mRNA_E-siliculosus-1a_F_contig100.54.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: D7FN50_ECTSI (Death domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN50_ECTSI) HSP 1 Score: 1345 bits (3482), Expect = 0.000e+0 Identity = 683/712 (95.93%), Postives = 693/712 (97.33%), Query Frame = 2 Query: 551 MVTRLSKRCRELDKGGVINEGSGKEAGGGEFLGVPAGLGSSLKYCIKKNGLGKAAGEVARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTPARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPESGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLEPLARWSWRCRTPETSSSTDNDG-----DVNEGDTKAVWEGSRRRKRGRDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSAAGTLADRNEVARCLMSTREMFSDCQDARHLQWMRACREAGDVLSLLVGVLDDDGLEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKSVSDALGIPLFRAGDTVPRPPKKEDDKALAGLSGPRAILARRKPKVCHLLEVNGLARFVHSDAPVAPLDTAGMLVREDPIPGTNYDNGRLILAELGYTETESL 2671
MVTRLSKRCRELDKGGVINEGSGK+AGGGEFLGVPAGLGSSLKYCIKKNGLGKAA E+ARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHT ARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQP+SGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLEPL RWSWRCRTPETSS TDNDG DVNE DTKA EGS RRKRGRDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSA GTLADRNEVARCLMSTREMFSDC+DARHL WMRACREAGDVLSLLVGVLDDDGLEGE+LTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSG+VPGE MSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIR+EKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDE+LHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCV+FRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAK+VSDALGIPLFRAGDTVPRPPK EDDKALAGLSGPRAILARRKPKVCHLLEVNGLARFVHSDAPVAPLDTAGMLVREDPIPGTNYD GRLILAEL YTETESL
Sbjct: 1 MVTRLSKRCRELDKGGVINEGSGKKAGGGEFLGVPAGLGSSLKYCIKKNGLGKAASEIARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTAARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPKSGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLEPLTRWSWRCRTPETSS-TDNDGETGTGDVNEDDTKAGREGSGRRKRGRDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSATGTLADRNEVARCLMSTREMFSDCRDARHLSWMRACREAGDVLSLLVGVLDDDGLEGEDLTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSGRVPGEDMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRTEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDESLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVIFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKNVSDALGIPLFRAGDTVPRPPKMEDDKALAGLSGPRAILARRKPKVCHLLEVNGLARFVHSDAPVAPLDTAGMLVREDPIPGTNYDIGRLILAELCYTETESL 711
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A6H5LCB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCB0_9PHAE) HSP 1 Score: 633 bits (1632), Expect = 1.110e-208 Identity = 346/707 (48.94%), Postives = 451/707 (63.79%), Query Frame = 2 Query: 425 FTDSNWRNSCEYVLRVAISLASCVEPFAETPYLPLEHAEALSMVTRLSKRCRELDKGGVINEGSGKEAGGGEFLGVPAGLGSSLKYCIKKNGLGKAAGEVARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTPARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPESGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLEPLARWSWRCRTPETSSSTDNDGDVNEGDTKAVWEGSRRRK------------------------------------------RGRDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSAAGTLADRNEVARCLMSTREMFSDCQDARHLQWMRACREAGDVLSLLVGVLDDDGLEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDK--IRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKSVSDALGIPLFRAGDTV 2413
F D W NS EY+ + + LASCV PF+E PYLPL+HA AL +V RLS+R R G AG G P + SSLKY KKNG+ +AA +VA+ +P ++ + E+ IRGVERCL+EF +VWSTARLL++ A TK DF+FHL+PLLEH PARDRHE+VLVLCRG+FTP ++ S+ +V + E GG L AF+EVQ G+ E P LRAARQAFPF+E L RW+WRC+ E + G + TK+ + R R++TGVASLLV LAKADPSG TI+SM RWA E ++PEQ VAR ++ T E+F Q + +W +ACRE G V+ LLVG +D++ L G+++T VNHA+FVT FLRSMP G KAR+GYE L+ G+ PG ++ S RV SW+EAA ++D G+ASVL+V + + +S+ F QALS++L TW+SP LADYY + +K+ +V+ Y+RFL ALLG S ET+ D+R RDP+N + M+H P R+ W A+P TLAGT DP V+FRMG+DTRSCMGI+RSC NR L+GYL+QGN R VGVQS GRM+ARAVLR+L+R DN VLFMD +YY+SN D+SLE+QV+ EA+SVS+ALGIPL+RAGD +
Sbjct: 40 FADGAWENSQEYLRSIVVELASCVLPFSEDPYLPLQHAAALMLVARLSERAR------------GARAG---EEGAPVDMYSSLKYSTKKNGVVRAAAQVAQGFVPKFESSYEKLVVIRGVERCLAEFTLVWSTARLLETCAPPKTKRDFLFHLRPLLEHAPARDRHESVLVLCRGLFTPGHNKEPSRVHDNVHGVALRQEHGGCPLEEAFSEVQRGAVETPGGLRAARQAFPFVEMLTRWAWRCKLSEEEEAFA--GKRKKSVTKSFGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSREDTGVASLLVELAKADPSGATIRSMQRWACEAILPEQ-----------------VARGIICTHEIFVSGQKVQRQRWAKACREVGQVIRLLVGAMDEENLRGDDVTSMVNHALFVTAFLRSMPLGVKARKGYELLVAGGRTPGAVKGLELKQVST-RVASWREAALILDSGLASVLQVPQARSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLKVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHADPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSE-SGRMEARAVLRLLLRQDNLTPVLFMDSVYYASNLDSSLEQQVVAEAQSVSEALGIPLYRAGDKI 710
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: D7FXL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL8_ECTSI) HSP 1 Score: 631 bits (1627), Expect = 5.270e-208 Identity = 348/721 (48.27%), Postives = 455/721 (63.11%), Query Frame = 2 Query: 380 RPAFEQLENELLREPFTDSNWRNSCEYVLRVAISLASCVEPFAETPYLPLEHAEALSMVTRLSKRCRELDKGGVINEGSGKEAGGGEFLGVPAGLGSSLKYCIKKNGLGKAAGEVARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTPARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPESGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLEPLARWSWRCRTPETSSSTDNDGDVNEGDTKAVWEGSRRRK----------------------------------------RGRDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSAAGTLADRNEVARCLMSTREMFSDCQDARHLQWM---RACREAGDVLSLLVGVLDDDGLEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKSVSDALGIPLFRAGDTV 2413
R F+QL+ EL F+D W +S EY+ + + LASCV PF+E PYLPL+H+ AL +V RLS+R R G AG G PA + SSLKY KKNG+ +AA +VA+ ++P ++ + E+ IRGVERCL+EF +VWSTARLL++ A TK DF+FHL+PLLE+ PARDRHE+VLVLCRG+FTP ++ S+ +V + E GG L AF+EVQ G+ E P LRAARQAFPFLE L RW+WRC+ E + G + TK+ + R R++TGVASLLV LAKADPSG TI+SM RWA E ++PEQV E L R R ++ R +ACRE G V+ LLVG +D++ L G+++T VNHA+FVT FLRSMP G KAR+GYE L+ G+ PG ++ S RV SW+EAA ++D G+ASVL+V + +S+ F QALS++L TW+SP LADYY + +K+ +V+ Y+RFL ALLG S ET+ D+R RDP+N + M+H P R+ W A+P TLAGT DP V+FRMG+DTRSCMGI+RSC NR L+GYL+QGN R VGVQS GRM+ARAVLR+L+R DN VLFMD +YY+SN D+SLE+QV EA+SVS+ALG+PL+RAGD +
Sbjct: 4 RETFDQLQGELTSPVFSDGAWESSQEYLRSIVVELASCVLPFSEDPYLPLQHSAALMLVARLSERAR------------GARAG---EEGAPADMYSSLKYSTKKNGVARAAAQVAQGLVPKFESSYEKLVVIRGVERCLAEFSLVWSTARLLETCAPPETKRDFLFHLRPLLEYAPARDRHESVLVLCRGLFTPGHNKEPSRVHDNVHGVALRQEHGGCPLEEAFSEVQRGAVETPGGLRAARQAFPFLEMLTRWAWRCKLSEEEEAFA--GKRKKSVTKSFGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRSREDTGVASLLVELAKADPSGATIRSMQRWACEAILPEQVWEKR-----LLKRRRTGMRWREASSARTKSSSPGRRSNGSAGPKACREVGQVIRLLVGAMDEENLRGDDVTSMVNHALFVTAFLRSMPLGVKARKGYELLVAGGRTPGAVKGLELKQVST-RVASWREAALILDSGLASVLQVPQSDAKSDAFGQALSTLLTTWQSPYALADYYVMHRKDPEVLKVYVRFLLALLGLSGETVRDIRIRDPSNFEHMKHFPEDVRRQWHADPPTLAGTIDPQVIFRMGDDTRSCMGIRRSCSAQNRALMGYLLQGNARLVGVQSE-SGRMEARAVLRLLLRQDNMTPVLFMDSVYYASNLDSSLEQQVAAEAQSVSEALGVPLYRAGDKI 700
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A7S1ELQ8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELQ8_HEMAN) HSP 1 Score: 193 bits (490), Expect = 5.460e-48 Identity = 176/645 (27.29%), Postives = 275/645 (42.64%), Query Frame = 2 Query: 662 LGSSLKYCIKKNGLGKAAGEVARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTPARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPESGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLE-PLARWSWRCRTPETSSSTDNDGDVNEGDTKAVWEGSRRRKRGRDNTGVASLLVALAKADPSGETIKSMMRWAI-EGLMPEQVGEAPWSAA------GTLADRNEVARCLMSTREMFSDCQDARHLQWMRACREAGDVLSLLVGVLDDDG---LEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDET-LHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGVQSTR--DGR--MDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKSVSDALGIPLFRAGDTVPRPPKKEDDKALAGLSGPRAILARRKPKVCHLLEVNGLARFVHSD 2548
L SSLK+ KK GL + P+Y R+ A R VER +SE ++ ++ L + + A +DFV +P+LEHT RDRH AVLV G F WE F F S+ AR A+PFLE P +W+ C E ++ L+ + +AD G+ + + RWA+ EGL EA +A + + ++++ R L R++ + W+ + G ++ L D + LEG+ L N + + L+ + ++A Y + GE G ++W+ + G+ +L + E E R L+ VL WR PQ+L + +Q + + + LRA++ + + ++R+RD N Q L W A +L GT D + MGEDTR+CM + S T +G+LGYL+QGN R + + R DGR ARAV R+L+R DN E VLF+D+ Y+ RD +++A+G+ L+RA +T+P P +ALA L P+ P V L+E+ G + +V D
Sbjct: 37 LASSLKWIPKKLGLNPLISICKKGRAPTYRTNRDMRMACRDVERGVSESVLMIASHTALSALSSPARATDFVVTCRPMLEHTMVRDRHAAVLV-AGGYFRILAATERPVWEP--FKRAFPSNFAHSTWP-------------------ARAAYPFLEVPARQWAASCGAAEEVATV-------------------------------GLVERITRADTLGDVCEGLRRWAVTEGLKGRVSREAARAAVQEYEGLSSRSLKHQLMRELAGVRKLILQGESDERASWLASVVPLGAHVASLAAARDAETGELLEGQQLIVAANSVLMLAA-LKEVHFPSQAT--YSAIAAQINHCGE--------GQEGLSSAWRSTFDAVCEGVRELLELEEG---DEVVRVRLAEVLGGWRMPQLLLQMWELQGDDAECVELLKTLLRAMVSGDPKARIDEIRYRDQRNKQHFDRLDTAVVAKWSAHDGSLPGTDDVEALMMMGEDTRTCMAVHPSNANTQKGMLGYLLQGNTRLLVAGAVRGEDGRARFTARAVARLLLRRDNGETVLFVDRSYFEGERDEEAXXXXXXXXXXLAEAVGVRLYRAQNTLPPP------EALAALDPPKEGGMYPYPAV-ELVEMGGASPYVWRD 607
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A7S3UU88_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU88_HETAK) HSP 1 Score: 155 bits (392), Expect = 8.620e-37 Identity = 141/481 (29.31%), Postives = 210/481 (43.66%), Query Frame = 2 Query: 617 GKEAGGGEFLGVPAGLGSSLKYCIKKNGLGKAAGEVARDILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTPARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPESGGSSLASAFAEVQEGSAEHPRALRAARQAFPFLEPLARWSWRCRTPETSSSTDNDGDVNEGDTKAVWEGSRRRKRGRDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSAAGTLADRNEVARCLMSTREMFSDCQDARHLQWMRACREAGDVLSLLVGVLDDDGLEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERL----IGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLW 2047
G A G A L LK KK GL VA P R A GVER L E +V ARLL + ++ F+ LK L E PAR+R +A+L CRG++TP + + S V+ + + L + + EG A +AA+ A+PFLE A W+ R TS S+ T V LL L + + IK + +WA++ L+ V + + L +NEVA L +T ++F D W E G V+ L+ G +G L VN F FL + G AR+ YE + +GS K+ +S+ + VT+ +E V+D G+ + L + + + A++ +L +W P LAD+Y +K +++ ++RFLRALL SDET+ D+R R P N Q+ L A +LW
Sbjct: 1 GAAAAGARGAAAEAELARVLKQVAKKQGLNPLLRAVAAGDWPLVADERALTVAYYGVERALMEGVLVAMGARLL--WRDEVAQAMFLDPLKDLCERVPARERPQALLAYCRGLWTPGHGLHASGSNGGVYEVIRK------GLYTPYLVSGEGDA-----FQAAKGAYPFLEIPALWA-RMGQGSTSYSS---------------------------TRVVGLLQRLQRLENGATLIKGLRKWAVQFLLGPYVDDKNERLSEYL-QQNEVALSLTTTYKIFVDGVKRDRQGWQLRVMEFGRVVLLMAEYAAAPGRDGAELGAAVNRFTFGAAFLSRLNPGTAARKNYEMVATGRMGSNKLKTFLLSYKYPQAGS--VTA-EEFLGVLDEGLGAALGAEPRAMGRPEAQAAMARLLESWAQPHQLADFYQFHRKNKEISKLFMRFLRALLHLSDETVQDIRLRAPENRAQLAGLSREALRLW 436
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A7S3SCT0_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SCT0_EMIHU) HSP 1 Score: 121 bits (303), Expect = 8.190e-25 Identity = 126/483 (26.09%), Postives = 221/483 (45.76%), Query Frame = 2 Query: 1259 RDNTGVASLLVALAKADPSGETIKSMMRWAIEGLMPEQVGEAPWSAAGTLADRNEVARCLMSTREMFSDCQDARHLQWMRACREAGDVLSLLVGVLDDDGLEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERLIGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRS-CIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKSVSDALGIPLFRAGDTVPRPPKKEDDKALAGLSGPRAILARRKPKVCH------LLEVNGLARFVHSDAPVAPLD------TAGMLVREDPIPGTNYDNGRLILAELGYTETES 2668
RD++ VA +L +A+A P + I S++ W ++ +G A A + R + + + L + A A D L V V +DD G+ + +V T + S+ R + P + A S + S E LG L S R+E R AL WR+P++L YY+ +++ ++ R+LRA+ S ETL ++R AN + + + W AE C GT+ +F +GED SC+ + S + N+ L+GY++Q +VR + V + GR+ AR+V+R+L+RSD +E V+F D ++++ L+ +++ +A+++ + +G+P+ A + PP+ AG S P RR ++ + LLE +G+A + +S+ P D TAG+L R P +L++A L +++ S
Sbjct: 40 RDSSEVAYMLDRIARAGPEEKVINSLLYWLLDSWH-RAIGHGETVVA--YAPEPFLLRRQGAAARLSGELAATGRLVELCASCGAYDEEGLCV-VTEDD--VGDRMLLQVKQIETTATLMASI-----------RSACAESCPVVLSQYDALLRSPQLSLSTLERVEFDALGAMLDLEGSFVASRAEAVRSALLE----WRNPELLFRYYDDNRQDERMAPLIRRWLRAIFQLSGETLREIRRASAANRRHLDMFSEEVLERWYAEDCP--GTSQTKTLFMVGEDAGSCLRVISSEGSRYNKALMGYVLQSHVRVL-VVTDNVGRVMARSVIRLLLRSDTREPVIFADPMFFTLGFSYELQAELLYQARALQEHMGVPVVHACSVLAAPPE-------AG-SCPEGGYVRRVTELDYDVVWVELLECDGVAPYTYSEE--LPYDELLQQHTAGVLTRTAEQP-------QLVIAVLPRSDSPS 481
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A7S3ACL8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ACL8_9EUKA) HSP 1 Score: 108 bits (271), Expect = 7.240e-21 Identity = 98/386 (25.39%), Postives = 176/386 (45.60%), Query Frame = 2 Query: 1553 DGLEGENLTREVNHAMFVTTFLRSMPEGA-----KARRGYERLIGSGKVPGEHMSFSAERGSRERVTSWKEAARVMDLGMASVLRVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGI-QRSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSNRDASLERQVIEEAKSVSDALGIPLFRAGDTVPR--PPKKEDDKALAGLSGPRAILARRKPKVCH------LLEVNGLARFVHSDAPVAPLDTAGMLVREDPIPGTNYDNGRLILAELGYTETES 2668
DG E + REV + + +R+ EG + Y RLI + + + S ++ A ++DL V + A++ W P++L Y + +++ ++ R++RA+LG SDETL +R AN + ++ +P A W +E C GT+ +F +GED SC+ I + NR L+GY++Q +VR + V+ GR+ AR+++R+L+RSD V+F D ++++ + L+ + +A+++ +P+ AG +P PP E RR K+ H LLE++G+A + +S+ P D + + DN L++A L ++ S
Sbjct: 99 DGAELLRVVREVETTVLLLNTIRTSCEGRGEGVPRVVEQYMRLI----------TLPSLQLSDMEALQYRALAEMLDLEYEFVA----------SRKAAIAKAFDEWDHPELLFRYLDDNREDVQMAPLIKRWIRAILGLSDETLRQLRREAAANVRHLKRMPQAALLRWYSEACP--GTSSMVTLFLLGEDAGSCLRIIGNEGNQYNRALMGYVLQSHVRALVVRDA-SGRVLARSLVRLLLRSDTLTPVIFCDPVFFTKHYSRELQASLHAQARALELHTRVPVVHAGSLLPLLDPPLAEGGHV------------RRVEKLGHSVVWVDLLEMDGIAPYTYSEE--LPYDDL-LDQHRSGVQERTADNTVLVVAALPRADSPS 446
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A8J6C8W5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8W5_DIALT) HSP 1 Score: 108 bits (271), Expect = 2.820e-20 Identity = 119/405 (29.38%), Postives = 189/405 (46.67%), Query Frame = 2 Query: 1256 GRDNTGVASLLVAL-AKADPSGETIKSMMRWAIEGLMPEQVGEAPWSAAGTLADRNEVARCLMSTREMFSDCQDA-RHLQWM-RACREAGDVLSLLVGVLDDDGLEGENLTREVNHAMFVTTFLRSMPEGAKARRGYERL---IGSGKVPGE-HMSFSAERGSRERVTSWKEAARVMDLGMASVL-RVSEDKIRSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLW-EAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRSCI-KTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYS-SNRDASLERQVIEEAKSVSDALG----IPLFRAGDTVPRPP 2425
G D GV LL L +A+P +TI S+M W ++ L + A L + C S MF+ D RH+ + RA R GD G L TT ++ + + A R +L + S + + ++ +A G S EAA G SVL D +R+ R + + WR+P++L YY + ++ IR+LRA+ GAS E+L D+R RDPAN + + +PA W + E C GT +F +GED SC+ + + K NR L+GY +Q +VR + V + R+ AR+++R+L+RSD E V++ D ++ S S+ A+ Q+I + ++ ++AL I + AG T+ P
Sbjct: 537 GYDVDGVPFLLRRLITEANPEEKTINSLMYWVLDLLYKRALTS---HEALQLPRTQFLLECAPSRAHMFASLADVGRHVGTLVRAAR--GDAT-------------GPQLLALAKVVAAHTTLMQGLRDAGAAGRWSAQLAPRVESLMIEYDCALAAAAVSGVPALPYSMVEAA---GFGALSVLLETPVDALRTR--RAEVHEAMLEWRNPELLFRYYEDNLGDEEMRPVVIRWLRAIFGASAESLRDIRRRDPANVRHLSAIPADVLARWYDKENCP--GTASIRTLFMVGEDAGSCLRVIGTLKNKFNRALMGYCLQSHVRLLVVFDSVK-RVLARSLIRLLLRSDTLEPVVYCDALFVSASSTSAASSEQLIAQIQAQAEALAAHMRIAVVHAGCTLAAAP 915
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A7S0P113_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P113_9EUKA) HSP 1 Score: 99.0 bits (245), Expect = 1.330e-19 Identity = 60/171 (35.09%), Postives = 99/171 (57.89%), Query Frame = 2 Query: 1811 RSEKFRQALSSVLRTWRSPQILADYYNIQQKERKVMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQ-RSCIKTNRGLLGYLIQGNVRFVGVQSTRDGRMDARAVLRMLVRSDNKEAVLFMDKIYYSSN 2320
RSE+ +AL WR+P++L Y + + + ++ R+LR++LG SDETL MR AN + ++ P W +E C GT+ V+F +GED SC+ I + N+ L+GY++Q +VR + V GR+ AR+++R+L+RSD + V+F D I++S +
Sbjct: 45 RSERIGRALGE----WRNPELLFRYLSDNRDDARMAALVKRWLRSILGLSDETLRQMRRESAANVRHLRMFPKAVLLRWYSESCP--GTSSMKVLFMLGEDAGSCLRIVGNEGNRYNKALMGYVLQSHVRALVVLDA-SGRVLARSLVRLLLRSDTRTPVIFCDPIFFSKS 208
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Match: A0A7S1EIS6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIS6_HEMAN) HSP 1 Score: 95.9 bits (237), Expect = 1.850e-19 Identity = 55/132 (41.67%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 1817 EKFRQALSSVLRTWRSPQILADYYNIQQKERK-VMGNYIRFLRALLGASDETLHDMRFRDPANAQQMQHLPARARQLWEAEPCTLAGTTDPCVVFRMGEDTRSCMGIQRSCIKTNRGLLGYLIQGNVRFVGV 2209
E ++L+ VL TWR P +L Y I Q V + RFL+ALL +ETL D+R+RDP+N + + L A WEA G+TDP MG D+ +CM I+ I TNR L+ Y+ QGN R +GV
Sbjct: 5 EAMSRSLTEVLTTWRQPHLLFHYLEIHQNRNPDVASLHKRFLKALLRCGNETLRDLRYRDPSNRRHLDALDKTAAARWEAGEGP--GSTDPEDFLMMGHDSGTCMQIRSKNINTNRALISYISQGNARMLGV 134 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig100.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 12 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig100.54.1 >prot_E-siliculosus-1a_F_contig100.54.1 ID=prot_E-siliculosus-1a_F_contig100.54.1|Name=mRNA_E-siliculosus-1a_F_contig100.54.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=860bp MRITHNEVLRFTVKRVLSLATPTLLFFQSTFALHVPARTPARYGQHERTGback to top mRNA from alignment at E-siliculosus-1a_F_contig100:20017..31647+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig100.54.1 ID=mRNA_E-siliculosus-1a_F_contig100.54.1|Name=mRNA_E-siliculosus-1a_F_contig100.54.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11631bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig100:20017..31647+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig100:20017..31647+ >mRNA_E-siliculosus-1a_F_contig100.54.1 ID=mRNA_E-siliculosus-1a_F_contig100.54.1|Name=mRNA_E-siliculosus-1a_F_contig100.54.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5160bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig100:20017..31647+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |