mRNA_E-siliculosus-1a_F_contig10137.145.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: A0A2Z6R562_9GLOM (Uncharacterized protein n=4 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6R562_9GLOM) HSP 1 Score: 86.7 bits (213), Expect = 1.320e-16 Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 1 NVKILIRLADLNEVERAARSLAQAVTQELEEYFRAMPLLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFG-KNHASFS-PSISVDSTMGEWDNIKDIMLTVRRSPAIANRI-IALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLSL 519 N IL D +++ A AV E+ F +L S I++P +P + + LNDYG E++ LID +G N ++ P I D+ EWDN K I+L R+ +I + + + Y N+ L I+ P +S++CERGFS Q IK+ RN+L L +LM + L Sbjct: 513 NHHILFESQDEVDLQVDIMEFAAAVICEINXRFPHRSILSSMKIMNPIEWPKNNESLNDYGEKELEELIDFYGVANEPNYPIPIIDADAIRDEWDNFKAIILANYRNLSIDDLLPLLFQYHSDMYPNILVLISIFYSIPFSSVDCERGFSRQNLIKTDIRNQLNNDTLHMLMMVGL 688
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI0007B8D399 (uncharacterized protein LOC107662498 n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8D399) HSP 1 Score: 76.6 bits (187), Expect = 5.660e-14 Identity = 43/141 (30.50%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 103 AMPLLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFGKNHASFSPSISVDSTMGEWDNIKDIMLTVRRSPAIANRIIALNAQER---KYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLS 516 A ++ F I + +P +ED+L DYG+ ++ L++HF + D+ GEW ++K ++ + + ++ L+ +E Y+N+ L ++ ++ P+++ +CERGFSAQ RIK+S+R+ L VS E L+++S Sbjct: 46 AYTAIDCFKIFNHDTWPENEDVLLDYGSEQVDVLLNHFQE--VLQRGGCQTDNVQGEWRSLKTLVRQTFQDKSYSSLWQTLSTKEPYNVDYKNILHLVEMMLILPISAAQCERGFSAQNRIKNSTRSSLHVSTTEDLIQIS 184
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: A0A8H3XKI6_GIGMA (Zinc finger protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3XKI6_GIGMA) HSP 1 Score: 74.7 bits (182), Expect = 1.110e-13 Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 112 LLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFGKNHAS--FSPSISVDSTMGEWDNIKDIMLTVRRSPAIANRI-IALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLSL 519 LL S IL+P +P D+ +L +Y E++ LI + K+H + I D EW+ K+++ + ++ + N + I + + Y N+ KL +I P +SIECERGFS Q IK+S RNR+ L L + +SL Sbjct: 4 LLNSMQILNPNKWPKDKKILQNYRELELEELIKVYEKSHWPNYLNGIIDADKIRQEWNLFKEVVSSNYQNLDVNNLLPIIFDQHQEFYPNIIKLLEIIYSIPFSSIECERGFSKQNLIKTSHRNRINNDTLHLFLSISL 142
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI0007B919CC (uncharacterized protein LOC107662499 n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B919CC) HSP 1 Score: 76.6 bits (187), Expect = 1.540e-13 Identity = 43/141 (30.50%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 103 AMPLLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFGKNHASFSPSISVDSTMGEWDNIKDIMLTVRRSPAIANRIIALNAQER---KYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLS 516 A ++ F I + +P +ED+L DYG+ ++ L++HF + D+ GEW ++K ++ + + ++ L+ +E Y+N+ L ++ ++ P+++ +CERGFSAQ RIK+S+R+ L VS E L+++S Sbjct: 153 AYTAIDCFKIFNHDTWPENEDVLLDYGSEQVDVLLNHFQE--VLQRGGCQTDNVQGEWRSLKTLVRQTFQDKSYSSLWQTLSTKEPYNVDYKNILHLVEMMLILPISAAQCERGFSAQNRIKNSTRSSLHVSTTEDLIQIS 291
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI0007AD13DB (zinc finger protein 862-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007AD13DB) HSP 1 Score: 72.0 bits (175), Expect = 2.920e-12 Identity = 46/142 (32.39%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 112 LLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFGKNHASFSPSISVDSTMGEWDNIKDIMLTVRRS------PAIANRIIALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLSL 519 +L+SF +L+P +P ++ L G + L+ HF K I+ + EW +K + VR++ + ++ + ++ Y+N+ +L +I +V P+++ +CERGFSAQ RIK+S+R+ L VS E LMR+SL Sbjct: 46 ILDSFRVLNPDTWPEEQANLLTSGDDSIADLVKHFEKPLTEAGCKIA--TIQDEWQGLK---ILVRQNFKDKTYSGLWEMLMTKDPYKQDYKNILELVQIMLVLPISAAQCERGFSAQNRIKNSTRSCLGVSTTEDLMRISL 182
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI0018D63CC8 (zinc finger protein 862-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D63CC8) HSP 1 Score: 72.8 bits (177), Expect = 8.140e-12 Identity = 51/180 (28.33%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 31 LNEVERAARSLAQAVTQELEEYFRAM--PLLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFG---KNHASFSPSISVDSTMGEWDNIKDIMLTVRRSP---AIAN---------RIIALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLSL 519 L +VE++ + A + L + F + P+L++F + +P N+P D ++L D+GT+E+QT+ +HF + + + S+ + EW + ++R IAN +++ + +++ N+ L KI +V P+ S E ERGFS R+K+ R+RL LM L L Sbjct: 376 LEDVEKSVSCMVSATAEALNQRFASFNDPVLKAFRVFEPMNWPHDIEVLADFGTTEIQTITNHFSDLLNRNGTDTTSMEI-----EWTQLLLSCRELKREQPDRCIANNERFQAFWKKVLQTYNESQRFANILTLVKIMLVLPIHSAEAERGFSLMGRVKNDWRSRLHPETTSNLMALKL 550
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI001C09BFD5 (zinc finger protein 862-like isoform X1 n=3 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C09BFD5) HSP 1 Score: 71.6 bits (174), Expect = 1.910e-11 Identity = 45/162 (27.78%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 40 VERAARSLAQAVTQELEEYFRAMPLLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFGKNHASFSPSISVDSTMGEWDNIKDIMLTVRRSPAIAN---RIIALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLS 516 VE + E ++Y ++ F+I + +P + D L +YG+ +++ L++HF SF +++ EW ++K ++ + + + ++ + Y+N+ L +I ++ P+++ +CERGFSAQKRIKSS R+ L VS L+R+S Sbjct: 278 VEALNTRFGSLINAETQDY----SVVNCFTIFNHDTWPENSDELLNYGSDKVEALVEHFSDVLTSFG--CQLEAIQEEWQSVKALISHTFQDKSYRSLWQMLLTKEPYKTDYKNLLHLVEILLILPISAAQCERGFSAQKRIKSSLRSSLHVSTTVDLIRIS 433
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI0003F0E663 (uncharacterized protein LOC102807375 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0E663) HSP 1 Score: 70.5 bits (171), Expect = 3.620e-11 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 85 LEEYFRAMPLLESFSILDPQNFPV-DEDLLNDYGTSEMQTLIDHFGKNHAS----FSPSISVDSTMGEWDNIKDIMLTVRRSPAIAN---RIIALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLSL 519 L++ F + LL +F I P N P D YG E++ L +H+G A+ FSP I EW ++K I+ + R + +I+ N Y N LAKI ++ P+++ +CERGFS IK+ R L VS + LM LSL Sbjct: 151 LKDRFDNLGLLGAFKIFVPNNLPPPSSDEYRTYGNQEIEILCEHYGAEKATDNKVFSPVIEASDLKDEWLDVKGILSSNFRGMSFQTAWQQILCTNILS-SYPNTIILAKIALIVPVSTADCERGFSRYNLIKNKLRASLKVSSVSCLMTLSL 302
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: R7UY53_CAPTE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UY53_CAPTE) HSP 1 Score: 68.6 bits (166), Expect = 2.000e-10 Identity = 49/153 (32.03%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 70 AVTQELEEYFRAMPLLESFSILDPQNFPVD-EDLLNDYGTSEMQTLIDHFGKNHASFSPSISVDSTMGEWDNIKDIMLTVRRSPAIANRIIALN--AQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLSL 519 +V + LEE F+ M L++F I DP VD + L++ ++++T+ + F P IS + EW ++++L ++ ++AL A+ N+ ++A I +V P+++ +CERGFSA KRIK+ RNRL + L LM ++L Sbjct: 221 SVMENLEERFQDMGFLKNFGIFDPCLIQVDGQTFLDEEQQAQLKTISETF--------PGISHSACHAEWLIFREVLLDLQEKGE--QYVVALRRAAEGTTLPNLRRIAHIAMVLPVSTADCERGFSAMKRIKTEQRNRLIDTTLNNLMMITL 363
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Match: UPI0020153BE3 (zinc finger protein 862-like n=1 Tax=Alosa alosa TaxID=278164 RepID=UPI0020153BE3) HSP 1 Score: 68.6 bits (166), Expect = 2.470e-10 Identity = 44/162 (27.16%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 40 VERAARSLAQAVTQELEEYFRAMPLLESFSILDPQNFPVDEDLLNDYGTSEMQTLIDHFGKNHASFSPSISVDSTMGEWDNIKDIMLTVRRSPAIAN---RIIALNAQERKYRNVYKLAKIYIVQPLASIECERGFSAQKRIKSSSRNRLAVSRLELLMRLS 516 VE + E ++Y ++ F+I + +P + D L +YG+ +++ L++HF SF +++ EW ++K ++ + + + ++ + Y+N+ L +I ++ P+++ +CE GFSAQKRIKSS R+ L VS L+R+S Sbjct: 535 VEALNTRFGSLINAETQDY----SVVNCFTIFNHDTWPENSDELLNYGSDKVEALVEHFSDVLTSFG--CQLEAIQEEWQSVKALISHTFQDKSYRSLWQMLLTKEPYKTDYKNLLHLVEILLILPISAAQCECGFSAQKRIKSSLRSSLHVSTTVDLIRIS 690 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10137.145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10137.145.1 >prot_E-siliculosus-1a_F_contig10137.145.1 ID=prot_E-siliculosus-1a_F_contig10137.145.1|Name=mRNA_E-siliculosus-1a_F_contig10137.145.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=173bp NVKILIRLADLNEVERAARSLAQAVTQELEEYFRAMPLLESFSILDPQNFback to top mRNA from alignment at E-siliculosus-1a_F_contig10137:35..724+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10137.145.1 ID=mRNA_E-siliculosus-1a_F_contig10137.145.1|Name=mRNA_E-siliculosus-1a_F_contig10137.145.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=690bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10137:35..724+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10137:35..724+ >mRNA_E-siliculosus-1a_F_contig10137.145.1 ID=mRNA_E-siliculosus-1a_F_contig10137.145.1|Name=mRNA_E-siliculosus-1a_F_contig10137.145.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1038bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10137:35..724+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |