mRNA_E-siliculosus-1a_F_contig10087.113.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: D7FJY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY3_ECTSI) HSP 1 Score: 215 bits (548), Expect = 3.100e-69 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLETMQETME 327
PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQA+LAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLE+RQHFAMKEDPRLRELDFGNFQDLETMQETME
Sbjct: 17 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQATLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEQRQHFAMKEDPRLRELDFGNFQDLETMQETME 125
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: A0A6H5KR22_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR22_9PHAE) HSP 1 Score: 204 bits (520), Expect = 2.870e-62 Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLETMQETME 327
PFRIILMRHAESEGNVDKC+YSSTPDHALKITERGKRQA+ AGRELQKLIGDESVYFIVSPYTRTRMTY IVKEGL KRQHFAMKEDPRLRELDFGNFQD TMQETME
Sbjct: 68 PFRIILMRHAESEGNVDKCMYSSTPDHALKITERGKRQATFAGRELQKLIGDESVYFIVSPYTRTRMTYNIVKEGLGKRQHFAMKEDPRLRELDFGNFQDSGTMQETME 176
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: UPI00054BF4F1 (histidine phosphatase family protein n=1 Tax=Streptacidiphilus albus TaxID=105425 RepID=UPI00054BF4F1) HSP 1 Score: 112 bits (280), Expect = 8.070e-29 Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLE 306
P RI+L+RH ESEGNVD+ +Y PDHALK+T RG++QA AG EL++L+GD +V VSPY RTR T+ ++ GL+ R + E+PRLRE D+GN QD+E
Sbjct: 4 PLRIVLVRHGESEGNVDESIYERVPDHALKLTGRGRKQALAAGAELRELLGDGAVQAYVSPYLRTRQTFDLM--GLD-RNRLRVMEEPRLREQDWGNLQDVE 102
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: UPI0018ACB664 (histidine phosphatase family protein n=1 Tax=Streptacidiphilus fuscans TaxID=2789292 RepID=UPI0018ACB664) HSP 1 Score: 109 bits (273), Expect = 9.100e-28 Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLETMQE 318
P RI+L+RH ESEGNVD+ +Y PDHALK+TERG+ QA AG EL+++ G E V VSPYTR R T ++ GLE + M E+PRLRE D+GN QDL+ ++E
Sbjct: 4 PRRIVLLRHGESEGNVDESIYERVPDHALKLTERGREQAREAGAELREMFGVERVQVYVSPYTRARQTLGLL--GLEPARIRVM-EEPRLREQDWGNLQDLDDIRE 106
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: A0A239C9K5_9ACTN (Broad specificity phosphatase PhoE n=2 Tax=Streptomyces TaxID=1883 RepID=A0A239C9K5_9ACTN) HSP 1 Score: 108 bits (269), Expect = 4.730e-27 Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLETMQ 315
P RI+L+RH ES+GN D +Y PDHAL +T+RG QA AGREL++L G+E V VSPY RT T+ ++ GLE + A KE+PRLRE D+GN+QD E +Q
Sbjct: 4 PRRIVLIRHGESQGNADDTIYERVPDHALTLTDRGVEQARAAGRELRELFGEERVQAFVSPYRRTHQTFHLL--GLEPSRTRA-KEEPRLREQDWGNYQDAEDVQ 105
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: D2VF75_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VF75_NAEGR) HSP 1 Score: 107 bits (267), Expect = 5.000e-27 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQD 300
P RI L+RH ESEGN++ +YS PD+ +++T +G +QA AG++L+++IGDESV FIVSPY R+ T++ + ++ +KEDPRLRE DFGNFQD
Sbjct: 1 PKRIFLIRHGESEGNINSHIYSIKPDNKIELTAKGIQQADEAGKKLKEIIGDESVIFIVSPYRRSVQTFEGIANHFGGMENVTVKEDPRLREQDFGNFQD 100
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: UPI0005620182 (histidine phosphatase family protein n=1 Tax=Streptacidiphilus rugosus TaxID=405783 RepID=UPI0005620182) HSP 1 Score: 107 bits (266), Expect = 1.020e-26 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLE 306
P RI+L+RH ESEGNVD+ +Y PDHAL +T RG+ QA AG EL+ + G E + VSPYTRTR T +++ GLE + M E+PRLRE D+GN QDLE
Sbjct: 4 PRRIVLIRHGESEGNVDESIYERVPDHALTLTARGREQARAAGAELRTMFGMERIQVYVSPYTRTRQTLELL--GLEPARVRVM-EEPRLREQDWGNLQDLE 102
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: UPI0015F7C0C2 (histidine phosphatase family protein n=1 Tax=Streptacidiphilus sp. P02-A3a TaxID=2704468 RepID=UPI0015F7C0C2) HSP 1 Score: 107 bits (266), Expect = 1.100e-26 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDLE 306
P RI+L+RH ESEGNVD+ +Y PDHAL++T RG++QA G EL+ ++GDE V VSPY RTR T+ ++ E+ + E+PRLRE D+GN QD+E
Sbjct: 4 PQRIVLVRHGESEGNVDETIYERVPDHALELTRRGRKQAVATGEELRAVLGDEPVQVYVSPYLRTRQTFDLLALDPER---LRVMEEPRLREQDWGNLQDVE 102
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: UPI001D03A26E (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D03A26E) HSP 1 Score: 109 bits (272), Expect = 2.110e-26 Identity = 51/100 (51.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQD 300
P RI L+RH ESEGN+D VY+ PD+ +++TE G +QA AG++L+++IGDESV F +SPY R+ T++++ + +++ KEDPRLRE DFGNFQD
Sbjct: 124 PKRIFLIRHGESEGNIDPNVYAVKPDNKIELTELGMQQADEAGKKLKQIIGDESVCFFISPYKRSVQTFEMIAKHFGGKENVYYKEDPRLREQDFGNFQD 223
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Match: C1MRD5_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MRD5_MICPC) HSP 1 Score: 108 bits (269), Expect = 2.870e-26 Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 1 PFRIILMRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIG-DESVYFIVSPYTRTRMTYKIVKEGLEKRQHFAMKEDPRLRELDFGNFQDL 303
P RIIL+RHAESEGNVD+ VY PDH +++TE+GK+QA AG +L+ ++G +ESVY VSPY RT T + + + + ++E+PR+RE DFGNFQD+
Sbjct: 22 PKRIILIRHAESEGNVDETVYQRKPDHRIELTEKGKQQARDAGEKLKAILGPNESVYAYVSPYMRTEQTLYEIGQAIGTHRVLGVREEPRMREQDFGNFQDV 123 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10087.113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10087.113.1 >prot_E-siliculosus-1a_F_contig10087.113.1 ID=prot_E-siliculosus-1a_F_contig10087.113.1|Name=mRNA_E-siliculosus-1a_F_contig10087.113.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=103bp MRHAESEGNVDKCVYSSTPDHALKITERGKRQASLAGRELQKLIGDESVYback to top mRNA from alignment at E-siliculosus-1a_F_contig10087:1060..2228+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10087.113.1 ID=mRNA_E-siliculosus-1a_F_contig10087.113.1|Name=mRNA_E-siliculosus-1a_F_contig10087.113.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1169bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10087:1060..2228+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10087:1060..2228+ >mRNA_E-siliculosus-1a_F_contig10087.113.1 ID=mRNA_E-siliculosus-1a_F_contig10087.113.1|Name=mRNA_E-siliculosus-1a_F_contig10087.113.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=618bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10087:1060..2228+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |