mRNA_E-siliculosus-1a_F_contig10186.175.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: D8LB56_ECTSI (Glyoxalase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB56_ECTSI) HSP 1 Score: 287 bits (734), Expect = 6.490e-94 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 1 Query: 1 QVKLDLLQASGAEKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 QVKLDLLQA GAEKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAE VAAASGDGLVLLDFGAG Sbjct: 197 QVKLDLLQAPGAEKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEAVAAASGDGLVLLDFGAG 348
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S3UZB1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZB1_HETAK) HSP 1 Score: 152 bits (385), Expect = 1.070e-41 Identity = 91/154 (59.09%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 1 QVKLDLLQASGAEKTPIDHGLASGRIAFACDL--VPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 QV L+L++ GA +DH SGRIAFAC VP IH + A T++TPPLTLPT GKADVVVTIL DPDGYEICFVE AFY LA P YDVIDF+ RA+RGGDGA PPK+EKLQHAA + ++ AA D LV++DFGAG Sbjct: 19 QVMLELVEKDGAA---VDHAERSGRIAFACPTGSVPGIH-QMVKDAGHTIMTPPLTLPTEGKADVVVTILADPDGYEICFVEDEAFYDLATPTYDVIDFKERASRGGDGAPPPKAEKLQHAAELKXXXXXXXXX-XILRAAGPDRLVVVDFGAG 167
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S3UXG7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXG7_HETAK) HSP 1 Score: 155 bits (392), Expect = 1.250e-41 Identity = 92/154 (59.74%), Postives = 107/154 (69.48%), Query Frame = 1 Query: 1 QVKLDLLQASGAEKTPIDHGLASGRIAFACDL--VPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 QV+L L+Q +DH +SGRIAFAC VP IH +A A T++TPPLTLPTPGKADVVVTIL DPDGYEICFVE AFY LA P YDVIDF+ RA+RGGDGA PPK+EKLQHAA + ++ AA D LV++DFGAG Sbjct: 189 QVRLLLVQTEPG--VAVDHAKSSGRIAFACPTGSVPGIHQKAKDAGE-TIMTPPLTLPTPGKADVVVTILADPDGYEICFVEDEAFYDLATPTYDVIDFKERASRGGDGAPPPKAEKLQHAAELKXXXXXXXXX-XILRAAGPDRLVVVDFGAG 338
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A0M0J531_9EUKA (Glyoxalase domain-containing protein 4-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J531_9EUKA) HSP 1 Score: 150 bits (378), Expect = 1.100e-40 Identity = 80/140 (57.14%), Postives = 103/140 (73.57%), Query Frame = 1 Query: 37 EKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 + P+DH LASGRIA +C V P + A A+ G+++ P+TLPTPGKADVVVTIL DPDGYEICFV + FY LA+P YD +++E RATRGGDGAAPPK ++ A G+ A VT +V+ + AA+S G+V+LDFGAG Sbjct: 206 DSAPMDHALASGRIANSCRAVYPFYEAAEASGKGSIMNKPITLPTPGKADVVVTILADPDGYEICFVGDIGFYDLAKPLYDKVNWELRATRGGDGAAPPKPDQKHQAKGLRA-VTESSQVSSL-AASSATGVVVLDFGAG 343
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S2V686_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V686_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.790e-35 Identity = 76/112 (67.86%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 1 QVKLDLLQ-ASGAEKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPP 333 QVKL L++ A GAE + H L+SGRIAFA VPPI EA A TV TPPLTLPTPGKADVVVTIL D DGYEICFVE AFY LA PKYD+ID++ RA+RG DGA PP Sbjct: 246 QVKLQLIEVADGAE---VSHALSSGRIAFATKSVPPIF-EAVTEAKETVQTPPLTLPTPGKADVVVTILVDRDGYEICFVEDEAFYDLATPKYDIIDYQERASRGADGAPPP 353
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S3UWP7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP7_HETAK) HSP 1 Score: 125 bits (313), Expect = 6.400e-34 Identity = 73/122 (59.84%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 1 QVKLDLLQASGAEKTPIDHGLASGRIAFACDL--VPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAA 360 QV L+L++ GA +DH SGRIAFAC VP IH + A T++TPPLTLPT GKADVVVTIL DPDGYEICFVE AFY LA P YDVID+ R +RG DGA PP +K AA Sbjct: 19 QVMLELVEKDGAA---VDHAERSGRIAFACPTGSVPGIH-QMVKDAGHTIMTPPLTLPTEGKADVVVTILADPDGYEICFVEDEAFYDLATPLYDVIDWVDRESRGADGAPPPGGKKKAGAA 136
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S2V7Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Q7_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.120e-33 Identity = 69/102 (67.65%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 151 PPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 PPLTLPTPGKADVVVTIL D DGYEICFVE AFY LA P YDVIDF RATRGGDGA PP +KL+H + V T E++ E + AA G LV+LDFGAG Sbjct: 1 PPLTLPTPGKADVVVTILVDRDGYEICFVEDEAFYDLATPTYDVIDFLERATRGGDGAPPPAVKKLEHVEEMPG-VETEEDLEEALKAA-GKKLVVLDFGAG 100
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A835YGN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGN6_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.340e-33 Identity = 73/107 (68.22%), Postives = 83/107 (77.57%), Query Frame = 1 Query: 136 GTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 G V+TPPLTLPTPGKADVVVTIL DPD YEICFVE AFY LA P YDV+D+ RAT GGDGA PPK+ KL+HAA VT VTT E++ ++V A G VLL+FGAG Sbjct: 323 GAVLTPPLTLPTPGKADVVVTILADPDDYEICFVEDAAFYDLATPTYDVVDWGLRATMGGDGAPPPKA-KLEHAASVTP-VTTEEDLDQLVKQAGGKA-VLLEFGAG 426
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S2ELB3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ELB3_TRICV) HSP 1 Score: 125 bits (314), Expect = 2.330e-31 Identity = 74/142 (52.11%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 37 EKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGA-APPKSEKLQHAAGVTAAVTTPEEVAEVVAAASG--DGLVLLDFGA 453 + P+DH LASGRIA AC V P H+ A + G V+ PP+TLPTPGKADVVVTIL DPDGYEICFV FY LA P YD +D++ R RGGDGA AP + E + T VAE + AS G L+FGA Sbjct: 272 DSVPVDHALASGRIANACRSVEPFHNAAVSTGLGGVLNPPVTLPTPGKADVVVTILTDPDGYEICFVGDEGFYDLAVPLYDKVDWDLRTRRGGDGAPAPGRKEATAGTKPGEGGIPTVTGVAETESLASSAPSGAADLEFGA 413
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Match: A0A7S4L734_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L734_9EUKA) HSP 1 Score: 118 bits (295), Expect = 1.370e-30 Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 49 IDHGLASGRIAFACDL-VPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEVVAAASGDGLVLLDFGAG 456 +DH L+SGRIAFA V PI + + TV+TPPLTLPTPGKADVVVTIL D DGYEICFVE V FY+LA P YD ID+E+R +GGDG P S + H + E + + A G+GL ++D+ AG Sbjct: 4 VDHALSSGRIAFATRAGVKPIFDKVTESGD-TVLTPPLTLPTPGKADVVVTILADRDGYEICFVEEVGFYELATPTYDNIDWEARGKKGGDGNPLPTSTPIAHGD----KMVHLEGESGLDTAKGGEGLAVVDWSAG 135 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10186.175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10186.175.1 >prot_E-siliculosus-1a_F_contig10186.175.1 ID=prot_E-siliculosus-1a_F_contig10186.175.1|Name=mRNA_E-siliculosus-1a_F_contig10186.175.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=153bp QVKLDLLQASGAEKTPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITback to top mRNA from alignment at E-siliculosus-1a_F_contig10186:822..2300- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10186.175.1 ID=mRNA_E-siliculosus-1a_F_contig10186.175.1|Name=mRNA_E-siliculosus-1a_F_contig10186.175.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1479bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10186:822..2300- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10186:822..2300- >mRNA_E-siliculosus-1a_F_contig10186.175.1 ID=mRNA_E-siliculosus-1a_F_contig10186.175.1|Name=mRNA_E-siliculosus-1a_F_contig10186.175.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=918bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10186:822..2300- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |