mRNA_E-siliculosus-1a_F_contig10065.103.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI) HSP 1 Score: 215 bits (548), Expect = 9.220e-63 Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 318
EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAG+SEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV
Sbjct: 2181 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGISEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 2286
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE) HSP 1 Score: 172 bits (437), Expect = 8.330e-48 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1 Query: 55 QVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 318
+VAMLLDMATVFLYPTPVDFTFLKDFYRFEVPAL GVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV
Sbjct: 1168 EVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALTGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEVV 1255
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: G4YH99_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YH99_PHYSP) HSP 1 Score: 106 bits (264), Expect = 1.800e-24 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL+IKC++ RA P V +LLDM +VFL+ TP DF+FL+ FYR EV V+ KR L R+FL LR+P + E KV + L+++PVLTT+ EDP+ NN +V
Sbjct: 2141 ESKLLIKCLITYSRAKPEDVQVLLDMVSVFLHRTPFDFSFLQTFYREEVATKYSVANKRNLIRLFLRMLREPGASEELKVHAVQLLIMPVLTTSFEDPNVNNIDV 2245
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A397ESV8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ESV8_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.230e-24 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 674 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 778
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A6A5AX95_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AX95_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.300e-24 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 842 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 946
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A418C387_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C387_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.340e-24 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2179 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2283
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A397DAI0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DAI0_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.350e-24 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2200 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2304
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A3R7BKN8_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BKN8_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.350e-24 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2205 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTTASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2309
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: A0A329SZM8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SZM8_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.580e-24 Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL+IKCM+ RA P V +LLDM +VFL+ TP DF+FL+ FYR EV A + KR L R+FL LR+P + + KV + L+++PVLTT+ EDP NN +V
Sbjct: 2145 ESKLLIKCMITYSRAKPEDVQVLLDMVSVFLHRTPFDFSFLQTFYREEVAAKYSAANKRNLVRLFLRMLREPGASEDLKVHAVQLLIMPVLTTSFEDPSVNNIDV 2249
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Match: W4G9L1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9L1_9STRA) HSP 1 Score: 104 bits (260), Expect = 6.250e-24 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 1 EGKLIIKCMMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKRALFRVFLETLRDPNLTGEHKVKCLSLVVIPVLTTTLEDPHTNNAEV 315
E KL++KC+++ RA+P V +LLDM TVFL+ T DF+FL+ FYR EV + KRA+ +FL LRD + + KV + L+++P+L T+ EDPHTNNA+V
Sbjct: 2202 ESKLLVKCLIQYCRANPDDVQVLLDMLTVFLHHTSFDFSFLRAFYRDEVACRYSTANKRAIIHLFLRMLRDTAASEDLKVHAIQLLIMPLLNTSFEDPHTNNADV 2306 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10065.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10065.103.1 >prot_E-siliculosus-1a_F_contig10065.103.1 ID=prot_E-siliculosus-1a_F_contig10065.103.1|Name=mRNA_E-siliculosus-1a_F_contig10065.103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=98bp MMECYRAHPGQVAMLLDMATVFLYPTPVDFTFLKDFYRFEVPALAGVSEKback to top mRNA from alignment at E-siliculosus-1a_F_contig10065:41..1048- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10065.103.1 ID=mRNA_E-siliculosus-1a_F_contig10065.103.1|Name=mRNA_E-siliculosus-1a_F_contig10065.103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1008bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10065:41..1048- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10065:41..1048- >mRNA_E-siliculosus-1a_F_contig10065.103.1 ID=mRNA_E-siliculosus-1a_F_contig10065.103.1|Name=mRNA_E-siliculosus-1a_F_contig10065.103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=588bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10065:41..1048- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |