mRNA_E-siliculosus-1a_F_contig10.45.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 659 bits (1699), Expect = 6.530e-232 Identity = 383/493 (77.69%), Postives = 403/493 (81.74%), Query Frame = 1 Query: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRELAAATVKSPPPCSINK---------KL----SVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPGKATTGKPRSQVTTEPAAAAASV-----------GNKKTRAPSNIDRNGAKKTRRGRQETEEDNDADGAGTHRSKKRRSGGKDERDAISSSTVAGENLTKSTAKTSASSPPSPAPAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPRGSNPGWQKVSPEVLSAPSSKQHGTGQRKETSVGRGQKSSKPARSTAVAESG 1410 QHRGCSNLARYGPLDSPP CQLHKRVGQFTT+R+GALFRATREGNAFR+LAAAT KSPPPCSINK +L S G SSS PK GKTS TRG++LKR ANRPGLSGG+N SQSSR+ +CLFPGCDARPDYGLPGAT AVYCFSH KGPMVQLFK TP LP + GKATTGKPRSQV TE + G KK RAP NIDRNGAK RRGRQETEEDN+ADG+GTH+S+KR SGGKDER AISSSTV GENLTK+TAK +ASS PSPAPAAEPKPPSF NNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELR QRK+YQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTP GSNPGWQKVSPE LSA S KQH TGQR+E+SVG GQK SK R T VAESG Sbjct: 152 QHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATAKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKTSGTRGQVLKR----------------ANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSGGKDERGAISSSTVTGENLTKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNPGWQKVSPETLSAASPKQHSTGQRRESSVGTGQKPSKQVRPTTVAESG 628
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 642 bits (1655), Expect = 3.220e-225 Identity = 381/488 (78.07%), Postives = 397/488 (81.35%), Query Frame = 1 Query: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRELAAATVKSPPPCSINK---------KL----SVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPGKATTGKPRSQVTTEPAAAAA-----SVGNKKTRAPSNIDRNGAKKTRRGRQETEEDNDADGAGTHRSKKRRS-GGKDERDAISSSTVAGENLTKSTAKTSASSPPSPAPAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPRGSNPGWQKVSPEVLSAPSSKQHGTGQRKETSVGRGQKSSKPARSTAVAESG 1410 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTT+R+GALFRATREGNAFR+LAAATVKSPPPCSINK +L S G SSSS PK +TS TRG++LKR ANR G+SGGHNGGSQSSRNR+CLFPGCDARPDYGLPGAT A+YCF+H K PMVQLFK P LP+ G ATTGK RSQ PAA SVG KTRAPSNIDRNGAKK RRG QETEEDND D G H SKKRRS GGKDER ISS+ V GENLTK T KTSASS P PAPA EP PPS NNRLADSSGMAPSVEFLVLRQARE AKTEAEASGLGRRPRAPSRRALEAAGRLKG GAQWMSREKKAEDLRLKAELR QRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIE+RDGEVRGEGGATTPRGSNPGW KVSPE LSAPSSKQHG+GQ K +SVGR QK SK ARSTAVAESG Sbjct: 162 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVKSPPPCSINKGDLVASDQSRLPSTGSSGASSSSSHPKPEETSGTRGQVLKR----------------ANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAGNATTGK-RSQG---PAAXXXXXXXXSVGANKTRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQHGSGQGKGSSVGRRQKPSKQARSTAVAESG 629
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 604 bits (1558), Expect = 3.490e-214 Identity = 351/423 (82.98%), Postives = 355/423 (83.92%), Query Frame = 1 Query: 142 AFRELAAATVKSPPPCSINKKLSVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPGKATTGKPRSQVTTEPAAAAASVGNKKTRAPSNIDRNGAKKTRRGRQETEEDNDADGAGTHRSKKRRSGGKDERDAISSSTVAGENLTKSTAKTSASSPPSPAPAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPRGSNPGWQKVSPEVLSAPSSKQHGTGQRKETSVGRGQKSSKPARSTAVAESG 1410 AFRELAAATVKSPPPCSINK GANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGAT AVYCFSH KGPMVQLFK TP LP NPGKATTGKPRSQ TEPAAAAASVG K RAPSNIDRN AKK RRG+QETEEDNDAD +GTHRSKKR SGGKDER AISSSTVAGENLTK+TAKTSA S PSPAPAAE PPS NNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVP ATGTEAAGDGIEERDGEVRGEGGATT RGSNPGWQKVSPEVLSAPSSKQHGTGQR+ETSVGRGQK SK ARSTAVAESG Sbjct: 11 AFRELAAATVKSPPPCSINK-------------------------------------------GANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPGKATTGKPRSQAPTEPAAAAASVGTKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRSSGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSPEVLSAPSSKQHGTGQREETSVGRGQKPSKQARSTAVAESG 390
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI) HSP 1 Score: 491 bits (1265), Expect = 9.610e-170 Identity = 313/481 (65.07%), Postives = 324/481 (67.36%), Query Frame = 1 Query: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRELAAATVKSPPPCSINKKLSVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPG------------KATTGKPRSQVTTEPAAAAASVGNKKTRAPSNIDRNGAKKTRRGRQETEEDNDADGAGTHRSKKRRSGGKDERDAISSSTVAGENLTKSTAKTSASSPPSPAPAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPRGSNPGWQKVSPEVLSAPSSKQHGTGQRKETSVGRGQKSSKPARSTAVAESG 1410 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDR+GALFRATREGNAFRELAAATVKSPPPCSI K S G SSSS P G+TSATRG C+ARPDYGLPGAT AVYCFSH KGPMVQLFK P LP+ G KATTGK SVG KKTRAPS+IDRNG+KK RRG+QETEEDNDAD +GTHRSKKRRSGGKDER AISS+ V ENLTK+TAKTSA S PSPAPAAE PPS NNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLR+KAELRQQRKQY QKVSPE LSAP SKQHGTGQRKETSVGRGQK SK ARSTAVAESG Sbjct: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPCSIFKGSS-GRSSSSSHPMPGRTSATRG-----------------------------------------------CEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKRSQGPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVSGTHRSKKRRSGGKDERGAISSAQVTKENLTKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQY---------------------------------------------------QKVSPEALSAPYSKQHGTGQRKETSVGRGQKPSKQARSTAVAESG 385
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 232 bits (592), Expect = 8.830e-66 Identity = 188/444 (42.34%), Postives = 243/444 (54.73%), Query Frame = 1 Query: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRELAAAT---VKSPPPCSINKKLSVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPGKATT------GKPRSQVTTEPAAAAASVGNKKTRAPSNI--DRNGAKKTRR------GRQETEEDNDADGAGTHRSKK--RRSGGKDERDAISSSTVAGENLTKSTAKTSASSPPSPA-------------PAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEG 1239 ++ GC A+YG ++PP CQ HKR GQ+TT+R+G L ATR+G+AFR A A + PP + +++ G ++S P+ T ++ + + K + NRPG S + S + +NRSCLFPGC ARP +GLPGA AVYCFSH KG MV LF + ++ K+ T GK + Q KK R + + D+ GAK+ RR G + T +D G HR K R + K R +S G T + A TS S SPA PA PP +R +D GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE R+ +ELR++RK+ + AGLK GVVLE FVP A A E G +RG+G Sbjct: 116 EYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIA-GTEAASARPRRRSTGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAAPTEGKKKKQTQA-----------KKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDD----GGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRAPSRRAL-----EASGRLRGDG 536
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 224 bits (571), Expect = 2.200e-64 Identity = 178/418 (42.58%), Postives = 228/418 (54.55%), Query Frame = 1 Query: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRELAAAT---VKSPPPCSINKKLSVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPGKATTGKPRSQVTTEPAAAAASVGNKKTRAPS---------NIDRNGAKKTRRGRQETEEDNDA---DGAGTHRSKKRRSG--------GKDERDAISSSTVAGENLTKSTAKTSASSPP--SPAPAAEPK-----PPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 1167 ++ GC A+YG D+PP CQ HKR GQ+TT+R+G L ATR+G+AFR A A + PP + +++ G ++S P+ T ++ + + K NRP S + S + +NRSCLFPGCDARP YGLPGA AVYCFSH KG MV LF P + +N K T A A + G +K D+ GAKK RR E++ A DG G +KK R G ER + +T A ++ + K+SA+ PP S A EP PP N S GM+PSVE L+LRQARE AK EAEASG GRR RAPSRRALEA+GRL+G GAQWM+REK+AE R+ ELR++RK+ + AGL GVVLE FV Sbjct: 62 EYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVLAVTVPPSPASSEIA-GMEAASAQPRRRSTGSSGSLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVT------------AVAPTEGKRKKXXXXXXXXXXXSMTADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNR---PSEGMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 222 bits (565), Expect = 1.670e-63 Identity = 175/415 (42.17%), Postives = 231/415 (55.66%), Query Frame = 1 Query: 4 QHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRELAAAT---VKSPPPCSINKKLSVGPSSSSFLPKSGKTSATRGKMLKRERTKVDTGEGGAKGSGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHN------PGKATTGKPRSQVTTEPAAAAASVGNKKTRAPS-NIDRNGAKKTRRGRQETEEDNDA---DGAGTHRSKKRRSGGKDERDAISSSTVA-GENLTKSTAKTSASSPPSPA--PAAEPK-----------PPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 1167 ++ GC A+YG D+PP CQ HKR GQ+TT+R+G L ATR+G+AFR A A + PP + +++ G ++S P+ T +T + + K +RPG S + S++ + SCLFP C ARP YGLPGA A YCFSH KG MV LF P + ++ P T GK + Q G+++ + D+ GAKK RR E++ A D G +KK R + +S + G +T + A TS S SPA P+ +P PP +R +D GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE R+ +ELR++RK+ + AGLK GVVLE FV Sbjct: 62 EYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIA-GTEAASAQPRRRSTGSTGSSVPSHRKPKAKLSSSVHALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKRVTPAAPTEGKRKKQK----------KGHEERKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 202 bits (513), Expect = 7.090e-57 Identity = 146/274 (53.28%), Postives = 179/274 (65.33%), Query Frame = 1 Query: 535 KATTGKPRSQVTTEPAAAAASVGNKKTRAPSNIDRNGAKKTRRGRQETEEDNDADGAGTHRSKKRR---SGGKDERDAISSSTVAGENL-TKSTAKTSASSPPSPAPAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGE---GGATTPRGSNPGWQKVSPEVLSAPSSKQHGTGQ 1335 K TTG Q T AA V + RAPSN+D+ GA K +GR+ T++ + DG + S K+R +GGKD R +S E+L T + +T+ SS SP AA KP S NR D++GMAPSVEF +LRQARE AK EA ASG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR+QR+QY+AAGLKSGVVLE FV A GT AGDG+ G V GE G ATT G +P WQKVSP +L+A ++ T Q Sbjct: 57 KKTTGTTPRQAPT----VAAGVPQGEARAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGKDNRGEVSKVNATREDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGV---GGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQATEQ 323
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 196 bits (497), Expect = 4.220e-55 Identity = 138/269 (51.30%), Postives = 172/269 (63.94%), Query Frame = 1 Query: 535 KATTGKPRSQVTTEPAAAAASVGNKKTRAPSNIDRNGAKKTRRGRQETEEDNDADGAGTHRSKKRR---SGGKDERDAISSSTVAGENL-TKSTAKTSASSPPSPAPAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPRGSNPGWQKVSPEVLSAPSSKQHGT 1329 K T KPR + A AA V +TRAPS++D+ GA + R+ + DG + S K+R +GGKD R S E+L T + +T+ SS PSP AA KP S NR D++GMAPSVEF +LRQARE AK EA SG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R+KAELR+QR+QY+AAG KSGVVLE FV A GT GDG+ G G ATT G +P WQKVSPE+L+A + ++ T Sbjct: 8 KTTDTKPR-----QTPAVAAGVPQGETRAPSSVDKTGANNAWQSRKAKNDGYSTDGGDKNSSSKKRRGSNGGKDNRGEASKGNATREDLPTTVSVETTVSSLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKIGVGSATTKHGRDPAWQKVSPEMLAASAEQEQAT 271
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 173 bits (439), Expect = 3.580e-46 Identity = 142/303 (46.86%), Postives = 167/303 (55.12%), Query Frame = 1 Query: 337 NRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATCAVYCFSHTKGPMVQLFKATPGLPHNPGKATTGKPRSQVTTEPAAAAASVGNKKTRAPS---------NIDRNGAKKTRRGRQETEEDNDADGA--GTHRSKKRRSGG--KDERDAISSSTVAGENLTKSTAKTSASSPPSPA-------------PAAEPKPPSFLNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 1167 NRPG S + S + +NR CLFPGC ARP YGLPGA AVYCFSH KG MV LF P + ++ K T AA + G +K D+ GAKK RR E++ A G HR K+ G K R +S G+ T + A TS S PA PA PP +R S GMAPSVE L+LRQARE AKTEAEASG GRR RAPSRRALEA+G+LKG GAQWM+REKKAE R+ ELR++RK+ + AGLK GVVLE FV Sbjct: 75 NRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVTP------------AAPTEGKRKXXXXXXXXRKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSR--PSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 15 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10.45.1 >prot_E-siliculosus-1a_F_contig10.45.1 ID=prot_E-siliculosus-1a_F_contig10.45.1|Name=mRNA_E-siliculosus-1a_F_contig10.45.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=471bp MQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGNAFRback to top mRNA from alignment at E-siliculosus-1a_F_contig10:109227..112448- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10.45.1 ID=mRNA_E-siliculosus-1a_F_contig10.45.1|Name=mRNA_E-siliculosus-1a_F_contig10.45.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3222bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:109227..112448- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10:109227..112448- >mRNA_E-siliculosus-1a_F_contig10.45.1 ID=mRNA_E-siliculosus-1a_F_contig10.45.1|Name=mRNA_E-siliculosus-1a_F_contig10.45.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2826bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:109227..112448- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |