mRNA_E-siliculosus-1a_F_contig102.189.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A6H5JWD8_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD8_9PHAE) HSP 1 Score: 487 bits (1253), Expect = 1.030e-168 Identity = 249/266 (93.61%), Postives = 255/266 (95.86%), Query Frame = 2 Query: 143 MALRNSIASRMRGAATALCRSAITAERQVAPMRLLRSTTARGEGVQPADTSAEDVTKKFGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPS-HSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLDFPAGRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGSSSGRGPWSRSIFKELGESEESAAYYMYVLVK 937
MALRNSIASRMRGAATALCRSA AERQVAP+RLLRSTTARGEG QPADTSAED+TKKFGDPSFWER+YTGPQG KAFEWFLSYD GLKEY+LPVLESLV+MPS HSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLM+KRH ALGNYDCREGDVLNLDFPA RFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPE RLELLTECGSSS RGPWSRSIFKELGESE SAAYYMYVLVK
Sbjct: 1 MALRNSIASRMRGAATALCRSATAAERQVAPIRLLRSTTARGEGAQPADTSAEDMTKKFGDPSFWERKYTGPQGHKAFEWFLSYDRGLKEYLLPVLESLVMMPSSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMQKRHAALGNYDCREGDVLNLDFPADRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEMRLELLTECGSSSCRGPWSRSIFKELGESEGSAAYYMYVLVK 266
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: D7FZ50_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ50_ECTSI) HSP 1 Score: 298 bits (763), Expect = 3.660e-96 Identity = 148/155 (95.48%), Postives = 151/155 (97.42%), Query Frame = 2 Query: 473 RLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLDFPAGRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGSSSGRGPWSRSIFKELGESEESAAYYMYVLVK 937
RLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLM+KRH LGNY+CREGDVLNLDFPAGRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGSSSGRGPWSRSIFKELGES+ S AYYMYVLVK
Sbjct: 12 RLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMRKRHATLGNYECREGDVLNLDFPAGRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGSSSGRGPWSRSIFKELGESKGSTAYYMYVLVK 166
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A833R8U1_9POAL (Methyltransferase-like protein 13 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R8U1_9POAL) HSP 1 Score: 102 bits (253), Expect = 2.070e-21 Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 2 Query: 317 FGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLD-FPAGRFDAVVDKGTLDALLCR--SAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGSSSGRGPWSRSIFKELGESEESAA 913
+G+ +W+ Y + Q F+W+ Y E + P+L L+ R SHR+L VGCG S G K+ + V +ID S +R M+ ++ L + + DV ++ F FDAV+DKGTLD+++C S +A M+ EVHRVL++ G+Y+ I+ DP RL LL + W+ +I G+ S A
Sbjct: 7 YGEEWYWDDRYR--KEQTTFDWYQRY-----EAVAPLLRLLL------RPSHRILLVGCGNSPFGEKMVND---DYEQVVNIDISSVVIRAMQSKYSHLPHLQYMKMDVRDMSAFEDNSFDAVIDKGTLDSIMCGNDSQVNATKMLKEVHRVLKERGIYIMITYGDPSYRLGLLMDLNL------WNINIHMRRGDGASSVA 186
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A2P6QZF7_ROSCH (Putative endothelin-converting enzyme 1 n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QZF7_ROSCH) HSP 1 Score: 103 bits (256), Expect = 7.250e-21 Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 2 Query: 317 FGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLD-FPAGRFDAVVDKGTLDALLC--RSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGS 844
+G+P +W+ Y G AF+W+ Y + P++ V P H+ HR+L VGCG S +A++ V ID S ++ M+++H + E DV +++ F FDAV+DKGTLD+LLC S ++A M+SEV RVL+ GVY+ ++ P RL LL E S
Sbjct: 49 YGEPWYWDNRYANESG--AFDWYQKYQS-----LAPIINLYV--PRHNHLRHRILVVGCGNSAFSEGMADD---GYEEVLSIDISSVVIQAMQEKHSNRQDLKYLEMDVRDMNAFQTASFDAVIDKGTLDSLLCGSNSQQNAARMLSEVWRVLKDKGVYILVTYGAPLYRLRLLKESSS 215
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A8B9AQ00_PHODC (EEF1A lysine methyltransferase 4 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AQ00_PHODC) HSP 1 Score: 100 bits (249), Expect = 2.690e-20 Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 2 Query: 317 FGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLD-FPAGRFDAVVDKGTLDALLC--RSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTE 835
+GDP++W++ Y G F+W+ Y + + P+L+ + R SHRLL VGCG SE+G + + V +ID S V M+K++ + DV +++ F G FDA++DKGTLD+L+C + +A M+ EV RVL+ GVY+ I+ DP RL LL +
Sbjct: 14 YGDPAYWDQRYRQDPG--PFDWYQKY-----KTLAPLLDLYL------RRSHRLLLVGCGNSELGEHMIAD---GYQDVVNIDISSVVVEAMQKKYQDKPQLKYIKMDVRDMNSFEDGSFDAIIDKGTLDSLMCGQNAQHNATKMLEEVGRVLKDKGVYILITYGDPSYRLHLLRD 173
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A0G4ED17_VITBC (Methyltransf_11 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ED17_VITBC) HSP 1 Score: 103 bits (256), Expect = 3.120e-20 Identity = 67/197 (34.01%), Postives = 103/197 (52.28%), Query Frame = 2 Query: 272 GVQPADTSAEDVTKKFGDPSFWEREY---TGPQGQKA--FEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLDFPAGRFDAVVDKGTLDALLCRSAEDAL------AMVSEVHRVLRKGGVYVQISAEDPEARLELL 829
G+ P ++ V + G+ ++W+R Y + G+++ EW S++ L+ L++ S + R+LHVGCG S++G LA E VT++D SP A+ + K+RHP L + GD L P+ FD V+DKGTLDA++CR V E+HR+L+ GG YV +S P RL +L
Sbjct: 52 GLDPLLNASLAVEEALGEGNYWDRRYQSLSSASGEESGNHEWLRSWED---------LQGLLVRYMSSED--RILHVGCGQSDMGVCLAGE---GFRRVTNMDISPAAIEMQKERHPTL---EWVVGDGLRTGLPSDHFDVVIDKGTLDAIMCRGEGSVTWGWQGSQYVEEMHRILKPGGRYVAVSHGRPSRRLPVL 231
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A2I0V7F9_9ASPA (Methyltransf_11 domain-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0V7F9_9ASPA) HSP 1 Score: 100 bits (250), Expect = 3.870e-20 Identity = 62/180 (34.44%), Postives = 96/180 (53.33%), Query Frame = 2 Query: 305 VTKKFGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLD-FPAGRFDAVVDKGTLDALLC--RSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTE 835
T +G+PS+W++ Y+ G F+W+ Y + + P+ + + R SH LL VGCG S +G +L + L V +ID S V M+K+H + DV ++ F + FDAV+DKGTLD+L+C + + M+ EV R+L+ GVY+ I+ +P RL LL E
Sbjct: 36 ATHAYGEPSYWDQRYSEDPG--PFDWYQKY-----KTLAPLFDVYI------RRSHHLLVVGCGNSTLGEELVSD---GYLDVVNIDISSVVVEAMQKKHEDKPELKYIKMDVRDMSAFESSSFDAVIDKGTLDSLMCGQNAHHNTSKMLEEVGRILKDNGVYILITYGEPSYRLHLLKE 199
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A1Y1HM77_KLENI (S-adenosyl-L-methionine dependent methyltransferases n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HM77_KLENI) HSP 1 Score: 99.8 bits (247), Expect = 5.910e-20 Identity = 68/194 (35.05%), Postives = 102/194 (52.58%), Query Frame = 2 Query: 317 FGDPSFWEREYTGPQGQKAFEWFLSYDGG---LKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGN--YDCREGDVLNLDFPAGRFDAVVDKGTLDALLC--RSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGSSSGRGPWSRSI 877
+GD ++WE Y FEW+ YDG LK+YI + L++ GCG S + +A++ +T++D SPT ++ MK +H L + C + + + F +G DAV+DKGTLDAL+C + E+ +MVSEV R+LR GGVY+ +S +P R+ L G S R WS S+
Sbjct: 24 YGDAAYWEHRYQ--HDVVPFEWYQKYDGLRDLLKKYIHATADILML--------------GCGNSALSEDMAKD---GYYDITNVDISPTVIKAMKMKHLDLPQLKWVCADARSMTI-FKSGSLDAVIDKGTLDALMCGDEATENVNSMVSEVFRLLRPGGVYLMVSYGEPTTRMPYL---GPS--RRAWSTSL 192
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A2R6PVN7_ACTCC (Methyltransferase-like protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PVN7_ACTCC) HSP 1 Score: 99.8 bits (247), Expect = 6.160e-20 Identity = 79/238 (33.19%), Postives = 115/238 (48.32%), Query Frame = 2 Query: 305 VTKKFGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNLD-FPAGRFDAVVDKGTLDALLCRSAE--DALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGS---------------SSGRGPW---SRSIFKELGESEESA------AYYMYVLVK 937
T+ +GDPS+W+ Y G F+W+ Y + P+L + +P+H HR+L VGCG S + ++ + V +ID S A+ M+K+ L + DV ++ F G F+AVVDKGTLD+LLC S +A M+ EV RVL+ GVY+ I+ P RL LL + S SSG W S + G S E+A +Y+YV +K
Sbjct: 6 TTQAYGDPSYWDNRYAQEPG--TFDWYQKYPA-----LAPLLH--LYIPTH----HRILVVGCGNSAFSEGMVDD---GYVDVVNIDISSVAIEAMRKKCSNLPQLKYIKMDVRDMSAFQTGSFEAVVDKGTLDSLLCGSNSRLNATKMLEEVGRVLKDKGVYILITYGAPIYRLRLLRDALSCTIKLHVIEKLLSEESSGHKKWDLTSAIPLDDNGNSVEAALGKNPDVHYIYVCIK 227
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Match: A0A5J9T116_9POAL (Methyltransf_11 domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T116_9POAL) HSP 1 Score: 99.4 bits (246), Expect = 6.800e-20 Identity = 76/238 (31.93%), Postives = 114/238 (47.90%), Query Frame = 2 Query: 305 VTKKFGDPSFWEREYTGPQGQKAFEWFLSYDGGLKEYILPVLESLVIMPSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMKKRHPALGNYDCREGDVLNL-DFPAGRFDAVVDKGTLDALLC--RSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECG-------------SSSGRGPW-----------SRSIFKELGESEESAAYYMYVLVK 937
++ +G+ +W+ Y G F+W+ Y + P+L V +H R LL VGCG S G + ++ L V +ID S + MKK++ + DV N+ DF +G FDAV+DKGTLD+L+C S E+A M+ EV+R+L + GVY+ I+ DP RL +L + SS + W S SI + LG + +Y+YV VK
Sbjct: 8 TSQAYGEAWYWDERYRKEAG--PFDWYQKYPA-----LAPLLRLYVA--THQR----LLLVGCGNSVFGENMVDD---GYLDVVNIDISSVVIDQMKKKYQDKPQLKYMKMDVKNMSDFQSGSFDAVIDKGTLDSLMCGQNSQENATKMLEEVNRILTENGVYILITYGDPSYRLHILKDMQYWTVKLHVIDRWEKSSNQNKWELTKPLPLNDDSTSIIELLGPKPD--VHYIYVCVK 227 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig102.189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig102.189.1 >prot_E-siliculosus-1a_F_contig102.189.1 ID=prot_E-siliculosus-1a_F_contig102.189.1|Name=mRNA_E-siliculosus-1a_F_contig102.189.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=297bp MRGLDAPTRNTDPRTKESRGPEPANHTRSYPMALRNSIASRMRGAATALCback to top mRNA from alignment at E-siliculosus-1a_F_contig102:38019..41688- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig102.189.1 ID=mRNA_E-siliculosus-1a_F_contig102.189.1|Name=mRNA_E-siliculosus-1a_F_contig102.189.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3670bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:38019..41688- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig102:38019..41688- >mRNA_E-siliculosus-1a_F_contig102.189.1 ID=mRNA_E-siliculosus-1a_F_contig102.189.1|Name=mRNA_E-siliculosus-1a_F_contig102.189.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1782bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:38019..41688- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |