mRNA_E-siliculosus-1a_F_contig1014.150.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1014.150.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1014.150.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.560e-106
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1

Query:    1 VGLRLAHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            VGLRL HFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDE+AIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF
Sbjct:    3 VGLRLTHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.920e-66
Identity = 104/142 (73.24%), Postives = 123/142 (86.62%), Query Frame = 1

Query:   55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            MGIIK+GKVV++LAGRYAGRKAIVVK +D GS +RKF HA+VAGIDRYPR+VTK+MSK K+ KR+K KPFVK+VNVNH+MPTRY  DI+LK  V+ESA KAS  +VRKAV+K+FEERYLNQ  +KSEKKA+G KYFF KL F
Sbjct:    1 MGIIKAGKVVIMLAGRYAGRKAIVVKAYDSGSADRKFTHALVAGIDRYPRKVTKSMSKVKVAKRSKCKPFVKFVNVNHLMPTRYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA)

HSP 1 Score: 200 bits (509), Expect = 4.250e-63
Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 1

Query:    1 VGLRLAHFPVCLAWFEAI-MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKA--SPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            +GL  A  P    +  A  MGIIK+GKVVVLL GR+AGRKAIVVK FDEG  +RK+G AIVAGIDRYPR+VT++M K+KIKK++K+KPFVKYVN NH+MPTRY VDIDLKK +D+  +    S  + RK ++K+FEERYLNQ D  SEKKATGV +FF+KLRF
Sbjct:   12 IGLEAADIPCSRHFLHAENMGIIKNGKVVVLLNGRFAGRKAIVVKAFDEGVGDRKYGFAIVAGIDRYPRKVTRSMGKNKIKKKSKIKPFVKYVNYNHMMPTRYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: M4B173_HYAAE (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=M4B173_HYAAE)

HSP 1 Score: 197 bits (502), Expect = 1.860e-62
Identity = 100/144 (69.44%), Postives = 120/144 (83.33%), Query Frame = 1

Query:   55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDV--RKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            MGI+K+GKVVVLL GR+AGRKAIVVK FDEG  +RKFGHAIVAGIDRYPR+VT++MSK K+K+R+K+KPFVKYVN NHIMPTRY  DIDLKK +D+  +    T +  RK ++K+FEERYLNQ   KSEKKA GV +FF+KLRF
Sbjct:    1 MGIVKNGKVVVLLNGRFAGRKAIVVKTFDEGRGDRKFGHAIVAGIDRYPRKVTRSMSKAKVKQRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLGNPETRIESRKTIKKVFEERYLNQGSCKSEKKAAGVSFFFKKLRF 144

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN)

HSP 1 Score: 193 bits (490), Expect = 1.250e-60
Identity = 96/145 (66.21%), Postives = 123/145 (84.83%), Query Frame = 1

Query:   55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            MGI+K+GKVV++L GR+AGRKA+VVK  DEG  +RKFGHAIVAGIDRYPR+VT+AMSK K+KK++K+KPF+K VN++H+MPTRY VDIDLKK +D+  + A+P    + RK ++K+FEERYLNQ  VKSEKKA GV +FF+KLRF
Sbjct:    1 MGIVKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A0W8DKH9_PHYNI (Platelet-activating factor acetylhydrolase IB subunit alpha n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DKH9_PHYNI)

HSP 1 Score: 194 bits (492), Expect = 1.530e-60
Identity = 99/148 (66.89%), Postives = 122/148 (82.43%), Query Frame = 1

Query:   46 EAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            + ++  +K+GKVVVLL GR+AGRKAIVVK FDEG  +RKFGHAIVAGIDRYPR+VT+AM K+K+KKR+K+KPFVKYVN NHIMPTRY  DIDLKK +D+  + A+P    + RK ++K+FEERYLNQ   KSEKKA GV +FF+KLRF
Sbjct:   26 DLLLCSVKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQAACKSEKKAAGVSFFFKKLRF 172

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A7S4SWS4_9DINO (60S ribosomal protein L27 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SWS4_9DINO)

HSP 1 Score: 192 bits (488), Expect = 2.430e-60
Identity = 94/136 (69.12%), Postives = 117/136 (86.03%), Query Frame = 1

Query:   55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYF 462
            MGIIKSGKVVV+LAGRYAGRKA+VVK +D+GS +RKF HA+V GIDRYP++VTK M+K KI KR+K+KPF+K +N+NH+MPTRY VD+DLKK VDE+A K +  + RK V+KIFE+RYLNQ   KSEKKA+GV+YF
Sbjct:    8 MGIIKSGKVVVVLAGRYAGRKAVVVKTYDDGSIDRKFSHAMVVGIDRYPKKVTKGMTKTKITKRSKMKPFLKCINLNHLMPTRYSVDMDLKKTVDEAAFKEAKKETRKTVKKIFEDRYLNQASGKSEKKASGVQYF 143

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A6U1L5V7_9STRA (60S ribosomal protein L27 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1L5V7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.930e-59
Identity = 90/142 (63.38%), Postives = 116/142 (81.69%), Query Frame = 1

Query:   55 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            MG+IKSGKVV++L GR+AGRKAIVVK +D+G+  R+F HA+VAGIDR PR+VT++MSK+KI+KRTK+KPF+KYVN  H+MPTRY VD+DLKK VDES +K    + RKA++K+FEERY  Q   K EKKA G  YF++K+ F
Sbjct:    1 MGVIKSGKVVIVLQGRFAGRKAIVVKAYDDGNAERRFAHAMVAGIDRAPRKVTRSMSKEKIQKRTKMKPFLKYVNYTHLMPTRYVVDLDLKKIVDESGLKEGKAEARKAIKKVFEERYHQQSSAKXEKKAAGTMYFYKKMAF 142

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A812X5C3_SYMMI (60S ribosomal protein L27 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5C3_SYMMI)

HSP 1 Score: 187 bits (475), Expect = 2.030e-58
Identity = 97/140 (69.29%), Postives = 114/140 (81.43%), Query Frame = 1

Query:   64 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASP-TDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            IKSGKVV+LLAGRYAGRKA+VVK  D+GS+ ++FGHAIVAGIDRYPR+V KAM K KI+KRTK+KPFVK VN NHIMPTRY  D DLKK VDE A+ +    D RK ++K+FEE+Y NQ   KSEKKA G +YFF+KLRF
Sbjct:    1 IKSGKVVILLAGRYAGRKAVVVKTNDDGSDGKRFGHAIVAGIDRYPRKVVKAMGKAKIEKRTKIKPFVKVVNFNHIMPTRYAADFDLKKVVDEKALSSEARVDTRKNLKKVFEEKYRNQSS-KSEKKAGGTQYFFKKLRF 139

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BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Match: A0A397BII5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397BII5_9STRA)

HSP 1 Score: 186 bits (473), Expect = 7.080e-58
Identity = 94/142 (66.20%), Postives = 117/142 (82.39%), Query Frame = 1

Query:   64 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPT---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 480
            +K+GKVVVLL GRYAGRKAIVVK +DEG  +RKFGHAIVAGIDRYPR++T++M K K+ KR+K+KPFVKYVN NHI+PTRY  DI+LKK VD+  + A+P    + RK ++K+FE+RYLNQ   KSEKKA GV +FF+KLRF
Sbjct:   16 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVTKRSKIKPFVKYVNYNHILPTRYVADIELKKVVDDEVL-ATPEARIESRKIIKKVFEDRYLNQGATKSEKKAAGVSFFFKKLRF 156

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1014.150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D7FLL5_ECTSI	1.560e-106	98.75	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CBN1_9STRA	1.920e-66	73.24	60S ribosomal protein L27 n=1 Tax=Tribonema minus ...	[more]
A0A024GB05_9STRA	4.250e-63	64.42	Uncharacterized protein n=3 Tax=Albugo TaxID=65356...	[more]
M4B173_HYAAE	1.860e-62	69.44	Uncharacterized protein n=21 Tax=Oomycota TaxID=47...	[more]
A0A2D4BF17_PYTIN	1.250e-60	66.21	60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=...	[more]
A0A0W8DKH9_PHYNI	1.530e-60	66.89	Platelet-activating factor acetylhydrolase IB subu...	[more]
A0A7S4SWS4_9DINO	2.430e-60	69.12	60S ribosomal protein L27 (Fragment) n=1 Tax=Alexa...	[more]
A0A6U1L5V7_9STRA	1.930e-59	63.38	60S ribosomal protein L27 n=1 Tax=Pelagomonas calc...	[more]
A0A812X5C3_SYMMI	2.030e-58	69.29	60S ribosomal protein L27 (Fragment) n=1 Tax=Symbi...	[more]
A0A397BII5_9STRA	7.080e-58	66.20	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]

Pages

Properties


Property Name	Value
Start	0
Stop	1
Cds size	483
Model size	483
Exons	4
Ec32 ortholog	Ec-17_000680.1
Ec32 ortholog description	Ribosomal protein L27e
Hectar predicted targeting category	other localisation
BRITE	br01610,ko00000,ko00001,ko00002,ko03011
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	J
EggNOG OGs	COG2163@1,KOG3418@2759
EggNOG free text desc.	ribosomal large subunit biogenesis
GOs	GO:0000184,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0014070,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030684,GO:0030687,GO:0030867,GO:0031090,GO:0031960,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0033993,GO:0034101,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042221,GO:0042254,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048545,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051385,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097305,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901654,GO:1901700,GO:1904044,GO:1990904
KEGG Module	M00177
KEGG Pathway	ko00563,ko01100,ko03010,map00563,map01100,map03010
KEGG Reaction	R05923,R08107
KEGG ko	ko:K02901,ko:K05288
KEGG rclass	RC00017
Preferred name	RPL27
Seed eggNOG ortholog	2880.D7FLL5
Seed ortholog evalue	1.1e-81
Seed ortholog score	309.3
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1014.150.1	prot_E-siliculosus-1a_F_contig1014.150.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1014 21068..26209 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927516.5687132-CDS-E-siliculosus-1a_F_contig1014:21067..21129	1622927516.5687132-CDS-E-siliculosus-1a_F_contig1014:21067..21129	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 21068..21129 +
1696318563.6446884-CDS-E-siliculosus-1a_F_contig1014:21067..21129	1696318563.6446884-CDS-E-siliculosus-1a_F_contig1014:21067..21129	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 21068..21129 +
1622927516.5790071-CDS-E-siliculosus-1a_F_contig1014:21507..21652	1622927516.5790071-CDS-E-siliculosus-1a_F_contig1014:21507..21652	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 21508..21652 +
1696318563.6561494-CDS-E-siliculosus-1a_F_contig1014:21507..21652	1696318563.6561494-CDS-E-siliculosus-1a_F_contig1014:21507..21652	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 21508..21652 +
1622927516.5894732-CDS-E-siliculosus-1a_F_contig1014:22653..22748	1622927516.5894732-CDS-E-siliculosus-1a_F_contig1014:22653..22748	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 22654..22748 +
1696318563.665598-CDS-E-siliculosus-1a_F_contig1014:22653..22748	1696318563.665598-CDS-E-siliculosus-1a_F_contig1014:22653..22748	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 22654..22748 +
1622927516.6017208-CDS-E-siliculosus-1a_F_contig1014:26028..26209	1622927516.6017208-CDS-E-siliculosus-1a_F_contig1014:26028..26209	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 26029..26209 +
1696318563.6764882-CDS-E-siliculosus-1a_F_contig1014:26028..26209	1696318563.6764882-CDS-E-siliculosus-1a_F_contig1014:26028..26209	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1014 26029..26209 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1014:21068..26209+
coding sequence from alignment at E-siliculosus-1a_F_contig1014:21068..26209+

protein sequence of mRNA_E-siliculosus-1a_F_contig1014.150.1

>prot_E-siliculosus-1a_F_contig1014.150.1 ID=prot_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=161bp
VGLRLAHFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGS
ENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPT
RYQVDIDLKKAVDESAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATG
VKYFFEKLRF*

mRNA from alignment at E-siliculosus-1a_F_contig1014:21068..26209+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1014.150.1 ID=mRNA_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5142bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGGGCTTGCGCTTGGCCCACTTTCCTGTGTGTCTCGCCTGGTTCGAAGC
CATCATGGGGATGTGAGTGTACTGGGTAGCTGGGTTCAGGTTGACATACC
TTGGGTGTCTCCCCTGCTCCTTTGCGTCGATTGTGGTGGCTATTCGTACG
CGATGGTGTGTTTCGAGGCGGTTGCGTCGTGGATGCCCGCCCTCTCTTGT
CTCCCTCCCTCCAGCGGCAGCGTGAACTCGCCTGGTAACACTGCCCCCTG
CGTAAGTTATGCCGGCGTGGCTTCAGCGATAGCACAGCAGTCGACGATTC
CGATAGATCCTGCATGTCTAAGAGTCCCGTGGTGTTCTGGTTGGTTTCCT
TTCTCTTGCGCAACAACTCTCAACCTGACAACCGTCCCTCTCTCTCCCTC
CTGCCCACACACGAACCCCTTGCCGCCTGACGGGGAACAGCATCAAGTCG
GGCAAGGTCGTTGTCCTGCTGGCCGGGCGCTACGCTGGCCGCAAGGCTAT
CGTGGTGAAGCCTTTCGACGAGGGCTCCGAGAACCGCAAGTTCGGCCACG
CCATCGTGGCTGGCATCGACCGCTACCCTCGCAGGGTAAGAAACACAGAA
AATATCTGGAGAAAAACAACGGGTGGCATGCACCCCGCTGCTGCAGTTAC
GGTAGCACTCTCCTGGACGACTATGTCAAGCGCTTAGAAGACGGTATAGC
AGCACTTCGCAATCGATGCCCTTCTACTGTTGTAGCTTTGGTGGTGCAGC
GCTGAAGAAAGAAACGAAGCCTATTGAGACATTCCACGTATGTAGCACCC
GGTGCCTTGTCCAGGAGACACCACTCCCCTTTTCGTACGGAAGACACTAC
ACCCCCTATACCTTGCAAATGGACACAGGAGCAGTCGATGCTTCCATACA
GAGCTGCAGAGATTTTCTTTTGTAATATTCTAGCGGCAATGGGAGTCGTT
GGTATTGTCTGGTGGAGAGCCAAGAAGGATATGGGCACGGTTTTGTGTTG
CTAATGACATATACTCCTCATTAACCACTTTCTATCGGTACTGCTGTACT
GTCGACGTCCGAAAATCAGTCAGGGGGATACAGATACAGCAGTAAAGAGT
CGAACGGTGCAGCATCTCAATCTCATCCAACAGGCGGTGTACGACAAATA
CGCAAATACGGCGCACGTGTCCCCCCCCCCCCGTTGAAAAGAACCTAGGT
TTTCGAGTGCGCCGGTTTTCCCGGCTTCTTCGACTTTTGATGTTTGATGG
CCTTCGCGTTGAAATTCTTATCATACTAGACGGACGTACCGCCGTAGCCT
CTTTTAGTGTGCTACGACGAATAGCGGTGAGTTGTACAGCAAGGAAGAGA
CGTGTAACACCCCGCCCTGACGTTGAACCAACAGAATCGGCGGTGGCCTA
TTTTTTGTTTTGTTTTTTTGCCATTCCGATCCCCACAGCCGACATTCCGA
GGAGCCTTGCTCTTTTTTACTTTTTTTCACCCTGCTGTCTCGCCGGTGTT
GCGTTGATCCAAGCAGCGCATGTGTGTGTAATGCTCTCTCCTCGTTTTTC
CTCTCCTCTATGCATACGACCGGAATGCAAAAACAGGTGACGAAGGCGAT
GAGCAAGGACAAGATCAAGAAGCGCACGAAGCTGAAGCCGTTCGTCAAGT
ACGTCAACGTTAACCACATCATGCCCACCCGGTAAGTCTTGGGACCTAAG
GCACGCACGCTTTCTGTCTCCGACCGCACCTCCCCCAACTCCACTCGCCG
CCCACCCCACCTCTATTTTGATTGACTCAAAGAGGGGGGGCTGGCAGGAG
GTGTACCCTGGAAGCTCGCAGTTTTTTGCGGTTGTCCGTATCGTCCAAAT
CGATATTTCGTAACAAGGAGGAGGGTGTTCGTGTCAAGGAGATGCTTTCG
TCAAAAGCATGTTTTTCTTTGGCAAACGCACCTTCCCCTTTGTTGAGATG
ACGACGGCGACGATACGCTTTAACTACGAGCTTTGCGGTACACTATCCTA
ACGGTGAGAGGGGTGGGGAGTTGAAGGGCAGGAGAGAGAAGGCGTGGTCA
GTGTGCGGCGACGCAGTCCCCGGTCATGGAACGGTTTACCGTACCGTACA
TCCCCGCAAGAGACACCCCCGCTCCACCTCACGCGGGTGATTATCCAGAG
TCGATTGCACAAACAGAAAGAGGAGAGAGTGGGTGTCATTACGCGAAAGA
GCATCTTCGAAAAATCGCGATCCTGAGTTGAGCATTCCACGAATGTTTCC
CTCGTCGAGGTTTTTGCCGATTGTCCTCTTTCGTGTTTTGCACCGCCCTC
CCTTCCTGTGGTGACTATCGAGCTTAGATATTCGTTCCCGCAAGAGGGGG
TGGGTGGCGGTAGTCTCTTGTTGGATGTGCGGCACACAAACCCTGATCCC
ACCCCCCAGCACTTGACCGGCCCCAGTTTCCGTGGAGTGAAGGTGAAAGG
GGTGGGGGTAGGGGGGTTCAACCTGTTCTTGGTCGTGAGCTTTTCGAGTG
ATGAGTGAAGCTGTTGTACCTTCTTTTTTTTTTTGTGGTTTCTCTTTACA
AGTATCTGCAGCGATGCAAACGTCATGCCCGTTGCTGGAACACGCATAAA
TCTGGCCTGTTCCCGATGCGCGTCAAGTGGATCACACACTGCCGCGTATG
TGCGGACGACCATTTGGAATACGACATTTTGATCTCTTTCGAGCAACTCG
TGGCTAACGAACACTTGAAGAAGTCCAACTCGCTCGGGTCTTCAAGAGAG
GCACAAACAAAATCTATCGCCTTTCCGTCGAAATCTCGACGTTGGCGGGG
CTCGCCCGGCGTGCTGCGGTCAGCCCATGTCGGATAGTGTCTCGTGGATT
TTGTTCCGGCCCAGCGTTTGATACGGTTATGTTCGGGTGACCTTTGCATC
TCGATGGGCGTTGGTATTTCCACGTCTGTTTGCTTGTCTGGAGGTACGCG
TACCTTTGGGGGTATTGGTCGCTCCGTCCAATGGACATGCCCAAACGAAG
ATCGGGCACATGATGCCCCGAAGCCATGGTTTTTCGAAGCCGCATACTTA
CGGGGCTGGAAACCTTTATTTTCCCACCGCACGAGAAATGGTGTATCTGG
TCGCGTTCACCTGGAGATAAACATAAGTGAGCAGCGTCTGCAAGACACGA
AAGAAAGCCGTCTCTGCAAAAGGCCAAGACACTTGTCGCACGCGCAAAAA
CCGAGCCCATTTCCGCGAAGAATAGTGTATCGTAAACCTCCCACCCTTTC
CCCCCATAAAATGTGATGGATCAAATTCACATTTTCGGAAACATGGTGTT
TCGGTTGTTCATTTTTTCTCGGCGTATTAGTTTTTGAAACGAAAAAGGTT
CTTTTTGAAAAGAACCACGGCGGATGTTCCCGATGTGTACATCCGACCGG
CGGATTTCACCTGCAGACGTCTCGGGGCGTCGATCACCAGACGGTGATGC
CCGAAAGAATGTTTGGTGTTCGAACGGGAGTCTGGCTAACACGTGTTCTG
TGCTCTTGGCACGATTTCATGAGAGAGAGAGAGCAGCCGTGCCAAGAGCA
CGTGAACGTGTATGGCCAGACTCCCGTTCGAACACATCAACATTCCTTCG
GGCGTCACCGTCGTTTGATCGTCGCACCGGGACGTTTCATGAGCGAGAGA
GAAACGTTAAATGTTTTTTGTCCTTCCCCCGTCCGCTTTCCGGGGGAGAC
GGATGTTGTTCCTGTGGGGCCGCCTCTTACAACAAACCCAGTTTTCGGCA
GCAGCCGTGTGAGAGAATTGCCGCACGCGTGTTCGATCGACCCGATGCTG
CGCCGAAACGTCTCCCAAGCACGCGCTAGTGACACTACCGCAGTATGGTA
TCGCCATGACGCCCTTGCAAGCCTTTTATTGTTCCCCCAAGTATTTTATC
CAGTCTCGTTTTCGAAGAATGAGAAACGGTCGAGTGGAGACGCGAGACCG
ATTCGTATTGCTAGATTGGCTCGTGCTTTTCCTAGATGCGATTAATGCTC
CCCTGAAAATTTTAACCAGTTCTTTTTTTTCTTCTCACAAAAGGGTAGGC
TCTGCTGCCGATATCGGAACGACCTATCCAAAACAGCCTCCTCATTGAGC
CGTCTCCTCATGTGTGTCTCTGGCCTCTTTCGGGTTTCGAAGGGCGCCTT
CTCTCTGGTCTATCTTGTCTGCACCGAGTTGGGGCGGGGGTACGTCCTTT
GCCTTCGTCTATAACTCGTCGGTTAAGTTGCCTTGCGTTGGGCGATATGG
TCGGAGAGATGGATGCTTGGAGGCACGTTTGATTGTTCGAATATACATCT
TCGGCGCCCATACCTTGAGCACATGTAGAAGAGCGCACCTAGCTATCATC
CCGGCGAACTGTAGCGGTTTGACCGCTTGAAAAGAACCGGGGCCAGCATC
TCCAGAGACCCTTCTTGATGATTGTCGAGCTGCCGCCAGTCGAGCGATAT
TAGTCTCGGGGCTGTTGCGCTCGCGAATCCAGTATCGGAATCGAAATGGC
TGGACCGATGTCTCTCTGCGCCCAGAAAGTTTTGTTACGCGATGGAGAAG
CATGCACTCAGAACACAACCCACCCGTCCCTTGGCGCATGAATCGCAAGT
TTCGGGGGGTGTGGTGATGGCTACGGCTTGAACAGTCACGCACAGACGAT
ACGTGTGCGTGGTCCACGTCACTGGCATCGTGCCCTTCTTGGTCCCCCCC
TCAAAGCCATTCCTGACACTGCTCTCCTGGTACAGTTTCACCGCCTCCTC
ACTGTGTTGTGCTGACAACGTGATGGCCCCATGGCGATGTCTTGGACAAG
GGCATAGAGGAGCCGAGAGGTGCCCACACCCGTAATCTCCCGAGAACGGG
CACAAGGCTCTCACTGCCCGTTCAGGGGTAGAAAAGGAGTTTTACGGAAC
GATGCAGATTGCGATGATGCCGCCGCCCTTCCCTTTGCCGCCCTCGTGAC
GGATCGATCAGGTACCAGGTGGACATCGACCTCAAGAAGGCCGTGGATGA
GTCTGCCATCAAGGCCTCCCCGACCGACGTTCGCAAGGCGGTGAGGAAGA
TCTTCGAGGAGAGGTACCTAAACCAGAAGGACGTCAAGTCCGAGAAGAAG
GCCACCGGCGTGAAGTACTTCTTCGAGAAGCTCCGCTTCTAA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1014:21068..26209+

>mRNA_E-siliculosus-1a_F_contig1014.150.1 ID=mRNA_E-siliculosus-1a_F_contig1014.150.1|Name=mRNA_E-siliculosus-1a_F_contig1014.150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=966bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1014:21068..26209+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGGGCTTGCGCTTGGCCCACTTTCCTGTGTGTCTCGCCTGGTTCGAAGC
CATCATGGGGATGTGGGCTTGCGCTTGGCCCACTTTCCTGTGTGTCTCGC
CTGGTTCGAAGCCATCATGGGGATCATCAAGTCGGGCAAGGTCGTTGTCC
TGCTGGCCGGGCGCTACGCTGGCCGCAAGGCTATCGTGGTGAAGCCTTTC
GACGAGGGCTCCGAGAACCGCAAGTTCGGCCACGCCATCGTGGCTGGCAT
CGACCGCTACCCTCGCAGGCATCAAGTCGGGCAAGGTCGTTGTCCTGCTG
GCCGGGCGCTACGCTGGCCGCAAGGCTATCGTGGTGAAGCCTTTCGACGA
GGGCTCCGAGAACCGCAAGTTCGGCCACGCCATCGTGGCTGGCATCGACC
GCTACCCTCGCAGGGTGACGAAGGCGATGAGCAAGGACAAGATCAAGAAG
CGCACGAAGCTGAAGCCGTTCGTCAAGTACGTCAACGTTAACCACATCAT
GCCCACCCGGTGACGAAGGCGATGAGCAAGGACAAGATCAAGAAGCGCAC
GAAGCTGAAGCCGTTCGTCAAGTACGTCAACGTTAACCACATCATGCCCA
CCCGGTACCAGGTGGACATCGACCTCAAGAAGGCCGTGGATGAGTCTGCC
ATCAAGGCCTCCCCGACCGACGTTCGCAAGGCGGTGAGGAAGATCTTCGA
GGAGAGGTACCTAAACCAGAAGGACGTCAAGTCCGAGAAGAAGGCCACCG
GCGTGAAGTACTTCTTCGAGAAGCTCCGCTTCTAAGTACCAGGTGGACAT
CGACCTCAAGAAGGCCGTGGATGAGTCTGCCATCAAGGCCTCCCCGACCG
ACGTTCGCAAGGCGGTGAGGAAGATCTTCGAGGAGAGGTACCTAAACCAG
AAGGACGTCAAGTCCGAGAAGAAGGCCACCGGCGTGAAGTACTTCTTCGA
GAAGCTCCGCTTCTAA