKIFMNGTNTISMHNTCEDSLLASPLILDLVLICELAERITLKKEGVSDFEHLHSVLSLLSYMLKAPLVPRGTPVVNALFAQRECMINLFRACVGLAPENHMMLENKLFSEID 514
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Match: A0A1E7FE24_9STRA (Inositol-3-phosphate synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE24_9STRA) HSP 1 Score: 389 bits (999), Expect = 3.370e-131 Identity = 192/235 (81.70%), Postives = 211/235 (89.79%), Query Frame = 1 Query: 1 QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVIKYVPYVGDSKRALDEYTSEIFMGGKNTISMHNTCEDSLLASPLIFDLVIMAELCERIQVKKEG-GKWEGFHSVLSLLSYMLKAPLVPPGTPVVNALFAQRQAIINVMRACAGLAPENHMLLEHRLKSEIDAL 702 QNTFVPGV++LA KV+I GDDFKSGQTKMKSV+VDFLV AGIKP SIVSYNHLGNNDG+NLSAP QFRSKEISKSNVVDDMV+SN++L++E EHPDHVVVIK+VPYVGDSKRALDEYTSEIFMGG NTISMHNTCEDSLLA+PLI+DLVI+AELC+RI VKKEG +WE FH VLSLLSYMLKAPLVP G PVVNALF QRQAIINV+RAC GL PENHM LEHR +S + L Sbjct: 283 QNTFVPGVVDLARHKKVFIAGDDFKSGQTKMKSVLVDFLVGAGIKPVSIVSYNHLGNNDGKNLSAPSQFRSKEISKSNVVDDMVESNRILFEEDEHPDHVVVIKHVPYVGDSKRALDEYTSEIFMGGVNTISMHNTCEDSLLATPLIYDLVILAELCDRISVKKEGESEWEQFHPVLSLLSYMLKAPLVPNGAPVVNALFTQRQAIINVLRACLGLGPENHMSLEHRFESNLAQL 517 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10224.207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10224.207.1 >prot_E-siliculosus-1a_F_contig10224.207.1 ID=prot_E-siliculosus-1a_F_contig10224.207.1|Name=mRNA_E-siliculosus-1a_F_contig10224.207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=234bp QNTFVPGVIELAEEHKVYIGGDDFKSGQTKMKSVMVDFLVSAGIKPTSIVback to top mRNA from alignment at E-siliculosus-1a_F_contig10224:553..2528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10224.207.1 ID=mRNA_E-siliculosus-1a_F_contig10224.207.1|Name=mRNA_E-siliculosus-1a_F_contig10224.207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1976bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10224:553..2528- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10224:553..2528- >mRNA_E-siliculosus-1a_F_contig10224.207.1 ID=mRNA_E-siliculosus-1a_F_contig10224.207.1|Name=mRNA_E-siliculosus-1a_F_contig10224.207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10224:553..2528- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |