mRNA_E-siliculosus-1a_F_contig10046.93.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A6H5KBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ8_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.940e-100 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 2 Query: 2 LHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 LHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFL GLGVDLDALEVDAQRVHKVARPDKR SYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE Sbjct: 387 LHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLNGLGVDLDALEVDAQRVHKVARPDKRASYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 535
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A4D9DCJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCJ4_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.380e-39 Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 2 LHTAQ---GEPVNCGPSAWLFVLRDQTLFATGKKTD-PPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 LH Q G+ V GP W+FVLRD ++A KKTD PPRFHHSSFF G V+AAG+ VA GVL+ LYPHSGHYRP++ HL LL FL+ VD+ ++VD Q V KVAR T R RK+D+P+M + + F AK AW FDE Sbjct: 230 LHQGQAGAGDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMAVMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDE 382
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: W7U6C7_9STRA (Calmodulin binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6C7_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.400e-37 Identity = 75/142 (52.82%), Postives = 92/142 (64.79%), Query Frame = 2 Query: 26 VNCGPSAWLFVLRDQTLFATGKKTD-PPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 V GP W+FVLRD ++A KKTD PPRFHHSSFF G V+AAG+ VA GVL+ LYPHSGHYRP++ HL LL FL+ VD+ ++VD Q V KVAR T R RK+D+P+M + + F AK AW FDE Sbjct: 365 VETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMALMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDE 506
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A8K1C508_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C508_PYTOL) HSP 1 Score: 137 bits (345), Expect = 1.120e-36 Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = 2 Query: 5 HTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDP-PRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 H A E V G W+FVLRD L+ + K+T PR HH+SF GG V+ AGM+V +G+++T+YPHSGHYRP+ L VLL+FL GVDL ++VD QR+ KV R S VRK+DN +A +L F E K+LAW FDE Sbjct: 109 HMASQEIVQSGEDGWIFVLRDGVLYGSQKETKKNPRIHHTSFVGGECVQTAGMMVINDGIIETIYPHSGHYRPSEHELLVLLRFLVAQGVDLTDVKVDVQRIQKVFRSSINGSL--VRKIDNAHFWNAYRVLYFLEQKHLAWKIGFFDE 255
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A484DTR1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTR1_BRELC) HSP 1 Score: 137 bits (345), Expect = 1.530e-36 Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 2 Query: 2 LHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDP-PRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 +H A + V+ GP W+FVLRDQ L+ + K+T PR HH+SF GG V+ AGM+V +GV+KT+YPHSGHYRP+ L VLL+FL GVDL + VD QR+ KV R + V+K+DN +A + + E+K+ AW FDE Sbjct: 127 VHVASQQIVDTGPDGWIFVLRDQVLYGSQKETKKIPRIHHTSFVGGECVQTAGMMVITDGVIKTIYPHSGHYRPSEYELLVLLRFLVNNGVDLSNVNVDVQRIQKVYRQSLNGTL--VKKLDNAHFWNAYRVWHYLESKHRAWKVGLFDE 274
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: H3GBS3_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GBS3_PHYRM) HSP 1 Score: 135 bits (341), Expect = 4.480e-36 Identity = 70/150 (46.67%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 2 LHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDP-PRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 +H E V GP W+FVLRD L+ + K+T PR HH+SF GG V+ AGM+V +G++KT+YPHSGHYRP+ L VLL+FL GVDL ++VD QR+ KV R + V+K+DN +A + F E K+LAW FDE Sbjct: 111 VHDVSQEIVETGPDGWIFVLRDGVLYGSQKETKKIPRIHHTSFVGGECVQTAGMMVIMDGIIKTIYPHSGHYRPSEYELLVLLRFLVNNGVDLSDVDVDVQRIQKVFRDTVNGAL--VKKLDNAHFWNAYRVWHFLEEKHLAWKIGLFDE 258
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: M4B446_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B446_HYAAE) HSP 1 Score: 132 bits (333), Expect = 5.690e-35 Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 2 Query: 20 EPVNCGPSAWLFVLRDQTLFATGKKTDP-PRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 E V GP W+FVLRD L+ K+T PR HH+SF GG V+ AGM+V GV+KT++PHSGHYRP+ L VLL+FL GVDL A++VD QR+ KV R + VRK+DN +A + F E K+LAW FDE Sbjct: 117 EIVETGPDGWIFVLRDGVLYGCQKETKKIPRIHHTSFVGGECVQTAGMMVITGGVIKTIFPHSGHYRPSEYELLVLLRFLVKNGVDLSAVDVDVQRIQKVYRESVNGTL--VRKLDNAHFWNAYRVWYFLEEKHLAWKIGLFDE 258
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A3M6VNP6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNP6_9STRA) HSP 1 Score: 132 bits (333), Expect = 9.710e-35 Identity = 68/150 (45.33%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 2 LHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDP-PRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 +H E V GP W+FVLRD L+ + K+T PR HH+SF GG V+ AGM+V G++KT+YPHSGHYRP+ L VLL+FL G+DL ++VD QR+ KV R + V+K+DN +A + F E K++AW FDE Sbjct: 127 VHEVSQEIVETGPDGWIFVLRDGVLYGSHKETKKIPRIHHTSFVGGECVQTAGMMVITNGIIKTIYPHSGHYRPSEYELLVLLRFLVNNGIDLSDVDVDVQRIQKVFRISVNGTL--VKKLDNAHFWNAYRVWYFLEEKHVAWKVGLFDE 274
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A1W0A215_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A215_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.210e-34 Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 2 Query: 2 LHTAQG-EPVNCGPSAWLFVLRDQTLFATGKKTDP-PRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 LH A E ++ G W+FVLRD L+ + K T PR HH+SF GG V+ AG++V E+GVLK +YPHSGHYRPT + VLL+FL G GV L+ +EVD QR KV+R +R + ++ K N A ++L+F + K AW+ FD+ Sbjct: 133 LHKASTPELIDTGEEGWIFVLRDGVLYGSAKVTKQVPRIHHTSFVGGECVQTAGIMVIEQGVLKVIYPHSGHYRPTESEVLVLLRFLLGRGVRLNDVEVDVQRFQKVSR--ERDNVSKISKKANAMFWPALHVLNFLQVKEKAWAGTLFDD 281
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Match: A0A1V9YJY3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJY3_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.590e-34 Identity = 72/151 (47.68%), Postives = 93/151 (61.59%), Query Frame = 2 Query: 2 LHTAQG-EPVNCGPSAWLFVLRDQTLFATGKKT-DPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLKGLGVDLDALEVDAQRVHKVARPDKRTSYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDE 448 LH A E ++ G W+FVLRD L+AT K T PR HH+SF GG V+ AG++V +GVL T+YPHSGHYRP+ + VLL+FL GV L + VD QR KV+R +RT +V KM+N + A +L F EAK AW FD+ Sbjct: 130 LHVASTQELIDTGDDGWIFVLRDGVLYATAKVTKQTPRIHHTSFVGGECVQTAGIIVVAQGVLTTIYPHSGHYRPSESEVLVLLRFLHQHGVRLQDVAVDVQRFQKVSR--ERTHVAKVSKMENAYFWPAPDVLLFLEAKEKAWGGTLFDD 278 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10046.93.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10046.93.1 >prot_E-siliculosus-1a_F_contig10046.93.1 ID=prot_E-siliculosus-1a_F_contig10046.93.1|Name=mRNA_E-siliculosus-1a_F_contig10046.93.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=150bp PAHRTGRAGKLRAERVAVRAARSNPLRHRQEDGPAKVPSFQLLRRGLRGGback to top mRNA from alignment at E-siliculosus-1a_F_contig10046:227..1939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10046.93.1 ID=mRNA_E-siliculosus-1a_F_contig10046.93.1|Name=mRNA_E-siliculosus-1a_F_contig10046.93.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1713bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10046:227..1939- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10046:227..1939- >mRNA_E-siliculosus-1a_F_contig10046.93.1 ID=mRNA_E-siliculosus-1a_F_contig10046.93.1|Name=mRNA_E-siliculosus-1a_F_contig10046.93.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=900bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10046:227..1939- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |