mRNA_E-siliculosus-1a_F_contig10128.136.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: A0A509DRY8_9HYPH (Uncharacterized protein n=1 Tax=Thalassocella blandensis TaxID=2584524 RepID=A0A509DRY8_9HYPH) HSP 1 Score: 199 bits (505), Expect = 1.630e-60 Identity = 99/151 (65.56%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 25 GRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSR-GLADGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFSPV 474 GRPPGD R+AEEII+DNP LKNLG+QKDIKRD L ++CGDWT +N DP+SRADAAYNM+KVLN+ID + D GN R DG+I+GITS GDARHGTEAG LKDFAEQG+G + ++LD+TND VR DGSNKDNF+ + ++G+IF+ + Sbjct: 85 GRPPGDNRSAEEIINDNPALKNLGNQKDIKRDELMKRCGDWTENNPDPKSRADAAYNMSKVLNYIDNTQDRQGNERQNSGDGNIEGITSDGDARHGTEAGMLKDFAEQGYGSLPETRQLDQTNDTHVRLDGSNKDNFQWGMGEMGKIFNKI 235
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: A0A509DU11_9HYPH (Uncharacterized protein n=1 Tax=Thalassocella blandensis TaxID=2584524 RepID=A0A509DU11_9HYPH) HSP 1 Score: 197 bits (502), Expect = 4.750e-60 Identity = 102/159 (64.15%), Postives = 124/159 (77.99%), Query Frame = 1 Query: 1 RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRGLA-DGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFSPV 474 RPT GRPPGD R+AEEII+DNP LKNLG+QKDIKR+ LK+QCGDWT N DP+SRADAAYNM+KVLN+ID + + +G R A DG+I+GIT GDARHGTEAG LKDFAEQG+G ++LDKTND VR DGSNKDNF+ F +VG++ + + Sbjct: 80 RPTQ--ASGRPPGDNRSAEEIINDNPALKNLGNQKDIKREELKKQCGDWTDANPDPKSRADAAYNMSKVLNYIDNAQNREGGERKNAGDGNIEGITKDGDARHGTEAGMLKDFAEQGYGSLPASRQLDKTNDTHVRLDGSNKDNFQWFAGEVGKVLNKI 236
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: A0A2L0ILA8_9GAMM (Uncharacterized protein n=6 Tax=Enterobacterales TaxID=91347 RepID=A0A2L0ILA8_9GAMM) HSP 1 Score: 192 bits (488), Expect = 9.450e-58 Identity = 101/165 (61.21%), Postives = 124/165 (75.15%), Query Frame = 1 Query: 1 RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRGLA--DGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 RPT EN GRPPGD R+AE+I+D+NPVLKNLG+QKDIKRD LKE+ GDWT+DN DP+SRADAAYNM+ VLN + G ND DG SRG +G I+GIT GDARHGTEAG LKD AE+G D L +T D VRKDG+NKDNF+ + ++G + S P+L++ Sbjct: 108 RPTEENLTGRPPGDNRSAEQILDENPVLKNLGNQKDIKRDQLKERFGDWTADNPDPKSRADAAYNMSCVLNSVKGLNDRDGESRGDVHNNGKIEGITKDGDARHGTEAGVLKDIAEKGLSALPADGNLPQTRDTHVRKDGTNKDNFQWGMGEIGRVLSNIPILKS 272
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: UPI00077C253E (hypothetical protein n=1 Tax=Serratia ficaria TaxID=61651 RepID=UPI00077C253E) HSP 1 Score: 187 bits (476), Expect = 2.450e-56 Identity = 102/165 (61.82%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 1 RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRG-LAD-GDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 +PT EN GRPPGDTR+A+E+ID NPVLKNLGDQKDIK D LK++ GDWT +N DP SRADAAYNMA+VLN I G N+ +G+SRG LAD G I GIT GDARHGTEAG LKD AEQG + L +TND VR DG+NKDNF+ + ++G++ S P+L++ Sbjct: 82 KPTDENLHGRPPGDTRSAQEVIDANPVLKNLGDQKDIKPDELKQRFGDWTENNPDPASRADAAYNMARVLNNIKGLNNREGDSRGDLADNGKIDGITKGGDARHGTEAGVLKDIAEQGLKALPGNGNLPQTNDSHVRLDGTNKDNFQWAMGEIGKVLSNIPILKS 246
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: A0A1M7KT93_9PSED (Uncharacterized protein n=4 Tax=Pseudomonas TaxID=286 RepID=A0A1M7KT93_9PSED) HSP 1 Score: 189 bits (481), Expect = 4.160e-56 Identity = 98/152 (64.47%), Postives = 114/152 (75.00%), Query Frame = 1 Query: 25 GRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRGLAD-GDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFSPVL 477 GRP GDTRTAE+IIDDNP+LKNLG QKDIKR + GDW+ +N DPESRADAAYN AKVLNWI+ S+ +DG +R D D+QGIT GDARHGTEAG KDF EQG+ DD RLDKTND VR DGSNKDN + F+ +VG+ PV+ Sbjct: 163 GRPEGDTRTAEQIIDDNPILKNLGYQKDIKRTEAYARIGDWSENNKDPESRADAAYNAAKVLNWINSSDQADGAARQCVDDSDLQGITHDGDARHGTEAGNWKDFVEQGYTALKDDHRLDKTNDSHVRADGSNKDNVQAFLGEVGKNIWPVV 314
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: UPI00034804DF (hypothetical protein n=1 Tax=Erwinia toletana TaxID=92490 RepID=UPI00034804DF) HSP 1 Score: 188 bits (477), Expect = 8.180e-56 Identity = 100/165 (60.61%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 1 RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRG--LADGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 +P+ EN GRP GD RTA++IIDDNPVLKNLGDQKDIKRD LK++ GDWT DN DP+SRADAAYNM+ VLN I G N SDG+ R A+ I+GIT GDARHGTEAG LKD AEQG + D++ L +T+D VRKDG+NKDNF+ + ++G++ S P+L++ Sbjct: 133 KPSEENLQGRPVGDNRTADQIIDDNPVLKNLGDQKDIKRDELKQRFGDWTEDNKDPKSRADAAYNMSCVLNSIKGLNGSDGSERTEISANDKIEGITKDGDARHGTEAGVLKDVAEQGLKMLPDNKNLPETSDTHVRKDGTNKDNFQWGMGEIGKVLSNIPILKS 297
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: A0A545U3J7_9GAMM (Uncharacterized protein n=1 Tax=Exilibacterium tricleocarpae TaxID=2591008 RepID=A0A545U3J7_9GAMM) HSP 1 Score: 186 bits (472), Expect = 1.130e-55 Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 1 Query: 25 GRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSR-GLADGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 GRP GD RTAE+II+DNPVLKNLGDQKDIKR+ LK+QCGDWT N D E RA+AAYNMAKVLN+ID + +G R D +I+GITS GDAR GTEAG LKDFAEQG+G ++ +LD+T D VR DGSNKDNF+ + ++G++ S P+L++ Sbjct: 85 GRPKGDNRTAEQIIEDNPVLKNLGDQKDIKREELKKQCGDWTEANPDKEDRANAAYNMAKVLNYIDTCQNREGGDRKNSGDANIEGITSCGDARRGTEAGMLKDFAEQGYGSLPENHQLDQTKDSHVRLDGSNKDNFQWVMGEIGKVLSKIPILRS 240
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: L0MLA2_9GAMM (Uncharacterized protein n=14 Tax=Serratia TaxID=613 RepID=L0MLA2_9GAMM) HSP 1 Score: 186 bits (473), Expect = 1.230e-55 Identity = 103/164 (62.80%), Postives = 122/164 (74.39%), Query Frame = 1 Query: 4 PTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRG-LAD-GDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 PT +N GRP GDTR+A+EIID NPVLKNLGDQKDIKRD LK++ GDWT DN DP SRADAAYNMA+VLN I G N+ +G SRG LAD G I GIT GDARHGTEAG LKD AEQG + L +TND VR DG+NKDNF+ + ++G+ S P+L++ Sbjct: 104 PTDDNLQGRPAGDTRSAQEIIDANPVLKNLGDQKDIKRDELKKRFGDWTEDNPDPASRADAAYNMARVLNSIKGLNNREGGSRGDLADNGKIDGITKDGDARHGTEAGVLKDIAEQGLKALPSNGNLPQTNDSHVRLDGTNKDNFQWAMGEIGKALSNIPILKS 267
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: UPI000468E5FB (hypothetical protein n=1 Tax=Pantoea sp. IMH TaxID=1267600 RepID=UPI000468E5FB) HSP 1 Score: 187 bits (475), Expect = 2.000e-55 Identity = 99/165 (60.00%), Postives = 121/165 (73.33%), Query Frame = 1 Query: 1 RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRGLA--DGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 RPT EN GRPPGD R+AE+I+D+NPVLKNLG+QKDIKRD LKE+ GDWT N DP+SRADAAYNMA VLN + G D +G RG +G ++GIT SGDARHGTEAG LKD AE+G D L +T D VRKDG+NKDNF+ + +VG + S P+L++ Sbjct: 141 RPTEENLTGRPPGDNRSAEQILDENPVLKNLGNQKDIKRDRLKERFGDWTESNPDPKSRADAAYNMACVLNSVKGLKDREGGDRGSVHTNGKLEGITKSGDARHGTEAGVLKDIAEKGLSALPADGNLPQTKDTHVRKDGTNKDNFQWGMGEVGRVLSNIPILKS 305
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Match: A0A1W6BAU5_9GAMM (Uncharacterized protein n=2 Tax=Pantoea alhagi TaxID=1891675 RepID=A0A1W6BAU5_9GAMM) HSP 1 Score: 185 bits (470), Expect = 1.010e-54 Identity = 99/165 (60.00%), Postives = 120/165 (72.73%), Query Frame = 1 Query: 1 RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTSDNTDPESRADAAYNMAKVLNWIDGSNDSDGNSRG--LADGDIQGITSSGDARHGTEAGKLKDFAEQGFGVFSDDQRLDKTNDKQVRKDGSNKDNFEHFVDQVGEIFS--PVLQA 483 RPT EN GRPP D R+AE+I+D+NPVLKNLG+QKDIKRD LKE+ GDWT+DN DPESRADAAYNMA VLN I G D +G RG +G I+GIT GDARHGTEAG LKD AE+G D L +T D VRKDG+ KDNF+ + ++G + S P+L++ Sbjct: 137 RPTEENLTGRPPDDNRSAEQILDENPVLKNLGNQKDIKRDQLKERFGDWTADNPDPESRADAAYNMACVLNSIKGLKDREGGDRGDVHTNGKIEGITKDGDARHGTEAGVLKDIAEKGLSALPADGNLPQTKDTHVRKDGTTKDNFQWGMGEIGRVLSNIPILKS 301 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10128.136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10128.136.1 >prot_E-siliculosus-1a_F_contig10128.136.1 ID=prot_E-siliculosus-1a_F_contig10128.136.1|Name=mRNA_E-siliculosus-1a_F_contig10128.136.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=162bp RPTAENTDGRPPGDTRTAEEIIDDNPVLKNLGDQKDIKRDLLKEQCGDWTback to top mRNA from alignment at E-siliculosus-1a_F_contig10128:135..620+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10128.136.1 ID=mRNA_E-siliculosus-1a_F_contig10128.136.1|Name=mRNA_E-siliculosus-1a_F_contig10128.136.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=486bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10128:135..620+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10128:135..620+ >mRNA_E-siliculosus-1a_F_contig10128.136.1 ID=mRNA_E-siliculosus-1a_F_contig10128.136.1|Name=mRNA_E-siliculosus-1a_F_contig10128.136.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=972bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10128:135..620+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |