mRNA_E-siliculosus-1a_F_contig1012.131.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: D8LBR4_ECTSI (CYTOSOL_AP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR4_ECTSI) HSP 1 Score: 812 bits (2098), Expect = 1.230e-292 Identity = 484/500 (96.80%), Postives = 485/500 (97.00%), Query Frame = 2 Query: 59 MPISFHHVDELSSPPSNLICIDRKSVLASTTVSFASEHPGQAAFLRDIVSGLTPVCARPSTAETFFPRDSSGSXXXXXXXXXXXXXXAGPRRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXG-RRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 MPISFHHVDELSSPPSNLICIDRKSVLASTTVSFASEHPGQAAFLRDIVSGLTPVCARPSTAETFFPRDSSGSXXXXXXXXXXXXX AGPRRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXX RGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAV AQ+A XXXXXXXX G RRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR Sbjct: 1 MPISFHHVDELSSPPSNLICIDRKSVLASTTVSFASEHPGQAAFLRDIVSGLTPVCARPSTAETFFPRDSSGSXXXXXXXXXXXXX-AGPRRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXX-----RGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVKAQMAAAXXXXXXXXGSGWVGGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 494
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A6H5KET4_9PHAE (CYTOSOL_AP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET4_9PHAE) HSP 1 Score: 650 bits (1677), Expect = 7.350e-229 Identity = 418/497 (84.10%), Postives = 423/497 (85.11%), Query Frame = 2 Query: 134 VLASTTVSFASEHPGQAAFLRDIVSGLTPVCARPSTAETFFPRDSSGSXXXXXXXXXXXXXXAGPRRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------RGSVCFVG------------KGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 VLASTTVSFASEH GQAAFLRDIVSGLTPVCARPSTAETFFPRDS+G XXXXXXXXXXX AGPRRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAG KRPGAGAAS PAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVA GLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAA XXXXXXXXXXXXXXXXXXXXXXXXXX X RG +VG + D G + PGMKRDMGGAAAILGAFQAAV AQ+AXXXXXXXX RRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR Sbjct: 6 VLASTTVSFASEHRGQAAFLRDIVSGLTPVCARPSTAETFFPRDSAGGXXXXXXXXXXXRSAAGPRRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGW--------------KRPGAGAASTPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVASGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXRSXXXXXXXXXXXXRGRRAWVGVLRGQGDHLRHWRAFDQDEDGNAC------PGMKRDMGGAAAILGAFQAAVKAQMAXXXXXXXXSGWEGR--RRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 480
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A835YXJ6_9STRA (CYTOSOL_AP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ6_9STRA) HSP 1 Score: 336 bits (861), Expect = 5.560e-107 Identity = 207/407 (50.86%), Postives = 253/407 (62.16%), Query Frame = 2 Query: 332 RVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEF 1552 R+ + ALP+ CSRHN PAQPHAI D +S G G ++V++ L HPS+A AAGCAVARAFP Y+ KR A AA+V VY+ + A+R + AEGIQ A LVDTP N+L+ +V + GLP ++VI G++LE +G G+YGVGKAAV PPA+VVLSY G A G V +VGKGI+YDTGGLSIK+K GMPGMK DMGG+AA+L AF AAV RPL A+LC+AENSV+A ATRPDDIH +YSG+TVEINNTDAEGRLVL+DGVA+AA+ L P+VI+DMATLTGAQGV TG RHA++ N+E LE A + R GDL PV Y PEFF+ EF Sbjct: 40 RLCVAALPKACSRHNCPAQPHAITDALKSNKGRGDLSVILLLAHPSHAAAAGCAVARAFPRYA---LKRERAAAANV---------DVYMGC--DDTEALR-QIGLIAEGIQTCAELVDTPCNILNVPEYVRRVQELVSGLPN--VTIRVISGEDLEKEGLRGIYGVGKAAVGPPAMVVLSYTLPGGAVGKP------------------------------VVWVGKGIVYDTGGLSIKSKDGMPGMKTDMGGSAAVLCAFVAAVKRGGL----------------NRPLSAILCMAENSVSAAATRPDDIHVMYSGKTVEINNTDAEGRLVLADGVAWAAKQLQPAVIVDMATLTGAQGVATGHRHAAMYCNNEKLEA-AAQARRQCGDLTFPVPYAPEFFAAEF 382
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A1J5DBX2_9DELT (CYTOSOL_AP domain-containing protein n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1J5DBX2_9DELT) HSP 1 Score: 335 bits (860), Expect = 8.350e-107 Identity = 197/409 (48.17%), Postives = 253/409 (61.86%), Query Frame = 2 Query: 329 RRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 +++ C LPE CSR+NSPA+PHAI+D +++ G G+ ++++ LD +++FAAGCA+AR P+YS RK G R V V L P RADL+A+ I+ LVD P N L+TT FV+ A +A L + VI G+ L+ G+GGL+ VGK A PPALVVLS++P GA+ + +VGKG++YDTGGLS+K + M GMK DMGGAAA GAF+AAV + + P+HA+LCLAENS+ A RPDD+ TLYSG+TVEINNTDAEGRLVL DGVAYAA+HL PSVI+D+ATLTGAQ V TG+RHA+++SNDEALE AV G+SSGDL H + YCPEFF EFR Sbjct: 50 KQLVACVLPEPCSRYNSPARPHAISDLVKNVYGKGTTSILLALDEDAHSFAAGCALARTLPVYS---RKENGK----------DREVVVALLGPNGLVDPTRADLAASI--IRNVGALVDMPTNELNTTVFVDRARKLAESLGAQ---ITVIEGEALDQAGYGGLWNVGKTAPNPPALVVLSHIPAGASGEP-------------------------------IVWVGKGVVYDTGGLSLKERAHMVGMKCDMGGAAAAFGAFEAAVRSN-----------------HKAPVHAILCLAENSIGPEALRPDDVITLYSGKTVEINNTDAEGRLVLGDGVAYAAKHLSPSVIVDLATLTGAQLVATGKRHAAIMSNDEALEARAVAAGKSSGDLTHALPYCPEFFRSEFR 392
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A2E7M784_9DELT (Peptidase M17 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7M784_9DELT) HSP 1 Score: 335 bits (860), Expect = 2.420e-106 Identity = 226/501 (45.11%), Postives = 285/501 (56.89%), Query Frame = 2 Query: 56 TMPISFHHVDELSSPPSNLICIDRKSVLASTTVSFASEHPGQAAFLRDIVSGLTPVCARPSTAETFFPRDSSGSXXXXXXXXXXXXXXAGPRRVALCALPEVCSRHNSPAQPHAIADCARS-ISGSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 T +S+ D S+L+ + R+ L + ++ A G L ++ GL P ST T +P D P +V +C LPE CSRHNSPA+PHAI R + G VAV++ LD P + FAAGCAVARA P +++ S K P A A P R V V V A + ++ AAE I+ A LVD P + L+T AFV EA A+A + ++VIRG +L G+GGL+GVGKAAV PPALVVL + P+GA ++ +VGKGI+YDTGGLSIK K MPGMKRDMGGAAA+LGAF AAV A L+ LLCLAENSV ATRPDDI +YSG++VE+NNTDAEGRLVL+DGVA+A RHLGP VI+D+ATLTGAQ V TG+RH +++ ND+ LE A+ GR SGDLVHP+ YCPEFF EF+ Sbjct: 2 TTQLSYVLADVAVGESSSLVLVGRRDALLAEALA-AVVPTGVRDTLPRMLDGLKPGDRGAST--TTWPADCQ------------------PNQVVVCLLPEPCSRHNSPARPHAITHQLREHLPKVGRVAVLLALDEPEHYFAAGCAVARAIPSFTAKS-KEPEAEAG------PDREVAVAF-VTEGAEALLLGRVATAAEAIRSAGALVDMPTSTLNTDAFVAEARALADEVGAE---IEVIRGQDLADAGYGGLWGVGKAAVYPPALVVLRHEPEGAQR--------------------------------TLAWVGKGIVYDTGGLSIKGKMHMPGMKRDMGGAAAVLGAFGAAVRAGFPDR-----------------LYGLLCLAENSVGPEATRPDDILEMYSGKSVEVNNTDAEGRLVLADGVAHAVRHLGPDVIVDLATLTGAQMVATGQRHGAIVCNDDELEAAAIRAGRVSGDLVHPLPYCPEFFRGEFK 421
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A2E8S358_9DELT (Peptidase M17 n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E8S358_9DELT) HSP 1 Score: 334 bits (856), Expect = 1.370e-105 Identity = 212/413 (51.33%), Postives = 258/413 (62.47%), Query Frame = 2 Query: 332 RVALCALPEVCSRHNSPAQPHAIADCARSIS-GSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWG----AVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 ++++C LPE CSRHNSPA+ HAI ++ G G V + LD +A AAGCAVARAFP YS S+ ++P TV++ L EA G A+R + A E ++LAARLVD P + L+T FVEEA AV+R L S ++V+R ELE GFGGL VG A+V+ PALV+LS+ P+GA ++ +VGKGI+YDTGGLSIK KT MPGMK DMGGAAA+LGAFQA V + LHA+LCLAENSV +ATRPDDI LYSGRTVEINNTDAEGRLVLSDGVAYA LG VI+D+ATLTGAQ + TGRRHA+++SN E+LE+ AV GR SGDLVHP+ YCPEFF EFR Sbjct: 89 QLSVCVLPENCSRHNSPARVHAITKQVKAHGLGKGRTRVWVALDSDDHARAAGCAVARAFPTYSRKSK-------VTMP------TVEISLIS--EAGGTIDRAIRVRVEQAVESVRLAARLVDMPTSELNTDEFVEEAQAVSRELGTS---IRVLRARELEKGGFGGLVSVGHASVKEPALVILSHEPEGATK--------------------------------TIAWVGKGIVYDTGGLSIKGKTFMPGMKCDMGGAAAVLGAFQAIVQGGFD-----------------QRLHAILCLAENSVGPDATRPDDIIQLYSGRTVEINNTDAEGRLVLSDGVAYAQHDLGADVIVDLATLTGAQMIATGRRHAAIVSNSESLEQAAVGAGRISGDLVHPLPYCPEFFRGEFR 434
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A4D9D864_9STRA (CYTOSOL_AP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D864_9STRA) HSP 1 Score: 333 bits (855), Expect = 1.040e-104 Identity = 214/448 (47.77%), Postives = 258/448 (57.59%), Query Frame = 2 Query: 332 RVALCALPE-VCSRHNSPAQPHAIADCARSIS-GSGSVAVVMCLDHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVR----------------------------------ADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPP----SMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 RV L LP SRHN PA+PHA + +S++ G + +++ L +A A G AVARAFP+YS RK G+ +AS P R V+V + +EA + + + A A GI+++ARLVD P N + T A VEEA V L ++ V+RG+EL +GFGGLYGVGKAA PPALVVLS +P SV +VGKGI+YDTGGLSIKTKTGMPGMKRDMGGAAAIL AF+ A +RPLHA+LCLAENSVAA ATRPDDIH +YSG+TVEINNTDAEGRLVL DGVAYA +HL PSV++DMATLTGAQGV TG RHA++ N+E LE AVE GR++GDL HPV Y PEFF EFR Sbjct: 92 RVTLGCLPSGEASRHNCPAKPHAATEIVKSVANGEAPLRILLALTSADHAVALGTAVARAFPMYS---RKSNGSSSASKP----PRNVEVVFNMTMEALASCTFLGGQGVNFSSDGGSDEPGKQGEHQVFDASMTMVSRVEAMAAGIRMSARLVDAPANEMHTDAMVEEARQVLHRLRQLNMRDSVSMTVLRGEELREKGFGGLYGVGKAAEHPPALVVLSLVP----------------------RANERPVSTPDTLSPSVVWVGKGIVYDTGGLSIKTKTGMPGMKRDMGGAAAILAAFEVAARLGYR----------------KRPLHAILCLAENSVAAKATRPDDIHEMYSGKTVEINNTDAEGRLVLGDGVAYAVQHLAPSVLVDMATLTGAQGVATGLRHAALYCNNERLEAAAVEVGRATGDLTHPVPYAPEFFQHEFR 494
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A2E9QWA3_9DELT (Peptidase M17 n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2E9QWA3_9DELT) HSP 1 Score: 330 bits (847), Expect = 1.440e-104 Identity = 202/413 (48.91%), Postives = 252/413 (61.02%), Query Frame = 2 Query: 326 PRRVALCALPEVCSRHNSPAQPHAIADCARSIS-GSGSVAVVMCLDHPSYAFAAGCAVARAFPLYS-STSRKRPGAGAASVPAPPPSRTVQVYLR-VPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 P+R+A+ LPE CSRHNSPA PHA+ +S + G G V ++ LD YAFA CA+ARAFPL+S TS K P Q+ +R V E + L AAEG++ A RLVDTP L TTAF +EA +A+ L K I G EL QG GGL+ VG+ A++PP LVVLS+ P+GA + +VGKGI+YDTGGLSIK KT MPGMK DMGGAA ++ AF AAV + LHALLCLAEN+V ++ RPDDI TLYSG+T+EINNTDAEGRLVL DGVAYA++HL P VI+DMATLTGAQ + TG+RHA+++ ND+ALE+ A+ G+ SGDLVHP+ YCPEFF +EF+ Sbjct: 71 PQRLAIGVLPEHCSRHNSPAHPHAVTSLVKSNAPGKGDVEIIAVLDKAEYAFATACAIARAFPLFSRKTSSKAPQ---------------QIAIRFVAREGELPATSILEHAAEGVRRAGRLVDTPTAELHTTAFAKEAEELAKELGVEY---KAITGQELAEQGLGGLWNVGRTAMQPPRLVVLSHNPEGATE--------------------------------TYAWVGKGIVYDTGGLSIKGKTTMPGMKCDMGGAAGVMSAFAAAVKIGFP-----------------QRLHALLCLAENAVGPDSFRPDDIITLYSGKTIEINNTDAEGRLVLGDGVAYASKHLNPDVIVDMATLTGAQLMATGKRHAAIVCNDDALEQKAIAAGKVSGDLVHPLPYCPEFFRKEFK 416
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A5D6YFJ4_9STRA (CYTOSOL_AP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFJ4_9STRA) HSP 1 Score: 327 bits (837), Expect = 2.340e-102 Identity = 211/426 (49.53%), Postives = 256/426 (60.09%), Query Frame = 2 Query: 320 AGPRRVALCALPEVCSRHNSPAQPHAI-----------ADCARSISGSGSVAVVMCLDHPSYA---FAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVARGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEFR 1555 AG V L ALP SR NS A+PHAI A A +GS V++ L PS++ FAAG AVARA P Y+ K G AS A + Q+ + + RA L+ A+GIQLAARL D PPN L + FV EAL VA+ + VI+G+EL +GFGG+YGVGKAA PALV LS++P GAAA V VGKGI+YDTGGLSIKT M GMKRDMGGAA +L AF+AAV+A+ R PLH +LC+AEN+V ATRPDDIHTLYSG+TVEINNTDAEGRLVL+DGVAYA +HL P V++DMATLTGAQG+ TG+R AS+ +NDE LE++AV G++SGDLVHP+ Y PEFF EF+ Sbjct: 83 AGAFPVTLHALPRQVSRANSLARPHAIHSFVKNNRALIAPAAAEGAGSDDETVLVALVLPSHSETWFAAGAAVARAAPSYAHKQTKTSGLPPASADAAVATDADQLEVVYSQPLSESERALLAHTADGIQLAARLTDAPPNELHSDTFVAEALRVAKRTGSTAV---VIQGEELNVRGFGGIYGVGKAATHQPALVALSHVPVGAAADAP-----------------------------GVALVGKGIVYDTGGLSIKTGGFMVGMKRDMGGAAGLLAAFEAAVLAK--------------NTTDRTPLHVVLCIAENAVGPLATRPDDIHTLYSGKTVEINNTDAEGRLVLADGVAYAVKHLHPKVVVDMATLTGAQGIATGQRIASIYTNDEDLERLAVRAGKASGDLVHPMPYAPEFFRGEFK 462
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Match: A0A7R9UC92_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC92_9STRA) HSP 1 Score: 326 bits (836), Expect = 2.860e-102 Identity = 197/418 (47.13%), Postives = 247/418 (59.09%), Query Frame = 2 Query: 329 RRVALCALPEVCSRHNSPAQPHAIADCARSISGSGSVAVVMCL-DHPSYAFAAGCAVARAFPLYSSTSRKRPGAGAASVPAPPPSRTVQVYLRVPVEAWGAVRADLSAAAEGIQLAARLVDTPPNVLSTTAFVEEALAVA---------RGLPPSMCAVKVIRGDELEAQGFGGLYGVGKAAVEPPALVVLSYLPDGAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSVCFVGKGIIYDTGGLSIKTKTGMPGMKRDMGGAAAILGAFQAAVMAQVAXXXXXXXXXXXXXXXGRRPLHALLCLAENSVAANATRPDDIHTLYSGRTVEINNTDAEGRLVLSDGVAYAARHLGPSVIIDMATLTGAQGVTTGRRHASVLSNDEALEKMAVECGRSSGDLVHPVVYCPEFFSEEF 1552 RRV L LP SRHNSP +P I RS++ + V C+ + P + FA GCAVARAFP + G +V R + V + A A + L I+ +A LVD P N+L+TT V A +V RG P+ A++VI GDEL+ +GFGG++GVGKAA PPAL +LSY P G +G + VGKGI+YDTGGLSIKTKTGMPGMK+DMGGA+ ILGAF+AAV A V ++PL+ LLCLAEN+V ATRPDDIHT YSG TVEINNTDAEGRLVL+DGVA+AA+HL P ++I+M TLTGAQG+ TG++HA++ NDE +E+ + GRSSGDL H V YCPEF+ EF Sbjct: 100 RRVVLVVLPSARSRHNSPCRPDGILSALRSLASATDDVHVHCVAEQPEHVFAMGCAVARAFPAWH---------GRDAVAEKLRGRRISVSFSEELSASAA--STLLETMRAIRFSAMLVDMPCNILNTTEMVRFAGSVVDSLKKSLAHRGEDPAKVALEVIEGDELQRRGFGGIFGVGKAATHPPALAILSYFPPGTTSGDA-----------------------------ATILVGKGIVYDTGGLSIKTKTGMPGMKKDMGGASGILGAFRAAVAAGVP----------------QKPLYCLLCLAENAVGPLATRPDDIHTFYSGLTVEINNTDAEGRLVLADGVAFAAKHLNPHIVINMCTLTGAQGIATGQKHAAIYCNDEDVEEQTLRAGRSSGDLAHAVPYCPEFYRGEF 461 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1012.131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1012.131.1 >prot_E-siliculosus-1a_F_contig1012.131.1 ID=prot_E-siliculosus-1a_F_contig1012.131.1|Name=mRNA_E-siliculosus-1a_F_contig1012.131.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=499bp MPISFHHVDELSSPPSNLICIDRKSVLASTTVSFASEHPGQAAFLRDIVSback to top mRNA from alignment at E-siliculosus-1a_F_contig1012:114..5993- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1012.131.1 ID=mRNA_E-siliculosus-1a_F_contig1012.131.1|Name=mRNA_E-siliculosus-1a_F_contig1012.131.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5880bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1012:114..5993- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1012:114..5993- >mRNA_E-siliculosus-1a_F_contig1012.131.1 ID=mRNA_E-siliculosus-1a_F_contig1012.131.1|Name=mRNA_E-siliculosus-1a_F_contig1012.131.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2994bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1012:114..5993- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |