mRNA_E-siliculosus-1a_F_contig100.59.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: D7FN45_ECTSI (Similarities to Heat shock protein 70-probable alternative splicing n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN45_ECTSI) HSP 1 Score: 856 bits (2211), Expect = 9.390e-311 Identity = 447/454 (98.46%), Postives = 450/454 (99.12%), Query Frame = 1 Query: 49 MSKITVVAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATIAH 1410 MSKITVVAAVVV GACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFL+NGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQT+EDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQ VIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPS+DGDSQDAHRFAGAEGERCKMW LSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATIAH Sbjct: 1 MSKITVVAAVVV-GACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLDNGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTKEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQ-VIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSEDGDSQDAHRFAGAEGERCKMWNSLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATIAH 452
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A7S3XQ15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ15_HETAK) HSP 1 Score: 419 bits (1078), Expect = 4.840e-139 Identity = 236/459 (51.42%), Postives = 305/459 (66.45%), Query Frame = 1 Query: 46 IMSKITVVAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQEDLSEAWFKIKRS-GHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPT---CALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKM--WKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 1404 +M + ++ A++V G CA LAA GF+GR +VVG+DLGTT+SVIG+N GG + I+P EG L+PS V+FL GRVAVG+ A + LE P +TIY AKRFIGR +D ++ +E AEH F+LV+ + SE WF++ + GH +V+P+ VG+ VL L A +LG+ QV KAVIAVPAKFDARQ+ T EA+R AGL+ V+R+LEEPTAAALA+GLHRKP+V+HILVYD GGGTLDVS+LFVN+GSVEV S+GDD+LGGSDFDQC+AH L +L +V +CG C H LYPLSE L+R L+D + V CM+ QR S G E + C W L +TR E+E +C+ LF+R + PVD +L + LT +DEVVMVGG TR PRVR+ L+ HLGV+ LN IDPD+ VAYGAAT+ Sbjct: 1 MMGALGIIVAILVVG-CAVLAAMGFKGRISVVGVDLGTTYSVIGINNGGTVEIVPDKEGHVLVPSTVAFLPEGRVAVGRAARRYLEHDPTHTIYNAKRFIGRAAADPSLVKELAEHDFELVERPGNASEGWFRLDEARGHGAAVAPEGVGARVLLHLKAMVADHLGYDQVDKAVIAVPAKFDARQRQMTAEAYRQAGLR-VMRVLEEPTAAALAYGLHRKPDVHHILVYDFGGGTLDVSVLFVNEGSVEVEASEGDDHLGGSDFDQCLAHHLVARLGPDLVDAGTFRRVEACGGAMAEAHLCTQHLLYPLSEELKRRLSDQLYSDVRCMV-----QRPGASS-----------------MRGGEADVCAPANWVETQLTVTRDEFEHACSDLFERAMIPVDLVLEEVGLTARGVDEVVMVGGTTRIPRVRARLKEHLGVESLNTHIDPDITVAYGAATV 435
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A835Z661_9STRA (Heat shock protein 70 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z661_9STRA) HSP 1 Score: 366 bits (940), Expect = 2.530e-118 Identity = 218/454 (48.02%), Postives = 285/454 (62.78%), Query Frame = 1 Query: 64 VVAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSA-VSEEAAEHQFQLVQT--QEDLSEAWFKIKR-SGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIV-ALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATIAH 1410 +V ++ CA LAA GF+GR TVVGIDLGTT+SV+GVNEGG + II +GS L+PS+VSFL +G VAVG A +L + A TIY AKR IGREF D + E F+LV+ ED S+AWF ++ + HP ++SPQ +G+ V+ ELL+ + LGH+QV AVIAVPAKFDARQ+ AT +AF+ AGL+ V+R+LEEPTAAALA+GL + +V+H+LVYD GGGTLDVSLL+V +GSV+V+ SDGDD LGG DFD+ +A +L KL A E +C F P CAL L +E +++ L+ E A C+ P A A G + C W+ + +TR E+E + A LF+R +A VDRL+ EI E VMVGG +R PRVR+ L+ L + LN IDPDV VAYGAAT+AH Sbjct: 3 IVLIALLVAVCAVLAANGFKGRVTVVGIDLGTTYSVVGVNEGGVVRIISAEDGSYLVPSMVSFLRSGEVAVGTAARQLAGNDTATTIYEAKRLIGREFPDEEDLLAEGTGRPFRLVRKPFSEDPSDAWFDLQSMTQHPAAISPQGIGTMVVRELLRMVHLDLGHTQVRAAVIAVPAKFDARQRRATAQAFQAAGLK-VVRVLEEPTAAALAYGLQNRDDVHHVLVYDFGGGTLDVSLLYVAEGSVQVITSDGDDALGGGDFDRAMASVLVAKLAAGGGGAPEGCAPRAACAFDAPACALSALRGEAERVKQELSTAEAATARCVRPAAAA---------------------AATLIGRCPKACAAWELTEVAVTREEFEAAAAPLFERALAAVDRLMEKSGHDAGEIQEAVMVGGTSRMPRVRADLQRRLRLSHLNTHIDPDVTVAYGAATVAH 434
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A6U1BP74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BP74_9STRA) HSP 1 Score: 337 bits (864), Expect = 7.760e-107 Identity = 199/458 (43.45%), Postives = 269/458 (58.73%), Query Frame = 1 Query: 37 GRDIMSKITVVAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQ--EDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 1404 G M + AV VA ACA +AA+GFRGR VGIDLGTT+SVI + ++ L+PS+V F G V VG DA L S P N I+ AKRFIGR F D AV E+ A H F++V E S+AWF + GH VSP+ VG HVL L A LGH Q+++AV++VPAKF+ RQ+ ATV+A++ AGL+ V+R+++EPTAAA+A+GL +K +V I+VYD GGGTLDVSLL VN+ S++++ + GDD LGG+DFDQC+ L RS L D S P C L P++E ++ L+D + A C + E C+ LS+E+TR+ +E++C LF R + PVD LL + +EIDEVV+VGG +R PR+R LL+ +GVD LN++IDPD+ VA GAA+I Sbjct: 22 GWPAMQWVLTAVAVAVA-ACAMMAASGFRGRPNTVGIDLGTTYSVIALRTLNATRVLKDEHQRSLIPSMVYFGPGGVVKVGYDAMAFLHSDPENVIFNAKRFIGRSFDDEAVQEQRAVHPFRVVNRSVPEVRSQAWFALSAQGHEDWVSPESVGKHVLQRLKDIAVFNLGHKQITRAVVSVPAKFNTRQRQATVDAYKAAGLK-VMRVIDEPTAAAVAYGLDKKSDVQWIIVYDFGGGTLDVSLLMVNEESIQMIATHGDDQLGGADFDQCLMEHL-----RSTSWLPHDADPCSPRDDVPACGDTELRPMAESIKCQLSDAQVATASC------------------------------GYRNRSDEDCR---ELSIEVTRSAFEEACDPLFQRVLRPVDLLLGESGMPAEEIDEVVLVGGTSRIPRIRELLKEKIGVDHLNMEIDPDITVAVGAASI 439
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A7S2H244_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H244_9STRA) HSP 1 Score: 327 bits (839), Expect = 3.630e-103 Identity = 196/456 (42.98%), Postives = 268/456 (58.77%), Query Frame = 1 Query: 70 AAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQE-DLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAV----------SCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 1404 AAV CA LA G++GR VVGIDLGTT+SVI + + ++ L+PS+V F G + VG A LE++P + IY AKR+IGR + AV E +H F +V + S WF + GH +VSP+ VGS+VL LL A LGH Q++KAV+AVPAKFD +Q+ AT+ A+ A L+ V+R++EEPTAAA+A+GL +KP+VN+ILVYD GGGTLDVSLLFVN SV+VL + GDD LGGSDFD C+ L+ ++ + + E+ +A S P CA + L+E ++ L+ T C P KG P QD+ R A PL L + R + Q C+ LFDR ++PV+ LL +++ E+DEVV+VGG +R PR+RSLL + G+D LN +IDPD+ VA GAA+I Sbjct: 7 AAVAFTAGCAILAVNGYKGRPDVVGIDLGTTYSVIALKTEYGVKVLRDEANRSLVPSMVHFGSGGAIHVGYAAESFLETEPNHVIYNAKRYIGRTYDAPAVQELEGKHGFAVVANKSVSPSGNWFSLDVPGHQSAVSPETVGSYVLRHLLDIAYFNLGHRQITKAVVAVPAKFDTQQRRATIAAYTQANLK-VVRIIEEPTAAAVAYGLDKKPDVNYILVYDFGGGTLDVSLLFVNKESVQVLHTHGDDELGGSDFDYCLTSWLDEQVSTAAGSQEKLHEACGEEGYIQTVDSTSDAPPLCAPSYIRQLAESMKCSLSVNATVHESC----------TAYFPGKGGP------QDSPRCA-----------PLQLTVERDSFHQRCSDLFDRVLSPVEALLKEINMDAAEVDEVVLVGGTSRIPRIRSLLSEYFGIDHLNTEIDPDLTVAIGAASI 434
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A1Z5JD96_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD96_FISSO) HSP 1 Score: 307 bits (787), Expect = 7.500e-95 Identity = 199/450 (44.22%), Postives = 260/450 (57.78%), Query Frame = 1 Query: 94 CAALAATGFRGRQTVVGIDLGTTFSVIGVNE----GGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQEDLSEAWFKIKRSGH-PPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVN-DGSVEVLGSDGDDNLGGSDFDQCVAHL-------LERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 1404 CA +A GFRGR +V GIDLGTT SVI V + GKI IP G+ ++PSVVSF+ + VG+ A +L+ES P +TIY AKR +GR F+D +V E +F L + +D S + H +++P VGS V+ LLQ YL H V AVI VPAKFDARQ+ ATV+AFR AG+ V R+LEEP AAALA+GLH K V+ ILVYD GGGTLDVSLL V+ DG V+V+GSDGDD LGG+DFD +AH + ++ R + +E A+ + C P C + + L E L+ L+ A + +AQ L D A C +P++LELT Y Q L DR VAP+ RLLH L +IDEVVMVGG TR P++R L++ L ++N IDPD+ VAYGAA++ Sbjct: 54 CAIMAKMGFRGRASVAGIDLGTTNSVICVQQLEKGVGKIECIPDEFGNVIVPSVVSFVSSKETIVGRAAKELIESHPLSTIYQAKRVLGRTFTDPSVQHFQNEVEFVLRENDDDGSVVFHVANHHHHIHQTITPIQVGSKVVKHLLQMTNRYLQHENVKSAVICVPAKFDARQRQATVQAFREAGVS-VQRILEEPAAAALAYGLHHKDGVDFILVYDFGGGTLDVSLLQVSGDGFVDVMGSDGDDQLGGADFDSAIAHYWLQQHPSVVERVHRHLPHMEYAD--LPCLQEYPLCTASSFHTLGEQLKIQLSSSSINATTSV----QAQCLGLEH-------------DVDNIA------CSSLRPITLELTPAVYAQIVQPLLDRSVAPIHRLLHDFQLQSQDIDEVVMVGGTTRMPQIRQLVQEALLQSKVNTHIDPDITVAYGAASV 477
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A7S0SSX6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSX6_9STRA) HSP 1 Score: 303 bits (776), Expect = 2.500e-94 Identity = 187/426 (43.90%), Postives = 259/426 (60.80%), Query Frame = 1 Query: 67 VAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQF---QLVQTQEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSC--GFT-TPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLL 1326 +AA V G CA LAA GFRGR T +G+DLGTTFSV+GVN GK+ II ++G + PSVV + NG + G DA L S P NTIY AKRFIG+ ++DS+V E ++H + +L Q + SE F + SG VSP+ VGS VL LL+ A +LGH+QV+KAVIAVPAKFD+ Q+ AT +A++ AGL+ V+R++EEPTAAA+A+ LH+K N+NHILVYD GGGTLDVSLLFV+ GSV+V +DGDD+LGGSDFD C+ LL K+ + D ++ G + C ++ +E +++ LT A C + D+Q K ++ ++ ++ +C LF RG+ PV RLL L +T ++IDEVV+VGG TR P+++ +L Sbjct: 10 LAAAFVVG-CAVLAALGFRGRVTTIGVDLGTTFSVVGVNINGKVHIINDSKGHLIFPSVVHYQSNGEILAGYDALPFLTSDPLNTIYNAKRFIGKNWNDSSVIEYGSKHAYTVDKLSHGQSNFSEVGFALS-SGL--IVSPEQVGSQVLKYLLKLTADFLGHNQVNKAVIAVPAKFDSIQRQATGDAYKRAGLK-VVRVIEEPTAAAVAYKLHKKSNINHILVYDFGGGTLDVSLLFVSKGSVQVYATDGDDSLGGSDFDMCLYDLLVNKVYSETGQQAHSADEITLPDGIQMSDVCVRSSIRHKAEEIKKKLTYANEAVFTCQLL---------------------DTQ----------------KTVTSTISVDDFTSTCDHLFQRGLLPVTRLLTELGMTKNDIDEVVLVGGTTRIPKIKQML 393
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A7S3NKF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKF0_9STRA) HSP 1 Score: 296 bits (759), Expect = 2.640e-91 Identity = 194/474 (40.93%), Postives = 270/474 (56.96%), Query Frame = 1 Query: 46 IMSKITVVAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGG----------------KIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIY---GAKRFIGREFSDSAVSEEAAEHQFQLVQTQEDLSEAWFKIKRS-GHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYE-QSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 1404 + S I ++ + CA L+A GFRGR VGIDLGTT+SVI V++ G +I G L PS+V+FLENG+ VG A LL+SQ + Y AKRFIGR F D++V+ +A E+ +Q++ + + A F+I + GH SV+P+ VG V+ LLQ A LGH+ ++ AVIAVPA F Q AT +AF+ AGL+ + R+L EP AAA+A+GL R+P+V H+LVYD GGGTLDVS+L+V DGSVEV+ + GD++LGGSDFD C+AH L L+++ +A+ + P CA H L +E + LTD E + PP R L K P+S + R+ +E Q C LF R ++ V L + +D+IDEVV+VGG +R P+VRS +++ L + RLN DIDPDV VA GAA++ Sbjct: 2 VNSSILILFGSALVAICAVLSALGFRGRVNTVGIDLGTTYSVIAVSDTGFMKRKKKKNAAERYMPSARVIYDENGEALTPSMVAFLENGKTEVGWSALNLLDSQATDARYVIRDAKRFIGRAFDDASVAPQAEEYSYQVIP---NGTCAAFQIDPTRGHGASVTPERVGELVVRRLLQSAQRDLGHTGITTAVIAVPAGFGPNQTRATADAFKAAGLK-IARILPEPVAAAVAYGLQRRPDVKHVLVYDFGGGTLDVSVLYVRDGSVEVVANHGDNDLGGSDFDHCIAHALATDLNKTEPITTDAQKQI------PPCAPHVLLRYAEDAKIALTDTE----RVVTPP----CRRLTDDK----------------------------PVSTTILRSYFESQLCGHLFQRAISVVHSTLKESMIRLDDIDEVVLVGGTSRIPKVRSDIKAALNIKRLNTDIDPDVTVAVGAASV 429
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: A0A7S4A5K1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5K1_9STRA) HSP 1 Score: 294 bits (753), Expect = 1.060e-90 Identity = 178/436 (40.83%), Postives = 260/436 (59.63%), Query Frame = 1 Query: 97 AALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 1404 A L+A GF+GR V+G+DLGTT+SV V+E G++ + L S V+FL++G V VG A + P N IY AKRFIGR++ D V+E+A ++ F +V+ +A F++ H +++P VG+ V+ LL+ LGH V +AVIAVPA F A Q AAT EAF+ AGL+ V R++ EP AAA+A+GLH+K NV+HILV+D GGGTLDVS+L+V GS+EV+ + GD++LGG+DFD C+A L ++++ ++ + + +D V TT C H L L+E ++ ++ +T +C KKG + L L LT+ +E++CA LF R + VD L + LT ++DEVV+VGG +R P +R LL +GV +LN++IDPDV VA GAA+I Sbjct: 18 AVLSALGFKGRVEVIGVDLGTTYSVAAVSEKGRVRVFEDPVRGKLTASTVAFLQDGGVLVGNAAKRHALKDPKNVIYDAKRFIGRKYDDPTVAEQAKKYAFAVVENT-TTHDAAFRV----HGRTIAPAEVGAEVVKALLKTVNEDLGHENVKRAVIAVPASFGAAQTAATGEAFKAAGLR-VARVMPEPVAAAVAYGLHKKENVHHILVFDFGGGTLDVSILYVQKGSIEVVANGGDNDLGGTDFDGCIADDLTKQVN-AVASSTDCDDFV----TTEPCEPHVLQQLAEEMKVQVSSVDTVQRKCAA-----------RTKKGC------------------------EELELTLTKQRFEKTCAHLFQRALKTVDDTLTNGMLTKKDVDEVVLVGGTSRVPHMRELLRKSIGVSKLNLEIDPDVTVAVGAASI 407
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Match: F0YCK5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCK5_AURAN) HSP 1 Score: 291 bits (745), Expect = 8.130e-90 Identity = 176/421 (41.81%), Postives = 239/421 (56.77%), Query Frame = 1 Query: 139 VGIDLGTTFSVIGVNEGGK-IAIIPGAEGSPLLPSVVSFLENGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTQEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSQDGDSQDAHRFAGAEGERCKMWKPLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAA 1398 VGIDLGTT+SV+ V+EG K + + + L S V+FL+ G VAVG A P + ++ AKRFIGR+F D +V+ +A ++ F++V+ A F + GHP + +P VG+ V+ L++ LGH V +AVIAVPA F Q AAT +AF+ AGL+ V R++ EP AAA+A+GLH+K +VNH+LVYD GGGTLDVS+L+V DGS+EV+ + GD++LGG+DFDQCVA L + A + A C P CA H L + E L+ ++D +A C+ P E C + TR +E++C LF R + V R L LT +IDEVVMVGG +R PRVR L HL VD+LN +IDPDV VA GAA Sbjct: 1 VGIDLGTTYSVVAVSEGRKGVRVFDDPDRGKLTASTVAFLKGGAVAVGAAAKAHAAKDPRHVLFDAKRFIGRDFDDESVALQAKKYTFEVVKDANSTGCA-FALDVPGHPAAATPVDVGAEVVKALMRTVHDDLGHENVKRAVIAVPASFGPAQIAATGDAFKAAGLK-VARVMPEPVAAAVAYGLHKKKDVNHVLVYDFGGGTLDVSILYVQDGSIEVVANGGDNDLGGTDFDQCVAEDLAADVAARTGAGDSVARAAGCEAREPLCARHVLASMGERLKIAVSDAASADAACLAPRES---------------------------------CDDLVRVEFAYTRKRFEKACDHLFVRAIDTVARTLDEGMLTHRDIDEVVMVGGTSRVPRVRDTLRDHLRVDKLNTEIDPDVTVAVGAA 386 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig100.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig100.59.1 >prot_E-siliculosus-1a_F_contig100.59.1 ID=prot_E-siliculosus-1a_F_contig100.59.1|Name=mRNA_E-siliculosus-1a_F_contig100.59.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=455bp MSKITVVAAVVVAGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIback to top mRNA from alignment at E-siliculosus-1a_F_contig100:57849..61561+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig100.59.1 ID=mRNA_E-siliculosus-1a_F_contig100.59.1|Name=mRNA_E-siliculosus-1a_F_contig100.59.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3713bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig100:57849..61561+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig100:57849..61561+ >mRNA_E-siliculosus-1a_F_contig100.59.1 ID=mRNA_E-siliculosus-1a_F_contig100.59.1|Name=mRNA_E-siliculosus-1a_F_contig100.59.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2730bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig100:57849..61561+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |