mRNA_E-siliculosus-1a_F_contig1018.173.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: A0A6H5KWN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN4_9PHAE) HSP 1 Score: 1105 bits (2859), Expect = 0.000e+0 Identity = 578/655 (88.24%), Postives = 585/655 (89.31%), Query Frame = 2 Query: 293 MAEWASQFEGEHGATKLVGLAVDSRGDVALAGHVFEDGGGFVDGRRDAIVLKLASGDGSTLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGMFADEKGXXXXXXXXXXXXXXARGGAGAGDGWNKDGWAPPNSQGGDAVVSDMFVAKLDGESGALVWGEQFGSGADDQAVGLVLGPVSSAAADAVGSLEKEKGGGSPLYLTGWTRGALFSKEPARWQDGWAVKLPNPPPSTLGVADAGAWEEPLPVPIGSGAAEAQQAAAERGAVTAGLVGTVTGMLVVVSICLYFVLRKANMAGGALSAPRYDPVKDPDPTKGMFRRRGRPMLHDSGGKGVGGGGKAQDGVELTLLSEGGDGGRSSPLASRSGSXXXXXXXXAIGSKRDTNPPPSGQQATFYL 2257
MAEWASQFEGEHGATKLVGLAVDSRGDVALAGHVFEDGG FVDGRRDAIVLKLASGDGSTLWTRNIGV GSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLF+D GGVFES SS TE+TGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYVV RLNGHDG+ETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPR + + LDGESGALVWGEQFGSGADDQAVGLVLGPVS AA DAVGSLE+EKGGGSPLYLTGWTRGALFSKEPARWQDGWAVKLPNPPPSTLGVAD GAWE+PLPVPIGSGAAEAQQAAAERGAVTAGLVGTVTGMLVVVSICLYFVLRKANM GGALSAPRYD VKD DPTKGMFRRRGRPMLHDSGGKG GGGGKAQDGVELTLLSEGGDGGRSSPLASRSGSXXXXXXXXAIG KRDTNPPPSGQQATFYL
Sbjct: 1 MAEWASQFEGEHGATKLVGLAVDSRGDVALAGHVFEDGGSFVDGRRDAIVLKLASGDGSTLWTRNIGVHGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFEDPGGVFESSSSRETEDTGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYVVVRLNGHDGTETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRDP-----------------------------------------------IDAPSLRNLDGESGALVWGEQFGSGADDQAVGLVLGPVSFAAGDAVGSLEQEKGGGSPLYLTGWTRGALFSKEPARWQDGWAVKLPNPPPSTLGVADTGAWEKPLPVPIGSGAAEAQQAAAERGAVTAGLVGTVTGMLVVVSICLYFVLRKANMTGGALSAPRYDSVKDLDPTKGMFRRRGRPMLHDSGGKGQGGGGKAQDGVELTLLSEGGDGGRSSPLASRSGSXXXXXXXXAIGGKRDTNPPPSGQQATFYL 608
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: D8LTJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ4_ECTSI) HSP 1 Score: 547 bits (1410), Expect = 2.110e-181 Identity = 271/280 (96.79%), Postives = 275/280 (98.21%), Query Frame = 2 Query: 344 VGLAVDSRGDVALAGHVFEDGGGFVDGRRDAIVLKLASGDGSTLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSST 1183
VGLAVDSRGDVALAGHVFEDG GFVDGRRDAIVLKLAS DGSTLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLF++ GGVFESGSSG TEE GNKGTKAFCA+LAASDGHVVWGTRFKGGSN+EILAAAVDPLTGDVFAAGYISEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSST
Sbjct: 22 VGLAVDSRGDVALAGHVFEDGSGFVDGRRDAIVLKLASADGSTLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFENPGGVFESGSSGETEEKGNKGTKAFCARLAASDGHVVWGTRFKGGSNNEILAAAVDPLTGDVFAAGYISEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSST 301
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: D8LTJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ3_ECTSI) HSP 1 Score: 506 bits (1302), Expect = 5.410e-166 Identity = 288/303 (95.05%), Postives = 293/303 (96.70%), Query Frame = 2 Query: 1349 MFADEKGXXXXXXXXXXXXXXARGGAGAGDGWNKDGWAPPNSQGGDAVVSDMFVAKLDGESGALVWGEQFGSGADDQAVGLVLGPVSSAAADAVGSLEKEKGGGSPLYLTGWTRGALFSKEPARWQDGWAVKLPNPPPSTLGVADAGAWEEPLPVPIGSGAAEAQQAAAERGAVTAGLVGTVTGMLVVVSICLYFVLRKANMAGGALSAPRYDPVKDPDPTKGMFRRRGRPMLHDSGGKGVGGGGKAQDGVELTLLSEGGDGGRSSPLASRSGSXXXXXXXXAIGSKRDTNPPPSGQQATFYL 2257
MFADEKGXXXXXXXXXXXXXXARGGAG+GDGWNKD WAPPNSQGGDAVVSDMFVAKLDGESG LVWGEQFGSGADDQAVGLVLGPVSSAAADAVGSLE+E+GGGSPLYLTGWTRGALFSK+PARWQDGWAVKLPNPPPSTLGVADAGAWEEPLPVPIGSGAAEAQQAAAERGAVTAGLVGTVTGMLVVVSICLYFVLRKANMAGGALSA +KDPDPTKGMFRRRGRPMLHD GGKGVGG GKAQDGVELTLLSEGGDGGRSSPLASRSGSXXXXXXXXAIG KRDTNPPPSGQQATFYL
Sbjct: 1 MFADEKGXXXXXXXXXXXXXXARGGAGSGDGWNKDVWAPPNSQGGDAVVSDMFVAKLDGESGGLVWGEQFGSGADDQAVGLVLGPVSSAAADAVGSLEQEQGGGSPLYLTGWTRGALFSKQPARWQDGWAVKLPNPPPSTLGVADAGAWEEPLPVPIGSGAAEAQQAAAERGAVTAGLVGTVTGMLVVVSICLYFVLRKANMAGGALSA-----LKDPDPTKGMFRRRGRPMLHDGGGKGVGGAGKAQDGVELTLLSEGGDGGRSSPLASRSGSXXXXXXXXAIGGKRDTNPPPSGQQATFYL 298
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: UPI0011C3500C (SBBP repeat-containing protein n=3 Tax=Meiothermus hypogaeus TaxID=884155 RepID=UPI0011C3500C) HSP 1 Score: 113 bits (282), Expect = 7.670e-22 Identity = 115/352 (32.67%), Postives = 166/352 (47.16%), Query Frame = 2 Query: 302 WASQFEGEHGATKLVGLAVDSRGDVALAGHVFEDGGGFVD-GRRDAIVLKLASGDGSTLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEA-------GGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACG 1333
W QF G K LAVDS+G+V +AG V G GR DA + K +G+ +WTR G G D ++A+A D GN+ V GQ +G L G+ D ++ K + G +W Q G++G + AS L V +G+V+V G TG L +T + AF K + G+ +W +F S + + A AVD G+V AG ++ A G D + + + +G+ W G T RD A ALAVD +G+V++AG GAL T G TDAF+ K D NG +W Q G++ + +A+AVD G+V G
Sbjct: 126 WTRQF-GTDRLDKASALAVDSQGNVLVAGEVVNALPGQAPLGRTDAFLRKYDP-NGNPIWTRQFGT-GGFDEANALAVDGQGNVLVAGQVEGALPGQIHLGN-SDAFLRKYD-PNGNPIWTRQFGTSGDEAASALAVDG---QGNVLVAGWVTGAL---------------PGQTHLGKSDAFLRKYDPN-GNPIWTRQFGTDSAETVSALAVDGQ-GNVLVAGDVAGALPGQTHLGFFDAFLRKYD-PNGNPIWTRQFG----------TGDRDEANALAVDGQGNVLVAGWVAGALPGQTHLGV-TDAFLRKYD-PNGNPIWTRQFGTDSA-ETVSALAVDGQGNVLVAG 438
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: L8M039_9CYAN (Beta-propeller repeat protein n=1 Tax=Xenococcus sp. PCC 7305 TaxID=102125 RepID=L8M039_9CYAN) HSP 1 Score: 110 bits (276), Expect = 2.750e-21 Identity = 138/478 (28.87%), Postives = 206/478 (43.10%), Query Frame = 2 Query: 347 GLAVDSRGDVALAGHVFEDGGGFVDGRRDAIVLKLASGDGSTLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQ---DIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGG-VFESG-SSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYI--SEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVR-DSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGMFADEKGXXXXXXXXXXXXXXARGGAGAGDGWNKDGWAPPNSQGGDAVVSDMFVAKLDGESGALVWGEQFGSGADDQAVGLVLGPVSSAAADAVGSLEKEKGGGSPLYLTGWTRGALFSKEPARWQDGWAVKLPNP 1756
G+A+DS G+V ++G G G D V K G+ LWT+ G D+ +ATD +G++++ G + G + EG Q D WV K +G+G LLW Q+G +G D A+ G+ DLGG V+ SG ++G ++E G+ A+ K G+++W + S EI A + G+ + +G S + ++ VA+ + +G+ W N D + A+ D G+V IAG T G++ +AG + DA+VAK DG G +W Q G+ VGND A + DS G+VY G F +E G A AG SD +VAK D +G L+W EQFGS DD + G+ + D+ GS LYL+G T G L +D W ++ P
Sbjct: 22 GIAIDSNGNVFISGSTRGTLGNTNFGNSDTWVAKYDH-QGNLLWTQQFGTSNLDDF-EGLATDINGHVYIAGSSLGTI-----EGTFQIDSDAWVNKYDGQGN-LLWSQQLGFSGFDSAT---------------------GVATDLGGNVYISGFTNGISDEANGGGSVAWVTKYDVQ-GNLLWNQQLDA-SGSEISAGVTTDIHGNFYISGDTTRSNSENTNAWVAKYDA-EGNLLW---------NQQLDSAEAEFDYSQAVTTDLSGNVYIAGGTNGSI-DRGNAGLN-DAWVAKYDG-EGNLLWTEQLGT-VGNDAAEGITTDSEGNVYISG------FTNE----------------TLGEANAGG-------------------SDAWVAKYD-SNGNLLWTEQFGSPEDDDSQGVAI--------DSNGS----------LYLSGSTEGNLDGVN-FGGEDAWVAQISQP 393
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: UPI001ABACC85 (SBBP repeat-containing protein n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABACC85) HSP 1 Score: 107 bits (266), Expect = 2.620e-20 Identity = 128/482 (26.56%), Postives = 185/482 (38.38%), Query Frame = 2 Query: 470 TLWTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTG---------------------------------------GLFDDLGGVFESGSSGATEETGNKGTK-----------AFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYI------SEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGMFADEKGXXXXXXXXXXXXXXARGGAGAGDGWNKDGWAPPNSQGGDAVVSDMFVAKLDGESGALVWGEQFGSGADDQAVGLVLGPVSSAAADAVGSLEKEKGGGSPLYLTGWTRGALFSKEPARWQDGWAVKL 1747
T W R G G D S ++ D++GN++V G T G+L D +V K + G LW Q G++G D AS + V + G+V V GST G G LG SS TGN AF AK ++S G +W + S+D A VD TG+V+ AGY + AGG D +A+ N G++ W G T+ D LA+D G++ I GNT G+L + + G +D F+AK + ++GT +W Q G+ +DY+ +AVDS G+ Y G + G D ++ K D +G L+W EQ G+ ADD+A G+ + G+ +YLTG T GAL + + D W K
Sbjct: 87 TDWIRQFGTLGD-DSSGRISIDKAGNVYVVGSTSGSLGG--ANAGNYDAFVTKYDNRGN-RLWIRQWGTSGYDGASDVAVDNA---GNVYVAGSTGGSVVTSRSISGATSINIISNTVAFVTKYDTNGNQLWTKQFGTATTLGIRLALDSSDNVYITGNSNNSLGGVFAGGIEDAFVAKYSSS-GTQLWIRQLGTSSDDNSFAIGVDS-TGNVYIAGYTDGLLGSTRAGGRDAYIAKYN-TSGTQLWIQQLG----------TSADDLIYGLALDSNGNIYITGNTTGSLGGTNAGG--SDVFIAKYN-SSGTRLWTKQLGTNT-DDYSGGIAVDSTGNAYITGFTKGSLGETNLGSY-----------------------------------------DAWIGKYD-SNGQLLWKEQLGTVADDEAFGIAVQ-------------------GNSIYLTGETAGALAAPNAGSY-DAWLAKF 482
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: A0A7C3ZKK4_9CYAN (Uncharacterized protein n=1 Tax=Planktothricoides sp. SpSt-374 TaxID=2282167 RepID=A0A7C3ZKK4_9CYAN) HSP 1 Score: 103 bits (256), Expect = 2.270e-18 Identity = 87/299 (29.10%), Postives = 143/299 (47.83%), Query Frame = 2 Query: 476 WTRNIGVPGSHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPL-----TGDVFAAGYISEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGMFA 1357
W IG P + D++ +A+D +GNI++GG+T+GN + G+D+W+ K + G +W QVG++G+D A ++ EG+ + G+T+G L G ++ A+ AK + G+ +W + SND+ + D L TG + A AG D VA+ + +TG W+ T D+A ++ D G++ + G+T+G+L D DA+VAK D ++G +W Q G+ G D + A DS G+VY G G+FA
Sbjct: 13 WLEQIGTPAA-DYAYGIASDMAGNIYIGGETEGNFGG--SNSGGRDVWLGKYD-RAGNQIWRQQVGTSGEDSAYNISTDK---EGNTYITGTTSGQLGSSSSGKYD----------------AWVAKYDGA-GNQLWLQQLGSISNDDSRSVTTDSLGNVYITGSTWGAVEGINAGEWDIWVAKYD---------ATGNQQWVKQ--LGTPAEDNATSITTDSSGNIYVTGSTKGSLRRHQG---DFDAWVAKYD-SDGNMLWLEQLGT-AGEDKSLGAATDSAGNVYITGWT-NGVFA 270
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: A0A1V4VSC1_9FIRM (Endo-1,4-beta-xylanase A n=1 Tax=Pelotomaculum sp. PtaB.Bin013 TaxID=1811692 RepID=A0A1V4VSC1_9FIRM) HSP 1 Score: 101 bits (252), Expect = 7.810e-18 Identity = 119/423 (28.13%), Postives = 162/423 (38.30%), Query Frame = 2 Query: 503 SHDWSSAVATDRSGNIFVGGQTDGNLFAPWTEGDGQ-----DIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGT-KAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYI-------------SEAGGSDYVVARLNGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGALFSST-----SAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGMFADEKGXXXXXXXXXXXXXXARGGAGAGDGWNKDGWAPPNSQGGDAVVSDMFVAKLDGESGALVWGEQFGSGADDQAVGL---------VLGPVSSAAADAVGSLEKEKGGGSPLY 1672
++D++ A+A D SGN +V G T N F G D++VAKL G GL++ +G D S L V S G+ + G T F + NKG AF AKL S +V+ T G + D A AVD G + AGY S G SD VA+LN S + + GG TD + + A+AVD GD +AG T F + S G DAFV KL+ + V+ G G D A+A+AVDS+G+ Y G F A P QG + D FVAKL+ +V+ G DD+A L + G S+ G ++ GGG +
Sbjct: 269 NNDYAKAIAVDSSGNTYVAGYTMSNNFPTVNPCQGSYRGNGDVFVAKLNPAGTGLVYSTYLGGNSWDQTSALAVDS---SGNTYIAGYTLSTNFPTANPY----------QISNKGGGDAFVAKLNPSGNGLVYSTYLGGSNTDNAYAIAVDSA-GSAYLAGYTQSTDLPTVNPCQPSNGGASDAFVAKLNSTGNSLVYSTYLGG------ITD----EVSFAIAVDSSGDAYVAGYTLSTNFPTAGPYQASTGGSYDAFVTKLNPSGSGPVYSTYIGGN-GYDQASAIAVDSSGNAYIAGWTASTNFPV---------------------------------AGP-CQGSNGGGQDAFVAKLNPSGSGIVYSTYLGGSNDDRAYALTVELSGSVYIAGYTGSSNFPTAGPCQESNGGGQDAF 632
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: A0A7K1SHH1_9BACT (Uncharacterized protein n=1 Tax=Spirosoma arboris TaxID=2682092 RepID=A0A7K1SHH1_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 8.880e-16 Identity = 114/391 (29.16%), Postives = 166/391 (42.46%), Query Frame = 2 Query: 518 SAVATDRSGNIFVGGQTDGNL-FAPW------TEGDGQDIWVAKLEGEGGGLLWGYQVGSAGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGY---------------ISEAGGSDYVVARLNGHDGSE-TWRSTGGGGWMNNGFTDTNVRDSACALAVDWRGDVIIAGNTEGAL--------FSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGMFADEKGXXXXXXXXXXXXXXARGGAGAGDGWNKDGWAPPNSQGGDAVVSDMFVAKLDGESGALVWGEQFGSGADDQAVGLVL 1597
++VA D GN++ G G + F P T G DI+V+K GG L+W Q+G +G D+ +++ V G+V TTG +D + F+ G+ G T F +KL A G++VW R G S+D + AVD +G+V+ GY ++ G D +++L+ GS W GG D ++AVD G+V G G L F+ TSAG++TD FV+KLD A G VW Q G + +D ++AVD G+VY G + + G GAG N DMFV+KLD G VW + GS +D + L +
Sbjct: 75 TSVAVDGVGNVYTTGNFRGTVDFDPGAGVFNLTSAGGDDIFVSKFN-TGGNLIWAKQLGGSGDDVGNSVVVDG---SGNVY----TTGLFYDTVD--FDPGA-GVLNLTSAGYDDMFVSKLDAG-GNLVWVKRIGGISHDGGASIAVDG-SGNVYTTGYFLGTTDFDPGAGVFNLTSLGDYDIFMSKLD--SGSNFVWAKRVGG----------TENDEGTSVAVDGMGNVYTTGFFLGTLDFDPGVGVFNLTSAGKNTDVFVSKLD-AGGNFVWAKQLGGKY-HDGGTSIAVDKLGNVYTTG------YFQDTGDFDP-------------GAGV-----------FNMTSAPGAYEDMFVSKLDA-GGNFVWAKGVGSTGNDYSTSLAV 407
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Match: F2UQX0_SALR5 (SH2 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UQX0_SALR5) HSP 1 Score: 93.2 bits (230), Expect = 2.710e-15 Identity = 104/353 (29.46%), Postives = 145/353 (41.08%), Query Frame = 2 Query: 407 GGFVDGRRDAIVLKLASGDGSTLWTRNIGVPGSHDWSSAVATDR-SGNIFVGGQTDGNLFAPWTEGDGQDIWVAKLEGEGGGLLWGYQVGS-AGQDMASTLTVQSGVLEGDVIVCGSTTGGLFDDLGGVFESGSSGATEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGY--------ISEAGGSDYVVARL--NGHDGSETWRSTGGGGWMNNGFTDTNVRDSACALAVDWRG-----------------DVIIAGNTEGALFSSTSAGRDTDA---------FVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRGM 1351
GG G RDA VL ++ G LW+ +G P + D++++VA D SG++ VGG T G+L+ P G+ +D + +L+ G ++W QVGS G D ++ V G+ V G T D + A A+ G V+W F + AVD TG+VF +G S G D V RL G+D S W + G G + D A ALAVD DV + G + FS S+G D DA FV ++D ++G VW GS G D VAV +NG VY G+
Sbjct: 789 GGSHSGGRDAFVLHISKQSGELLWSAQLGTP-ADDYATSVAVDEASGDVIVGGGTQGSLYGPLI-GE-EDAFAVRLDAGTGAVVWSSQVGSLGGVDNYESVAVHGGI----VYATGQTRPATSD---------------------AEVVVAARNATTGQVLWTRVFGSNRYNSGRGLAVDKGTGNVFVSGRSNGPVADGASAFGRDDGFVVRLVPAGNDSSVAWATHLGTGGI----------DRAMALAVDXXXXXXXXXXXXXXXXXXXXDVFVVGQS----FSDWSSGDDDDALVNQGSSDVFVVRVDASSGAVVWTALVGSS-GTDVGAGVAV-ANGTVYVAALIEGGL 1097 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1018.173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1018.173.1 >prot_E-siliculosus-1a_F_contig1018.173.1 ID=prot_E-siliculosus-1a_F_contig1018.173.1|Name=mRNA_E-siliculosus-1a_F_contig1018.173.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=656bp MAEWASQFEGEHGATKLVGLAVDSRGDVALAGHVFEDGGGFVDGRRDAIVback to top mRNA from alignment at E-siliculosus-1a_F_contig1018:27116..38956+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1018.173.1 ID=mRNA_E-siliculosus-1a_F_contig1018.173.1|Name=mRNA_E-siliculosus-1a_F_contig1018.173.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11841bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1018:27116..38956+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1018:27116..38956+ >mRNA_E-siliculosus-1a_F_contig1018.173.1 ID=mRNA_E-siliculosus-1a_F_contig1018.173.1|Name=mRNA_E-siliculosus-1a_F_contig1018.173.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3936bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1018:27116..38956+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |