mRNA_E-siliculosus-1a_F_contig100.62.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig100.62.1 vs. uniprot
Match: D7FN40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN40_ECTSI) HSP 1 Score: 121 bits (304), Expect = 6.080e-35 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 1 Query: 1 MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLDMYVMFRASAVLVCACV 201
MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLDMYVMF AS VLVCACV
Sbjct: 1 MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLDMYVMFCASCVLVCACV 67
BLAST of mRNA_E-siliculosus-1a_F_contig100.62.1 vs. uniprot
Match: D7FN41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN41_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 2.360e-22 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 Query: 1 MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLD 153
MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLD
Sbjct: 90 MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLD 140
BLAST of mRNA_E-siliculosus-1a_F_contig100.62.1 vs. uniprot
Match: A0A6H5KMW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW4_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 5.790e-13 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 2 Query: 38 MRTETPRRSRKTQQRVARRSWRPGSSPLTTSSWSSSSLTCT 160
M+TETPRRS TQQRVARRSWRPGSSPLTTSSWSSSSLTCT
Sbjct: 1 MKTETPRRSPTTQQRVARRSWRPGSSPLTTSSWSSSSLTCT 41 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig100.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig100.62.1 >prot_E-siliculosus-1a_F_contig100.62.1 ID=prot_E-siliculosus-1a_F_contig100.62.1|Name=mRNA_E-siliculosus-1a_F_contig100.62.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=67bp MAEQTFDKKRRLDEDGNASAFAENTAESRKEKLETWLKPLDNEQLVKLLLback to top mRNA from alignment at E-siliculosus-1a_F_contig100:85732..85932+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig100.62.1 ID=mRNA_E-siliculosus-1a_F_contig100.62.1|Name=mRNA_E-siliculosus-1a_F_contig100.62.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=201bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig100:85732..85932+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig100:85732..85932+ >mRNA_E-siliculosus-1a_F_contig100.62.1 ID=mRNA_E-siliculosus-1a_F_contig100.62.1|Name=mRNA_E-siliculosus-1a_F_contig100.62.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=402bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig100:85732..85932+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |