mRNA_E-siliculosus-1a_F_contig10063.102.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: D7FJV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV6_ECTSI) HSP 1 Score: 170 bits (431), Expect = 6.140e-53 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 Query: 1 MWRPPQPTNRFDSAGRWRVKWTSTGQQVKAHTQEQSGTTFPRHRNLRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
MWRPPQPTNRFDSAGRWRVKWTSTGQQVKAHTQEQSGTTFPRHRNLRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ
Sbjct: 1 MWRPPQPTNRFDSAGRWRVKWTSTGQQVKAHTQEQSGTTFPRHRNLRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 83
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5KAW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW0_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 5.890e-6 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TKAHM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 39 LHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ 76
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5JV29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV29_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 9.020e-6 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TKAHM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 48 LHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ 85
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5K4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A1_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 1.400e-5 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TKAHM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 39 LHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ 76
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5K1Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Q8_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 2.270e-5 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TKAHM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 9 LHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ 46
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5L7R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7R4_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 2.740e-5 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TKAHM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 204 LHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ 241
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5KEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ3_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 2.780e-5 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TKAHM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 244 LHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQ 281
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Match: A0A6H5KZ86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ86_9PHAE) HSP 1 Score: 48.9 bits (115), Expect = 3.240e-5 Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 1 Query: 136 LRDMVLRVTKAHMASTRQDLSERQLLEEDRLHEDFVAQ 249
L ++ R TK HM STR+DLSE QL+ EDRLHEDF+AQ
Sbjct: 80 LHRVMWRYTKTHMQSTREDLSEGQLVGEDRLHEDFLAQ 117 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10063.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 8 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10063.102.1 >prot_E-siliculosus-1a_F_contig10063.102.1 ID=prot_E-siliculosus-1a_F_contig10063.102.1|Name=mRNA_E-siliculosus-1a_F_contig10063.102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=83bp MWRPPQPTNRFDSAGRWRVKWTSTGQQVKAHTQEQSGTTFPRHRNLRDMVback to top mRNA from alignment at E-siliculosus-1a_F_contig10063:498..2563- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10063.102.1 ID=mRNA_E-siliculosus-1a_F_contig10063.102.1|Name=mRNA_E-siliculosus-1a_F_contig10063.102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2066bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10063:498..2563- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10063:498..2563- >mRNA_E-siliculosus-1a_F_contig10063.102.1 ID=mRNA_E-siliculosus-1a_F_contig10063.102.1|Name=mRNA_E-siliculosus-1a_F_contig10063.102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=498bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10063:498..2563- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |