mRNA_E-siliculosus-1a_F_contig1006.100.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: D7G026_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G026_ECTSI) HSP 1 Score: 2289 bits (5932), Expect = 0.000e+0 Identity = 1160/1234 (94.00%), Postives = 1183/1234 (95.87%), Query Frame = 1 Query: 1 MYRENGGTMQITNAVEQAKKLDDRSAITFGEKLDQVCDFDVIAMAEKDSCSIAMVMKEKYVSAAKRELKNQDPKSAPTDLECLQHILKEKLHGSTVADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNGDGNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAGHELRGGRRTASLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFE-ELGRLCRYQTFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIRMARMDQHMRGSMAKAKIDDLHDYSRYRP-EGHYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIVASSGDVVSWLLPHWRTLSNMRPLSDIYGSLFAGKYTAGDANSRAYLVVQSCKRDGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQRLEAPFDAEGQAIGTQASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLTKLKVSYGAALSIRTADLAKTGGRLDGVIARWEADQDNFXXXXXXXXXXPCEIGDDFVAKQPPKAWNKGNASQESKHPFQYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEALPKPLDDLDVGPRTHFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKEEAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQPVXXXXXXXXPTSPPARRPLLTSCPEFQHDDIDLDELQRMYEKGSNCVTDLNRLDGLLKYLSEHVLHPIPIKEVCYPTGDRGVVTIDGGSFEIEPAAPVPGSPQLALEPGHDSRSIVIMLLGGIRNESFGVLKLIIRDKHISKWLQEQTEHGWGVKVKATIVQPKGAWAGDGLLVLAFSSSIDQPEEEVRCLVVPGAIIRFVPKEPQASPPGTCMV 3696 MYRENG TMQITNAVEQAKKLDDRSA TFGEKLDQVCDFDV+AMAEKDSCSIAMVMKEKYV AAKRELKNQDPKSAPTDLECLQ+ILKEKLHGS VADSTSDE SWFNETDRLLQGIVSSEPG+GDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEI DGSPDMRPLFSVVSDNGDGNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAGH+LRGGRRTASLSYADLLN+PMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFE ELGRLCRYQ FMPIDGGEITECSHVQAIALGKKAF RKRVLKVSSPSSKFLGVANTWWELDEILSD+AQ H KVRVEESAFRLPTMLITTRVMDIV NAINEHRKTN PISKCIRMARMDQHMRGSMAKAKI DLHDY RYRP EGHYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIVASSGD VSWLLPHWRTLSNMR LSD+YGSLFAGKYTAG ANSRAYLVVQSCKRDGWVTNFQEFLRNVLVHKVQGETI SE GR+RIAGLEQ LEAPFDAEGQAIGT+ASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSL KLKVSYGAALSIRTADLA+TGGRLDGVIARWEADQDN XXXXXXXXXXPCE+GDDFVAKQPPKAWNKGN S+ESKHPFQYRADS LQGLAVSTPHSFKGGI+ELLRSKETTRWIFTPSFNRFLPGPRQALLDRS+ALPKPLD LDVGPRTHFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGI F+WMLDDNVQLCHELDVGKEEAKYQPCSFTQVMNSLERLM AE KKGIRVSTASDKEG+TRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQPVXXXXXXXXPTSPPARRPLL SCPEFQHDDIDLDELQR YEKGSNCVTDLN LDGLLKYLSEHVL PIPI+EVCYPTGD GVVTIDG SFEIEPAAPVPG+PQLALEPGH+SRSIVIMLLGGIRNESFGVLKLIIRDKHI KWLQEQTEHGWGVKVKATIVQPKGA AGDGLLVLAFSSSID+PEEE +V A +R + ASPPGTCMV Sbjct: 1 MYRENGRTMQITNAVEQAKKLDDRSATTFGEKLDQVCDFDVVAMAEKDSCSIAMVMKEKYVLAAKRELKNQDPKSAPTDLECLQYILKEKLHGSIVADSTSDEVSWFNETDRLLQGIVSSEPGRGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIHDGSPDMRPLFSVVSDNGDGNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAGHDLRGGRRTASLSYADLLNVPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFEQELGRLCRYQAFMPIDGGEITECSHVQAIALGKKAFHRKRVLKVSSPSSKFLGVANTWWELDEILSDRAQGHPKVRVEESAFRLPTMLITTRVMDIVHNAINEHRKTNTPISKCIRMARMDQHMRGSMAKAKIGDLHDYCRYRPDEGHYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIVASSGDAVSWLLPHWRTLSNMRTLSDMYGSLFAGKYTAGVANSRAYLVVQSCKRDGWVTNFQEFLRNVLVHKVQGETIKSEEGRRRIAGLEQSLEAPFDAEGQAIGTEASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLAKLKVSYGAALSIRTADLAETGGRLDGVIARWEADQDNSXXXXXXXXXXPCELGDDFVAKQPPKAWNKGNGSKESKHPFQYRADSALQGLAVSTPHSFKGGIKELLRSKETTRWIFTPSFNRFLPGPRQALLDRSQALPKPLDGLDVGPRTHFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIPFIWMLDDNVQLCHELDVGKEEAKYQPCSFTQVMNSLERLMFAEEKKGIRVSTASDKEGTTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQPVXXXXXXXXPTSPPARRPLLVSCPEFQHDDIDLDELQRKYEKGSNCVTDLNHLDGLLKYLSEHVLQPIPIEEVCYPTGDLGVVTIDGRSFEIEPAAPVPGNPQLALEPGHNSRSIVIMLLGGIRNESFGVLKLIIRDKHIGKWLQEQTEHGWGVKVKATIVQPKGARAGDGLLVLAFSSSIDEPEEEEHFSMVGTASVRM--DQASASPPGTCMV 1232
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A6H5KZJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ2_9PHAE) HSP 1 Score: 1207 bits (3123), Expect = 0.000e+0 Identity = 654/956 (68.41%), Postives = 690/956 (72.18%), Query Frame = 1 Query: 151 SIAMVMKEKYVSAAKRELKNQDPKSAPTDLECLQHILKEKLHGSTVADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNGDGNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAGHELRGGRRTASLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFE-ELGRLCRYQTFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIRMARMDQHMRGSMAKAKIDDLHDYSRYRPEGHYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIVASSGDVVSWLLPHWRTLSNMRPLSDIYGSLFAGKYTAGDANSRAYLVVQSCKRDGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQRLEAPFDAEGQAIGTQASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLTKLKVSYGAALSIRTADLAKTGGRLDGVIARWEADQDNFXXXXXXXXXXPCEIGDDFVAKQPPKAWNKGNASQESKHPFQYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEALPKPLDDLDVGPR---------------------------THFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKEEAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGA 2934 ++ +++ KYV AAKRELK+QDPKSAPTDLECLQ IL+EKLHGSTVADSTSDE SWFNETDRLL GIVSSEPG GDGHGQMVVMRVYEKEEQRSMQHCL QAM+KLEI DGS DMRPLFSVVSDNG + QAGH+ RG RRTASLSYADLLN+PMILILCDKGRTGDTFPHSL CFDLRIRTAEQSF+TFE ELGRLCRYQTFMPIDGGE TECSH AFRRKRVLK H VRVEESAFRLPTMLITTRVM IV NA+NEHRKTN PISK DKT TRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPI ASSGDVVSWLLPHWR LSN RPLS++YGSLFAGKYTAG ANSRAYLVVQSCKRD WVTNFQEFLRNVL HKVQGETI +EAGR+RIAGLE RLEAPFDAE +AIGT+ASYASLKAAIDW GRFHTNHGVQLC +++ + L + G KG A+++SKHPFQYRADS LQGLAVSTPHS KGGI+ELLRSKETTRW+FTPSFNRFLPGPRQALLDRSEALPKPL LDVGPR THFGDHYV MELPMSMPSDESPSSRCSP+EGGIGYTRHFI+RWSQAN + F WMLDDNVQLCHELDVGKE+AK QPCSFTQVMNSLERL LAE K GIRVSTASDKEGSTRDVLEYVKV+GVR EACPRESDLL GDTPKQPRAV QKITTVGDLCG PGH+GVLGIARHGYGCTNNKEV+E FGVTHSVYSF LLNVASTVSKGA Sbjct: 6 TLDLIVLSKYVLAAKRELKHQDPKSAPTDLECLQCILQEKLHGSTVADSTSDEVSWFNETDRLLPGIVSSEPGTGDGHGQMVVMRVYEKEEQRSMQHCLHQAMKKLEIHDGSADMRPLFSVVSDNG------------------------------------WKRQAGHDRRGSRRTASLSYADLLNVPMILILCDKGRTGDTFPHSLDCFDLRIRTAEQSFSTFEQELGRLCRYQTFMPIDGGETTECSH---------AFRRKRVLKA---------------------------HPNVRVEESAFRLPTMLITTRVMGIVHNAVNEHRKTNTPISK---------------------------------------DKTGTRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIFASSGDVVSWLLPHWRMLSNTRPLSEMYGSLFAGKYTAGVANSRAYLVVQSCKRDRWVTNFQEFLRNVLAHKVQGETIKNEAGRRRIAGLEPRLEAPFDAEARAIGTEASYASLKAAIDWVGRFHTNHGVQLCE-----------------------MTLWRSSLRRPG--------------------------------------------TKGMAARKSKHPFQYRADSALQGLAVSTPHSLKGGIKELLRSKETTRWVFTPSFNRFLPGPRQALLDRSEALPKPLGGLDVGPRQEHDRDVMVWVNRAHNRCSRSMFKSSWTHFGDHYVTMELPMSMPSDESPSSRCSPKEGGIGYTRHFIRRWSQANELPFAWMLDDNVQLCHELDVGKEQAKCQPCSFTQVMNSLERLKLAEDKNGIRVSTASDKEGSTRDVLEYVKVDGVRGEACPRESDLLGGDTPKQPRAVGQKITTVGDLCGHPGHFGVLGIARHGYGCTNNKEVRESFGVTHSVYSFYLLNVASTVSKGA 783
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: D7FUQ0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ0_ECTSI) HSP 1 Score: 902 bits (2330), Expect = 1.650e-302 Identity = 561/1242 (45.17%), Postives = 717/1242 (57.73%), Query Frame = 1 Query: 82 TFGEKLDQVCDFDVIAMAEKDSCSIAMVM---KEKYVSAAKRELKNQDPKSAPTDLECLQHILKEKLHGSTVADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNGDGNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAGHELRGGRRTASLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFE-ELGRLCRYQTFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIRMARMDQHMRGSMAKAKIDD------LHDYSRYRP-EGHYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIVASSG---DVVSWLLPHWRTLSNMRPLSDIYGSLFAGKYTAGDANSRAYLVVQSC-KRDGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQR-LEAPFDAEGQAIGTQASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLTKLKVSYGAALSIRTADLAKTGGRLDGVIARWEADQDNFXXXXXXXXXXPCEIGDDFVAKQPPKAWNKGNASQES-----KHPFQYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEALPKPLDDLDVGPR-----------------THFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKEEAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQPVXXXXXXXXPTSPPARRPLLTSCPEFQHDDIDLDELQRMYEK---GSNCVTDLNRLDGLLKYLSEHVLHPIPIKEVCYPTGDRGVVTIDGGSFEIEPAAPVPGSPQLALEPGHDSRSIVIMLLGGIRNESFGVLKLIIRDK------------------------HISKWLQEQTEHGWGVKVKATIVQPKGAWAGDGLLVLAFSSSIDQPEEE 3612 +F +L +VC F+V + C I V+ K+ YVSAA+ ELK+ + D CL++IL+EKL S VA++TS E+SWFNETDR+L+ ++ + +G HG+MVVMRVYE+EEQ SMQHCLRQA +L + DG P RPLFSVV DNGD T+LS IE YF ++FN+ + G T L +R+ EL+ +L G R T SLSY DLLN+PMILILC+KGR GDTFPHSLGCFDLR+R A F++FE ELGRLCRY F I+GG + S A++LG + RKR++KVS+P+ L VA+TWW L+ I++ + +EES F LPT L+ + M + A+ EHR TN PISKCIRMA+MD HM GS K + LH+YS YRP E H+D R + ++ RRL+LSAECQ+GKTG YL YL L A + + P P G + +SWLLPHWRTL + P+S+ Y +L A KYT G R +LV QSC + + W + L + GE + S G + I L QR L PF+ EG A + SLK AI+WDGRF GVQ C C QCT A +YG L+++ ADL + GG V RW QD F AKQPP W G A +HP + + T L VS P + G+ K +RWIFTPS+NR GPRQA+LDRS AL + D DVG R HFG YV++ +P MP ES CS EEGGIGY RHFIQ+WS I FVWMLDDNVQ+CHELDV + +Y PC FT VM+SLER+++ I V+TA + V + CP + + LRG T +TTV CG+P HYGVLGI+RHG G N K PFGV HSVYSFCLLNV STV + A+YPMKR+WED+EFNHI+DEKGLVVC FRKFSHSKKNLQP P + PLL F+H DI LD L+ YEK GS V + L+ LLKYLS HVL I + + YP+ R V+ +D FE+ P P GSP++ L+ +S+ +IMLLGG++N+S G+LK ++ DK HI +WLQE + V+V + IV+PKG G GLLVL+FSS+ + E+ Sbjct: 241 SFDTRLGRVCRFNVGTKGDPCFCDIHSVVDFVKQAYVSAAREELKD----NPHDDRSCLRYILREKLKASAVAENTSAEYSWFNETDRVLRDLLRGDSDRG--HGRMVVMRVYEREEQLSMQHCLRQARRELLLHDG-PTERPLFSVVCDNGD--TNLSQDIEEYFRDSFNVQDDAGGVST--LGNRMVELR---KLPGSRNT-SLSYEDLLNVPMILILCEKGRMGDTFPHSLGCFDLRLRVAGY-FSSFEQELGRLCRYPAFRKINGG--SGPSREDAMSLGCEVLDRKRLVKVSTPAG-ILSVADTWWLLESIIASIGADDV-ITLEESVFPLPTALVPSHTMGKLLKAVEEHRLTNTPISKCIRMAKMDLHMIGSTNIKKKPNTETENALHNYSAYRPAEKHFDHRRGLSERKDPRRLILSAECQIGKTGVYLDYLSKLTNATTASCSEIVPCPPPVEDGWPREELSWLLPHWRTLIGIAPMSNEYSTLLASKYTEGIVRERIHLVRQSCCEGNRWRDEYAALLVDSC-----GEHVRSVIGNQYIEALRQRELVPPFNTEGDPTPAPACFESLKEAINWDGRFEPGLGVQFCACESQCTCAMAGD------AYGKGLTLQLADLTRAGGEHGRVDERWNMPQDGDEGPAAKDAHVR-----KFAAKQPPCNWANGEAQGNLSTCTFRHPREPESGHTFS-LHVSIPTE-EIGVIFFNPKKTASRWIFTPSYNRAASGPRQAVLDRSVALQQGCDPPDVGTRFHINVLVVRWEQFALYRRHFGHQYVVLAMPGRMPCFESEGGYCSAEEGGIGYARHFIQQWSSTRDIPFVWMLDDNVQMCHELDV--DTGEYNPCGFTHVMDSLERILMLPDSTNIVVNTAQ----------QSVSKHAASRTTCPPDLESLRGQTVP---GRTMHLTTVAGFCGKPDHYGVLGISRHGLGGENTKPTTTPFGVNHSVYSFCLLNVRSTVKQRAYYPMKRYWEDVEFNHIVDEKGLVVCMFRKFSHSKKNLQP------------PHLQGPLLCPPFAFEHGDIGLDVLEETYEKVRRGSTMVIPTDYLNSLLKYLSCHVLGSIYAEAIAYPSDRRRVILVDT-PFEVLPTVPEQGSPRIELQTVPNSQVFLIMLLGGVKNQSLGLLKHVLTDKLVKQQLKEVVVVTRLPQRDGSTGNHIGEWLQEFNDPESVVEVGSKIVKPKGGRLGHGLLVLSFSSTSEHRRED 1416
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A836CLD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD4_9STRA) HSP 1 Score: 349 bits (896), Expect = 5.300e-99 Identity = 313/981 (31.91%), Postives = 445/981 (45.36%), Query Frame = 1 Query: 391 MVVMRVYEKEEQRSMQHCLRQAMEKLEIRDG---SPDMRPLFSVVSDNGDGNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAG--HELRGGRRTAS--LSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFEELGRLCRYQTFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSD--KAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAP----------------ISKCIRM-ARMD----QHMRGSMAKAKIDDLHDYSRYRP-EGHYDSGRDKTS--TRNERRLVLSAECQVGKTGAYLHYLKILK-RAASPIATPPPPFPIVASSGDVVS-WLLPHWRTLSNMRPLSDIYGSLFAGKYTAGDANSRAY----LVVQSCKR-DGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQ---RLEAPFDAEGQAIGTQASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLTKLKVSYGAALSIRTADLAKTGGRLDGVIARWEADQDNFXXXXXXXXXXPCEIGDDFVAKQPPKAWNKGNASQESKHPF-----QYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEA-----LPKP----------------LDDLDVGPRTHFGDHYVIMELPMSMPSD----------------ESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDV----GKE-EAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDE---ACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQPV 3054 M ++RVYE E R++Q LR A+ +L G S FSV++D T + IE YF + FN+ + G TL LE Q +RTA L Y DL N+P I+I+C+K R GDTFP + FDLR+RT+ + +ELGRLCRY GE VQ L + F+ R + +++ + +G+ +T WE IL K++Q +V +LP LI+ ++ V A++ T A I++ +RM +D QH R ++A + LH+Y +R HYD R +S R+ RL+LSAECQ+GKTGAYL Y+++L+ R S P +AS+ V WLLP W +L LS Y L GKYT A R LVV+ W+ + E+L + QGE I + G+ I+ L R DA G + Q L +DWDGR G +G A + +L GA A G L E QD+ ++P ++ + HPF RA + + P +++L+ RW+FTPS+NR PGPRQALLDR A LP P + D + HFG Y ++ +P SMP++ + + GG GY+R FIQ + A G+ VW++DDN+Q C E+D+ GK + + Q SF VM+ LE L+ ++ +A+ G+T DV E ACP +LR V +TTV L G G YG++G R +++ PF VTHSVYSF LLN+ +TV +GA++P+K EDIEFN ++DEKGLV CK R+F H+KKNLQP+ Sbjct: 1 MKLVRVYEDGENRALQAGLRHAVCELGFGLGGGASCSEYRAFSVIADTKS--TEIRRDIEEYFRDRFNVSSDSGEGGCRTLHQLLENRQQSIIEGATPNQRTAQAELCYGDLENVPCIIIVCNKARMGDTFPDIMSTFDLRLRTSGVLSSFIQELGRLCRYPKL-----GE-----RVQGADLAAQ-FKEARSVVLTAQGGRIVGMVDTDWERQRILGTIPKSEQE-RVTYTLLQHKLPYALISVKIFSCVSAAVSARETTVAREPEQQWGTSPARERFLIAEFLRMPGGLDVYTAQHTRKTLA---VRQLHEYQNFRATSSHYDHNRHSSSGCARDPLRLMLSAECQIGKTGAYLRYIQLLRDRLESNSRGITLPIVDIASTLAVPQMWLLPSWESLQKFPALSTSYSRLCIGKYTMDVATRRLAHLKRLVVEHTDAGSAWLDAYTEWLLSA-----QGECIVTRVGQAMISTLRNSDIRCPLVVDAAGCSDIRQGHQQDLVKVLDWDGRLDQEDGGSYWPGNG----AAASEVLRLSSYIGALFRKVNA-----GNML-------EVLQDHAWCAQPE--------------QRPVQSGTQPGVEALKMHPFAAVARSIRAVTAAPTTEMGAPLPVSDSNDDVLKQPVCARWVFTPSYNRATPGPRQALLDRRAAYGPAGLPPPPHGGVSKLLVQVLVVRREQFDAYVK-HFGSTYFVIGMPSSMPAEVCDFINSMSAFTLYDSNTDTEALQAATGGPGYSRLFIQLLAYAAGLRHVWLMDDNIQYCSEIDLFSLAGKPGQRQLQSTSFQHVMDELELLLTGAGSTTVQTPSAA---GATTDVAISALAQKASPEVTKACPPPPYMLRPGPAPARHDVCGPVTTVEQLSGYHGQYGIIGFQRD---TKQMRKLTTPFAVTHSVYSFFLLNIEATVKRGAFFPVKTHAEDIEFNFLLDEKGLVACKSRRFFHTKKNLQPL 922
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A2R5GW98_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW98_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.880e-74 Identity = 305/1082 (28.19%), Postives = 450/1082 (41.59%), Query Frame = 1 Query: 250 QHILKEKLHGST-----VADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNGDGNTSLSTCIEPYFLN--------NFNLLNAGAGEGTYTLKDRL---------EELQAGHELRGGRRTA-------SLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATF-EELGRLCRYQ--------TFMPIDGGEITECSHVQAIALGKKAFRRKRVLK-----VSSPSSKFLGVANTWWELD-------EILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAP----ISKCI-------------RMARMDQHMRGSMAKAK--IDDLHDYSRYRPEG--------HYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILK-RAASPIATPPPPFPIVASSGDVVSWLLPHWRTL--SNMRPLSDIYGSLFAGKYTAGDANSRAY-LVVQSCKRDGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQRLE----APFDAEGQAIGTQASYASLK-AAIDWDGRFHTNHGVQLCVCSGQC-TPACQDSLTKLKVSYGAALS--IRTA------DLAKTGGRLDGVIARWEADQDNFXXXXXXXXXXPC----EIGDDFVAKQPPKAW--------NKG---NASQESKHPFQYRADST----------LQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEALP-----------------KPLDDLDVGPRTHFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKE------EAKYQPCSFTQVMNSLERLM------LAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQ 3048 Q+++ EKL + + +TS SW+NETDRLL ++ P G L +E DG VV TSL T +EP+ L + + AG T+ DR+ +E +A L R + + Y DL NLP I+ILC+KGR GDTFPHS D+R+R++ ++++TF +E GR+CRY TF + E Q + R+ K V P ++ A++ +L E D + + V+ LPT+L+ + EH+ +A I +CI R A + ++ + K I+ +H YR HYDSG + + RRL+L A+CQ GKTG YLH+L++LK R I TPP P+V + W LPHWR L S PLS Y L +Y R L++ S R GW + ++L + GE + +AG+ ++ L Q+L APF+ G++ + + L +++DGRF + G L Q T +D L K G +L +R A L G R + D F I +F K K + +G +A H +AD+ L + + G ++ + T RW+F PS+NR AL+D +A+P K DD +G ++I+ LP SM S S SR + + GGIGY R FIQ + G+ +VW+LDDNV +C+E + ++ A+ C+F+ VM +ER++ L EA + R+ E+ K LLRG P A + +T +L G YG++GI R C E K PF VT+SVYSF LNV STV+ G ++P+K F ED+EFNH++DE GLV K +F H KKNL+ Sbjct: 25 QYVISEKLERNREDRTDLQGNTSQ--SWYNETDRLLHDLLDIHPNTYHGG--------------------LFSVVEDFGGSDGKKKRTSGGKVVQKVARRATSLFTQLEPWTLTRDLRHPSKHDDAKQDDAGTKPETIVDRVNKSFAEAQAQEAEARKHLGESSRPSPTKAVQKTAKYEDLENLPTIVILCEKGRVGDTFPHSFRFLDIRLRSS-RTYSTFVQEFGRVCRYPGLDSNRAVTFQVSEEEEGWTALEQQLEQFFQDPEVRRYFAKGGSYAVLDPGNEVRFHADSELQLKSGFRTALENADDGRARFGRWTVKRYVHVLPTVLMNAERYNAQLQRAIEHKYRDAEGRQRIDQCIPGPLDLYLSSGPRRAAAASRPRVETIEEEKVVINPMHGIDAYRSRNAQMRGQIIHYDSGH--SGVVDPRRLLLMAQCQQGKTGTYLHFLRLLKERVELAIPTPPDALPLVPRA----EWTLPHWRNLIVSAQPPLSKFYNRLQTSQYDTSILQQRTLVLMLASESRSGWKEAYLDYLLDE-----DGEAVQCKAGKDKVKELRQKLAQEHTAPFN------GSRCTNSRLAFVCVNFDGRFSSKEGDDLAKSFLQNDTAQLRDILDKHAKETGTSLGHRVRVAREHVQRQLWDAGSRRGSMDQPQHGGADRFTKSMKAANAYESVAARSISPEFDGKYHRKQYVVKDVKLVGEGVCLSAPYAGFHDLNLKADARNVQINVGKRKLLNVKLPAKEHDMGTVD----NATTARWVFVPSYNRA----GVALVDYEKAIPEDESGKPTVVCIVVRSGKQFDDYVAA----YGSAHIILSLPESMASKSSEGSRVNADRGGIGYARLFIQLAAHQLGLPWVWILDDNVDVCYERKLEEKVPADALSARPNACTFSTVMTGVERIVHNGDEKLTEAHQQKRMKK-----------WEHEKPM------------LLRGSP--APEASSENASTKKELTGGSDQYGLIGIRRDPRACPT--ESKHPFMVTYSVYSFIYLNVTSTVNAGVFFPVKTFGEDVEFNHLVDEAGLVCLKVNRFFHHKKNLK 1027
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A2R5H028_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H028_9STRA) HSP 1 Score: 273 bits (697), Expect = 7.240e-71 Identity = 314/1109 (28.31%), Postives = 456/1109 (41.12%), Query Frame = 1 Query: 250 QHILKEKLHGS----TVADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNG--DGN----------------TSLSTCIEPYFLNNF----NLLNAGAGEGTYTLKDRL---------EELQAGHELRGGRRTA-------SLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATF-EELGRLCRYQ--------TFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIR--------MARMDQHMRG----------------SMAKAKIDD---------LHDYSRYRPEG--------HYDSGRDKTSTRNE--------------RRLVLSAECQVGKTGAYLHYLKILK-RAASPIATPPPPFPIVASSGDVVSWLLPHWRTL--SNMRP----LSDIYGSLFAGKYTAGDANSRAY-LVVQSCKRDGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQRLE---APFDAEGQAIGTQASYASLKA-AIDWDGRFHTNHGVQLCVC---SGQCTPACQDSLTKLKVSYGAALSIRTA-----------DLAKTGGRLD---------------------GVIARWEADQDNFXXXXXXXXXXPCEIGDDFVAKQPPKAWNKGNASQESKHPFQYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEALP-----------------KPLDDLDVGPRTHFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKE------EAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQ 3048 Q+++ EKL + T + + + SW+NETDRLL ++ +P G M V+RVYE +E S+Q CLR A++KL + S D L SVV+D G DG TSL T +EP+ L + EG T+ DR+ +E +A L R++ + Y DL NLP I+ILC+KGR GDTFPHS D+R+R+++ +++TF +E GR+CRY TF+ + T H Q K R+ K S + G + E+ + Q + ++ R T R + ++ + + NA + K I R+DQ + G S + +I++ +H YR HYDS R RRL+L A+CQ GKTG YLH+L++LK R I TPP P+V + W LPHWR L S P L Y G+Y A R L++ S GW + +L GE I S AG +I L + +E APFD G++ + + L +++DGRF + G L S T +D L K + G +L R D GR+D V AR ++ D+ V P A G +E + + L +P S L + RW+F PS+NR AL+D +A+P K DD +G ++I+ LP SM S SR E GGIGY R F+Q + G+ +VW+LDDNV +C+E + + A C+F+ VM +E ++ E ++ E + LE K +G +LR P ++ T +L YG++GI R E + PF VT+SVYSF LNV STV+ ++P+K FWED+EFNH++DE GLV K +F H KKNL+ Sbjct: 858 QYVVSEKLERNREDRTESQGNTSQ-SWYNETDRLLHDLLDVDPKYRTGR--MAVVRVYETDENLSIQDCLRSALKKLGLT--SHDHGGLLSVVADVGGSDGKKRTSEGQEVQKVARRATSLFTQLEPWALTRDLRHPSKQKEAETEGE-TIVDRVNKSFAEAQAQEAEARKHLGEASRSSPSKAVQKTAKYEDLENLPTIVILCEKGRMGDTFPHSFRFLDIRLRSSK-TYSTFVQEFGRVCRYPGLDDSSAVTFVLSEEKGWTALEH-QLEQFFKDPEVRRYFAKGGSYAVLDPGGEVRFHADSELQLKSSFQKAWDKRDDGRARFGTWT-AKRYVHVLPTVLMNAERYNAQLQKAIEHKYRDAEGRQRIDQCIPGPLDLYLSSGPRRAAAESRPRVEINEKGEQKVKNPMHGIEAYRLRSAQTSRQATHYDSERSDXXXXXXXXXXXXXXXXXXXPRRLLLMAQCQQGKTGTYLHFLRLLKERVEIAIPTPPDALPLVPRA----EWTLPHWRNLIVSAQSPGFPALRSSYAMPKKGQYHASVLQQRTLALMLASENGSGWYEAYCGYLFGE-----DGEAIVSRAGLDKIEVLSRTVEELGAPFD------GSRCTNSQLALDCVNFDGRFSSAEGDALAKSFLESKHNTAQLRDILDKHAKNSGTSLGHRVRIAREHVQRQLWDAGSRRGRMDQPKDGGADSFTQSETAANAYESVAARSTLSGFTDKHHRKQYMVKDVKLVDEGVCLSVPYAGFHGLNLEEDGRNMRIKVGE--HKLLNVSPSSETRHTMRTLDDATSVRWVFVPSYNRA----GVALVDYEKAIPRDDRGKPTIVCIVVRSGKQFDDYVAA----YGSAHIILSLPASMASKTLEGSRVFAERGGIGYARLFVQLAAHQLGLPWVWILDDNVDVCYERKLADKVPANALSAHPDACTFSTVMIGVESIVHNEDEELA--------EAHNQKRLEKWKPDGP----------VLRKRP--APELSNENARTKEELTAGADQYGLIGIRRDPR--ARQTESEHPFMVTYSVYSFIYLNVTSTVNAEVFFPVKTFWEDVEFNHLVDEAGLVCLKVNRFFHHKKNLK 1910
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A2R5GR40_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR40_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.530e-69 Identity = 311/1124 (27.67%), Postives = 467/1124 (41.55%), Query Frame = 1 Query: 250 QHILKEKLHGSTVADSTSDEFS----WFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNG--DGN--------------TSLSTCIEPYFLN------NFNLLNAGAGEGTYTLKDRLE----ELQAGHELRGGRRTA-------SLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATF-EELGRLCRY--------QTFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWEL----DEILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIR--------MARMDQHMRGSM-------------------------AKAKIDDLHDYSRYRPEG------------------HYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILK-RAASPIATPPPPFPIVASSGDVVSWLLPHWRTLS-NMRPLS-----DIYGSLFAGKYTAGDANSRAYLVVQSCKR-DGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQ---RLEAPFDAEGQA---------IGTQASYASLKAAID--WDGR------FHTNHGVQLCVCSGQCTPACQDSLTKLKVSYGAALSIRTADLAKTGGRLDGV--IARWEADQDNFXXXXXXXXXXPC--EIGDDFVAKQPPKAWNKGNASQESKHPFQYRADSTLQGLAV------------------------------STPHSFKGGIEELLRSK-----ETTRWIFTPSFNRFLPGPRQALLDRSEALPKPLDDLDVGPRT-----------------HFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHE------LDVGKEEAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQ 3048 + +L EK+ G+ + D + + W+NETDRLL ++ P G M V+RVYE +E S+Q CLR A+ KL + D L SVV+D G DG TSL T IE + L+ + N A E TLKDR+ E +A L ++ A + Y DL NLP I+ILC+KGR GDTFPHS D+R+R++ +++TF +E GR+CRY + G E T+ + F R+ +K V + E+ D +++ T + S+ M R + ++ + + A + K + + R+DQ + G + + I+ LHD+ YR + HYD +D ++ RRL+L A+CQ GKTG YLH++K+LK I PP P P VA + SW LP+WR L RPL + Y G+Y R L+ + ++ + W+ ++ +LV E I S+AG++ + LE+ + EAP + + S + K + WDGR F L GQ A + +Y + R D G + I+R ++ F I +F K K N ++ S QGL+V S E LR + RW+F PS+NR ALL+ +A+P+P + + G RT ++G ++++ LP MPS + + E+GGIGY R FIQ + G+ +VW+LDDNV +C+E + +A PC+F VM +E ++ E ++ I++ T +K+ R K +R P S L + + G+L G G YG++GI R K+ K PF VT+SVYSF LLNV STV G ++P+K FWED+EFNH++DE GLV K +F H KKNL+ Sbjct: 893 EFVLSEKMAGN-LEDLNEQQGNLSQAWYNETDRLLHDLLDVHPKYRTGR--MAVIRVYETDENLSIQDCLRSALIKLGLTHN--DHGGLLSVVADVGGSDGKKGNTNEQQRPGRRATSLFTQIESWVLDRDLRHPSKQKSNPDAHE---TLKDRVNRSFAEAKAREMLEAQKKQAKPRNVQRTAKYEDLENLPTIVILCEKGRMGDTFPHSFRFLDIRLRSSP-TYSTFVQEFGRVCRYPGLDDSKVKGITIKKGPESTDGVEKSELRSQLDLFFRESDVKDYFAKGGSFAVLDPGNEVRFHADSEFQFRSRLETALCPSSSSRARFGMWKAKRYVHVLPTVLMNAERFGAQLQKAVEHKYRDVHGLQRIDQCIPGPLDLYVSSDRSRSTKNAHPKLIRVENGSTKVINPLHDHGAYRAQQPQSGANERSSKSSKSRQPHYDWAQD--GEKDPRRLLLVAQCQQGKTGTYLHFIKLLKDHIEVAIPAPPKPLPPVARA----SWSLPYWRNLIIGSRPLGFPSMRNDYDKPKTGQYHEAVMRQRLLLLALAGEQGESWL---DFYIMKLLVEDC--EAIQSKAGKEVLKHLEKFIGKKEAPITTDHTDTELAFRCVNFDDRFSNSEWKTSFQEIWDGREAKAMLFSALRKSSL----GQSQDASVSQRLRAAQAY---VQNRLWDAGARGRDRKALNSISRENMERVTFSTPQQRAYSRVAAKSISRNFDEKYCQKQHEVHNIELVAEGVSLSAPYSGFQGLSVFADADSVQVYLDAKSKRVPLFDVSHVPKPASKXXXXXXXXXETLRMSAREEAKDVRWVFVPSYNRA----GVALLNYEKAIPEPDEKNNQGKRTVVCIVVRSGQQFKDYVANYGSAHLVLGLPPKMPSKMDRTKFVTAEQGGIGYARLFIQLAASELGLPWVWILDDNVDVCYERRLMDDVPSNPPKAPPDPCTFVTVMTGVEHIVQNE-EETIQL-TGDEKQMQVR----RSKRPSIRRRPAPEVSTL--------------PVRSKGELTGGAGQYGLIGIRRDAQ--ARLKDPKAPFLVTYSVYSFILLNVDSTVRAGVYFPVKTFWEDVEFNHLVDEAGLVCLKVNRFYHHKKNLK 1963
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A2R5GIV1_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIV1_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.360e-68 Identity = 312/1148 (27.18%), Postives = 472/1148 (41.11%), Query Frame = 1 Query: 250 QHILKEKLHGST---VADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNGD-----------------GNTSLSTCIEPYFLNN---FNLLNAGAGEGTYTLKDRL----------EELQA---GHELRGGRRTASLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATF-EELGRLCRYQTFMPIDGG----EITECSH------VQAIALG------------KKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSDKAQQHTKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIR--------MARMDQHMRGSM----------------AKAKIDD---------LHD---YSRYRP---------------------EG--------HYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILKRAAS---PIATPPPPFPIVASSGDVVSWLLPHWRTL--SNMRPLSDIYGSLFAGKYTAGDANSRAYLVVQSCKR-DGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQR--LEAPFDAEGQAIGTQASYASLK-AAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLTKLKVS-YGAALSIRTADLAKTGGRLDGV---------IARWEADQDNFXXXXXXXXXXPCEIGDDF---------------------VAKQP--PKAWNKGNASQESKHPFQYRAD--------STLQGLAV---------------STPHSFKGGIEELLRS------KETTRWIFTPSFNRFLPGPRQALLDRSEALPKPLDDLD------VGPRTHFGDH-------YVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKEEAKYQ-------PCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQ 3048 Q+I+ EKL + + + +W+NETDRLL ++ +P G M V+RVYE +E S+Q CLR A++KLE+ D + SV++D G G TSL IE + L L E + TL DR+ EEL+A GHE + ++ A Y DL NLP I+ILC+KGR GDTFPHS D+R+R+++ +++TF +E GR+CRY + ++ + +H V+ AL K+ F + V P + A++ +L L Q + +S F + T R + ++ + + N + K I M R+DQ + G + A ++D LHD Y R+RP EG HYDS ++ RRL+L A+CQ GKTG YLH++++LK P+A PPP P+ W LP+W L S L Y G+Y R ++ +C++ W+ N++ +LR GE I SEAG +I L+ + PF+ ++ S + A +++DGRF SG+ + L VS +AL+ L+G+ + +A + P ++G VA +P P+ N NA Q + + S GLAV S+P + ++ R+ + RW F PS+NR ALLD A+PK D L V F D+ ++++ LP MPS + P + GGIG+ R FIQ + + +VW+LDDNV +C+E + + Q PC+F VM +E ++ +++ + R PR L+RG P A + T G +YG++GI R E + PF +++SVYSF LNV STV KG ++P+K FWED+EFNH++DE GLV K +F H KKNL+ Sbjct: 2966 QYIVSEKLERNMEDHADEQGNTSQTWYNETDRLLHDLLDVDPQYHTGR--MAVVRVYETDENLSIQDCLRSALKKLELTDAKHG--GVLSVIADVGGNDAKRRSRSGRREEASRGATSLLNQIEDWTLTRDLRHPSLQRDKPEDSETLVDRVNTSFAEAKAREELEAAEKGHEPKSVQKEAK--YEDLENLPAIVILCEKGRMGDTFPHSFRFLDIRLRSSK-TYSTFVQEFGRVCRYPGLDADESSIARFKVMKTAHDDGTDNVEWTALEEDLASFFANNDVKRFFAKGGSYAVLDPGKQVRFHADSEHQLRSGLLRALQLTPEDAGVQSRFGIWT---AKRYVHVLPTVLMNKDRFNNQVQKAIEHKYRGTWGMRRIDQCIPGQLDNYIAGPGRGRRRPPVPSASLNDQGEIDVTNPLHDLFAYRRHRPIAPTRRARQGAGAAEGKEAGDEGILVAGRNLHYDSS--FNGGQDPRRLLLMAQCQQGKTGTYLHFIRLLKDVIELDVPMA-PPPMVPVPRKL-----WTLPYWGNLVVSKFPQLRVQYDKPNKGQYHPTVMQQRILALMLACEQGQRWLKNYKNYLR-----AEDGEAIQSEAGLAKIRKLDPNPAFDKPFE------NSRCSRPDIAIACVNFDGRF-----------SGEWEDKVAEQLQDENVSKLSSALAENNTQPTPP---LEGISVMQRFVQHLRAAKAFVQSMLWDAGARGQHPIQVGVRVRSHPMLVTRSKHTQMHTAYAPVAARPVTPQFDNVYNAKQHVMTDLSFIGEGACLSVPYSGFCGLAVRADVNGAEVFMSADDSSPETSLLNVDTTTRTVRKSHGTHSVRWAFIPSYNRA----GVALLDYDRAIPKDGDSLRTVVCIVVRSGKQFDDYVAAYGSAHLVLGLPSKMPSKKRPGEFVFADRGGIGFARLFIQLAASQLKLNWVWILDDNVDVCYERTLVDDSVPLQTLRQGPAPCTFATVMKGVEAIVQKRSEQ----------------------FHSRRMHEWPRA--LVRGK-PAPRAAATARATNTDQFIGGAENYGLIGIRRDAQ--ARQTESEHPFMISYSVYSFIYLNVKSTVKKGVFFPVKTFWEDVEFNHLVDEAGLVCLKVNRFFHHKKNLK 4039
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: R1D1D9_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D1D9_EMIHU) HSP 1 Score: 256 bits (653), Expect = 1.890e-65 Identity = 296/1127 (26.26%), Postives = 454/1127 (40.28%), Query Frame = 1 Query: 172 EKYVSAAKRELK--------NQDPKSAP--------TDLECLQHILKEKLHGSTVADSTSDEFSWFNETDRLLQGIVS-SEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIR-DGSPDMRPLFSVVSDNGD---GNTSLSTCIEPYFLNNFNLLNAGAGEGTYTLKDRLEELQAGHELRGGRRT----ASLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATFEELGRLCRYQTFMPI------------------------------DGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLG-------------VANTWWELDEILSDKAQQH---------TKVRVEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISK------CIRMAR-MDQHMR---GSMAKAKIDD--------LHDY-SRYRPE-GHYDSGRDKTSTRNE---------RRLVLSAECQVGKTGAYLHYLKILKRAASPIATPPPPFPIVASSGDVVSWLLPHWRTLSNMRPLSDIYGSLFAGKYTAGDANSRAYLVVQSCKRDG------WVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQRL--------EAPFDAEGQAI-GTQASYASLKAAIDWDGRF---HTNHGVQLCVCSGQCTPACQDSLTKLKVSYGAALSIRTADLAKTGG--RLDGVIARWEADQDNFXXXXXXXXXXP-----CEIGDDFVAKQPPKAWNKGNASQESKHPFQYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSF----------NR---FLPGPRQALLDRSEALPKPLDDLDVGPRTHF----GDHYVIMELPMSMP---SDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHELDVGKEEA----------KYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQ------PRAVDQK-ITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDIEFNHIIDEKGLVVCKFRKFSHSKKNLQ 3048 EK ++ AK+E++ +D +SAP T+ E L++I K+KL G A +++DE SWF ETDR + ++ + +G GQM++MRVYE +E +MQ LR A+EKL + G D+R FSV+SD + G+ C P G TL+D L A ++ + A LSYADL N+PM+LI+ +K R GDTFPHSL DLR+RTA A +ELGR+CRY + DG E ++A+ + A +R+L++ P L + EL ++L + ++ T + RLP ++ V ++ I+ +++ AP S+ C++M +D +MR G ++ + D LHDY Y P G D+G K + +RL+L AECQ+GKTGAYLH+L L + P F SW P+W + R Y G Y A R + + W + ++L + GE I S+ G + L +L + P D +A+ + + +++ +DWDGR H + PA K GAA I ++ GG R + + D E+ + F + W K +++ + GLAV RW+FT S+ NR P R+ + P+ D + G Y+I E+P +M + ++P + E G IGY R Q + G+ +WMLDDNV+ C +D+ + K + C F VM +E L+ K + +T + + R ++ PR + G P P AVD + ++ G YG+LG+ R N + F THSVYSF LLNV +T+ KG YP K WED+EF H++DE GL +CKF ++ H K++L+ Sbjct: 956 EKELARAKKEIEALREGGAEEEDNESAPPQPVTEDVTEDEALRYIFKQKLDGERKAKTSTDEESWFTETDRNVLALLDQTRNARGCLWGQMILMRVYENQENLTMQTVLRDALEKLGLAAPGGSDVRA-FSVLSDIAETIWGDRDGEVCKLP------------EGSPPLTLQDILNRKLASYQRESAQGVRAPRAELSYADLHNVPMLLIVTEKARMGDTFPHSLVSLDLRLRTAGTLVAFTQELGRMCRYPATRLLHGATKPLSVSGVLAALGAADARSAAEMEMDDGAETLVADDIEAV---RAAAEARRLLELELPMMVVLAGGTDQDIVAHVHSLPELCAELRKLLDPQLRKQDDPLNGSVVTHFDLHCYFDRLPRAIVRQDVQKLLVAGIDA-KQSKAPHSREITALQCVKMKEGLDMYMRPIKGKLSNKAMHDRITEGANPLHDYHDNYEPTTGKVDTGEGKKPPHYDAVDEPQTHAKRLLLFAECQIGKTGAYLHFLTRLTEEVRG-SNLPSVFMSKKGIDQRWSWFFPYWENIGRQRLK---YEEPKEGHYYQAVAKGRMSKLQELAVAPPPAPLRTWADEYCDWLLSP-----SGECIVSKKGCAAVEELRVKLKLADGTAKQMPVDTATRAVRDDEGAREAVRLCVDWDGRMARLRQLHKDFSALRQPGLNPAAL-IWDKPPTHRGAARVIAKPNVVPAGGAVRAQHAAPQRKPGDDRSSDVVDVAVGAKRFGGGAELLEPFTCRLHVPGWMKNRLWTDAQR-------VNIAGLAV--------------------RWMFTCSYGGAQKVTVRLNRDCAMAPLKREQYVQVLMLRPRDASPADRAAFDEYLRCWGSMYIIAEMPSTMQVRYAHDAPPLQLQVEVGRIGYARLVCQLLANELGLDEIWMLDDNVERCWAIDIDPDSVAPRTGVDGVVKLRECGFATVMQGMELLLDRGDKDNVDEQLPLVSAAATEHITFDAETE--RGKSPPRRALANSGSAPLVIRGGGGPAAVDPAPLGSLRQYSGDKLAYGILGMQRDDP--RNRLRQRRGFLATHSVYSFFLLNVRATLDKGVLYPAKAIWEDVEFLHMVDEAGLAICKFSRYIHKKRHLR 2024
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Match: A0A2R5GLZ2_9STRA (GREB1-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLZ2_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.300e-56 Identity = 284/1031 (27.55%), Postives = 416/1031 (40.35%), Query Frame = 1 Query: 250 QHILKEKLHGS-----TVADSTSDEFSWFNETDRLLQGIVSSEPGKGDGHGQMVVMRVYEKEEQRSMQHCLRQAMEKLEIRDGSPDMRPLFSVVSDNG--DGN-----------------TSLSTCIEPYFLNNFNLLNAG----AGEGTYTLKDRL---------EELQAGHELRGGRRTA-------SLSYADLLNLPMILILCDKGRTGDTFPHSLGCFDLRIRTAEQSFATF-EELGRLCRYQ--------TFMPIDGGEITECSHVQAIALGKKAFRRKRVLKVSSPSSKFLGVANTWWELDEILSDKAQQHTKVR-VEESAFRLPTMLITTRVMDIVDNAINEHRKTNAPISKCIR--------MARMDQHMRGSM------------------------AKAKIDDLHDYSRYRPEG--------HYDSGRDKTSTRNERRLVLSAECQVGKTGAYLHYLKILK-RAASPIATPPPPFPIVASSGDVVSWLLPHWRTL--SNMRP----LSDIYGSLFAGKYTAGDANSRAYLVVQSCKRDGWVTNFQEFLRNVLVHKVQGETINSEAGRKRIAGLEQRLEAPFDAEGQAIGTQASYASLKAAIDWDGRFHTNHGVQLCVCSGQCTPACQDSLTKLKVS-YGAALSIRTADLAKTGGRLDGVIARWEADQDNFXXXXXXXXXXPCEIGDDFVAKQPPKAWNKGNASQESKHPFQYRADSTLQGLAVSTPHSFKGGIEELLRSKETTRWIFTPSFNRFLPGPRQALLDRSEALP-----------------KPLDDLDVGPRTHFGDHYVIMELPMSMPSDESPSSRCSPEEGGIGYTRHFIQRWSQANGIAFVWMLDDNVQLCHE------LDVGKEEAKYQPCSFTQVMNSLERLMLAEAKKGIRVSTASDKEGSTRDVLEYVKVNGVRDEACPRESDLLRGDTPKQPRAVDQKITTVGDLCGRPGHYGVLGIARHGYGCTNNKEVKEPFGVTHSVYSFCLLNVASTVSKGAWYPMKRFWEDI 2967 Q+++ EKL + + +TS SW+NETDRLL ++ P G M V+RVYE +E S+Q CLR A++KL + S D L SVV+D G DG TSL T +E + L +L + A T+ DR+ ++ +A L R++ + Y DL NLP I+ILC+KGR GDTFPHS D+R+R+++ +++TF +E GR+CRY TF + E Q K R+ K S + G + D L K+ T +R V++ R R + ++ + + NA + K I R+DQ + G + K I+ +HD YR HYDSG + + RRL+L A+CQ GKTG YLH+L++LK R I +PP P+V + W LPHWR L S+ P L Y G+Y H VQ + ++ R + LE F QA S A+ + + G++H V +T +K++ G LS A + DG + + Q K N +S++ T++ L +T + RW+F PS+NR AL+D +A+P K DD +G ++I+ LP SM S S SR E GGIGY R FIQ + G+ +VW+LDDNV +C+E + V A+ C+F+ VM +E ++ E ++ ++ A ++ LE K NG +LR P A Q T +L G YG++GI R E + PF VT+SVYSF LNV STV+ G ++P+K FWEDI Sbjct: 759 QYVISEKLERNREDRTNLQGNTSQ--SWYNETDRLLHDLLDVHPKYRTGR--MAVIRVYETDENLSIQDCLRSALKKLGLT--SHDHGGLLSVVADVGGSDGKKKRTSEGKVVQKVARRATSLFTQLETWTLTR-DLRHPSKQDVAATERETIVDRVNKSFAEAQAQDAEARKHLGEAPRSSPSKAVQKTAKYEDLENLPTIVILCEKGRMGDTFPHSFRFLDIRLRSSK-TYSTFVQEFGRVCRYPGLDSSSAVTFEVSEEEEGWTALEQQLERFFKDPEVRRYFAKGGSYAVMDPG-NEVRFHADSDLQLKSGFRTALRNVDDGRARFGRWT-AKRYVHVLPTVLMNAERYNAQLQKAIEHKYHDAEGRQRIDQCIPGPLDLYLSSGPRRAAVASRPRVETIEEEKVVINPMHDIDAYRSRSAQTSRQIIHYDSGH--SGGEDPRRLLLMAQCQQGKTGTYLHFLRLLKERVELAIPSPPNALPLVPRA----EWTLPHWRNLIVSSQSPGFPALRSSYAMPKKGQY----------------------------------HHVQRQLWDAACRRGSMDQLEFGGADSFTRSMQAANAYESVAARSTSSSFTGKYHRKQYV----------------VTDVKLADEGVCLSAPYAGFHGLNLKADGRNMQIKVGQR--------------------------KLLNVSLSSEKR----------TMRTLDDAT----------------SVRWVFVPSYNRA----GVALVDYEKAIPRDDSGKPTVVCIVVRSGKQFDDYVAA----YGSAHLILGLPASMASKTSEGSRVFAERGGIGYARLFIQLAAHQLGLPWVWILDDNVDVCYERKLEEKVPVNALRARPDTCTFSTVMTGVESIVHNEDEE---LTQAHQQKR-----LEKWKPNGP----------VLRKKP--APEASHQNARTKEELTGGADQYGLIGIRRDPR--ARQTESEHPFMVTYSVYSFIYLNVTSTVNAGVFFPVKTFWEDI 1641 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1006.100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1006.100.1 >prot_E-siliculosus-1a_F_contig1006.100.1 ID=prot_E-siliculosus-1a_F_contig1006.100.1|Name=mRNA_E-siliculosus-1a_F_contig1006.100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1248bp MYRENGGTMQITNAVEQAKKLDDRSAITFGEKLDQVCDFDVIAMAEKDSCback to top mRNA from alignment at E-siliculosus-1a_F_contig1006:23053..29561+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1006.100.1 ID=mRNA_E-siliculosus-1a_F_contig1006.100.1|Name=mRNA_E-siliculosus-1a_F_contig1006.100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6509bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1006:23053..29561+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1006:23053..29561+ >mRNA_E-siliculosus-1a_F_contig1006.100.1 ID=mRNA_E-siliculosus-1a_F_contig1006.100.1|Name=mRNA_E-siliculosus-1a_F_contig1006.100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=7488bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1006:23053..29561+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |