mRNA_E-siliculosus-1a_F_contig1.33.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 967 bits (2500), Expect = 0.000e+0 Identity = 529/1036 (51.06%), Postives = 690/1036 (66.60%), Query Frame = 2
Query: 1532 LWDRTQDAAN---DQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNGSND-STVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEF-ERQSSGGIDQLE-DDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQ-----AWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQAD-GSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG-GET---GKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGLEARVGQTLRIIVDGVEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKT 4588
LWD TQD + + G +S GG +P +L R+L+ L + +R VG G NPW+EPPE+++++G + YF+DLYAEP R+ R+SVKVVLVGQEGAGKTSLRQSMK +A+PT N+ STV +V+ MEL+G+SVRVYDCAGQV YTGLLQMFLTPR+VCV+VCNAGEF +R+ S ++E +D KL +LRVCDWLR+IS RVPD+ ILVATKCDLV G A +G RME +CR WL+ WV+ GM+PV LEP V LTSC + G G ++ G W CDWR E D++P S LHRLV + D LRGA+MVLPRSWD AL VL+ALEHG DPVE VL+ + D G TET + +QGITV ELGT+W VDEL + G+ +T ALEGALSIREF+G+LVRH+ FVFLDVVWL++ILKPLLNHKD+ +FDG V LGDTGDT ITL D+ +SW RLK EG+LEP LA A+WP L EYVLPTL S+GLTFPLE DPD GLVVLLRL RP+ VGE I+ F + + A S WE FLGVPPGA+EKVLTRCCG+G VQTFWR+GVLV GG G+ G FA+V+EYS +E L +++GDI+T PW AL++ +S V M+ FPGL+ + L+CP+HG +MP + K GD+ L + C RCSPET GLGAAA+DL+ +VD++ +R V+F E+ +RF+ ++ +Y TG S D +L+ I+ ++ G+ ++ V +ST E + LK+LQ PNY YP L V++KD G+++ + + ++ R + DM + FLCP D++EVPCG G GY+ R R+WVKKISPV+QVTL T +VA+ A G+++ V F+ D+Q G L E D +D+ A+ A++G G D L+ T SY ALK FM+ E+R R+K A+ GDGY+DFR++M+ + DG+GG VWIRNENV KWL+S +
Sbjct: 324 LWDHTQDVQDIDPKERGDSMS-GGTMPSQLCRLLDVLDPVPSRYVGLGG-----------NPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFP------IRVGEHGERSAGNHVWKGGWACDWRNVE--DDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETG--GKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNE--------------LTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFL--ERKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-----------FSCPTGSSKTEDE---LLRKIEDMAIAMKVMTGR--------LDTVLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNG-GRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSNSS 1298
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 961 bits (2485), Expect = 0.000e+0 Identity = 532/1045 (50.91%), Postives = 683/1045 (65.36%), Query Frame = 2
Query: 1520 RLEGLWDRTQ---DAANDQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEFERQ-SSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG-GET---GKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGLEARVGQTLRIIVDG----------VEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRK--DEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKT 4588
R LWD TQ D + +GG + GG +P +L R+L L RL V+LAL NPW+EPPE+I+++G + YF+DLYAEP ++R+SVKVVLVGQEGAGKTSLRQSMK +ATPT +STV DV+ MELEG+SVRVYDCAGQV YTGLLQMFLTPR+VCV+VCNAGEF +Q S +DQ+E+D KL LRVCDWLR+IS RVP + ILVATKCDLV+G A G+R+E ACR WL++WV+ GM+PV LEP VSLTSC + N G+ Q W CDWR H + D+ P S+L+RLV + D LRG +MVLPRSWD ALTVL+ALEHG DPVE VL ++ TET +T +Q I V ELGT W VDEL K G+ +T A+ ALEGALSIREF+G+LVRH+ FVFLDVVWL +ILKPLLNHKD+ +FDG V LGDTGD ITL+D SW RLK EG+LEP LA A+WP L EYVLPTL SLGLTFPLE DPD GLVVLLRL RP VGE I+ F + Y A S WE FLGVPPGA+EKVLTRCCG+G VQTFWR+GVLV GG G+ G FA+V EYS NN L +++GDI+T+ PW AL++ S V M+ FPGL+ L+CP+HG +MP +TK GD+ L + C RCSP+T GLGAAA+DL+R+VD++ +RGV+ E+ +RF ++ +Y G S+ D R+MD ++A ++ V +ST E LK+LQ PNY YP L V+++ + KA+ KKS + ++ R + DMR+ FLCP D++ VPCG+ G GY+ + TR WVK++SP +QVT+ T +VA+ A G+++ + DF+ D++ G ++E D +D+ A+ A++G T L+ T SY ALK FM+ E+R R+K A+ GDGY++FRE M+R+ DG+GG VW+RNENV KWL S +
Sbjct: 37 RFAALWDHTQNVQDVHHKEGGDIMP-GGAMPSQLCRLLVVLDRLSG-----------VNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGES-NTGSDASKQGWACDWR-HVEGDKSSP-SLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRPTETG-VGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSST--------------NNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFL--ERRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-----------FTCPAGSSTDEDEFV-------RKMDEVKAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKS----MLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSS 1027
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 957 bits (2475), Expect = 0.000e+0 Identity = 518/1037 (49.95%), Postives = 688/1037 (66.35%), Query Frame = 2
Query: 1532 LWDRT---QDAANDQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEFERQ----SSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQ--AWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG-GE---TGKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRM-DGLEARVGQTLRIIVDGVEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTAS 4594
LW+ T +DA +++ H + GG P +L R+L+ L R + +V L LD NPW+EPPE+I+++G YF+DLYAEP RV+R+SVK++LVGQEGAGKTSLR+SMK + ATPT +STV DV+ MELEG+S+RVYDCAGQV YTGLLQMFLTPRAVCV+VCNA F +Q +GG Q+++D KL +LRVCDWLR+IS RVPD+ ILVATKCD V G A +G+R+E A R WLASWV++GM+PV LEPGV LTSCCTT N C + G T+ W CDWR + D+ P S+LHRLV + D LRGA+MV+PRSWD ALTVL+ALE G DPVE V++ L ADG + +T + GIT +L T+W A LA + +T AD ALEGAL+IREF+G+LVRH+TFVFLDVVWL +ILKPLLNHKD+ +FDG V LGDTGDT +TLED SW RLK EG+LEP LAR LWP L EYV+PT+ SLGLTFPLENDP GLVVLLRL RP+ VG+ I+ F AL W+ FLGVP GA+EKVLTRCC +GGVQTFWR GVLV GG GE +G FA+VLEYSP +E L +++GDI+T PW AL++ +S V M+ FPGL+SR L+CP+HG MPL+ GD++L + CR+CSP+T GLGAAA+DL+R+VD++ +R V+F E+ +RF+ ++ +Y+ +T S+ ++ + R + DG + G+ +++ ST E + L++LQ PNYPYP L + +E + G + + V ++ R V +M + FLCP D+++VPCG+ G GY+ R TR WVKK+SPV+QV + T +VA++A +G+D+ + DF+ D+ G +DE D ++D+ + ++G ++ T SY AL M K +R +K A+ GDGYVDFRE M+R+SDG+GG VW+RNENV KWL+S +A+
Sbjct: 252 LWNHTLNVEDARHEEASHSMQ-GGSFPRQLCRLLDVLDRAER----------EVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGG--QVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTT--NVC-EDGERSTRNQAMEGGWTCDWR--DGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNE--------------LTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKIL-EGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYS----------FSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKVL--------DSTQESLMRLQTLQAPNYPYPRLVAI--EEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGKLER--RKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAA 1233
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 939 bits (2428), Expect = 2.230e-316 Identity = 512/1034 (49.52%), Postives = 673/1034 (65.09%), Query Frame = 2
Query: 1517 NRLEGLWDRTQDAANDQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEFERQ---SSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG--GETGK--FALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGLEARVGQTLRIIVDGVEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTA 4591
N L LWD TQ+A + + G + GGQ+P +L R+L+ L R ++G LD NPW+EPP +I+S+G + YF+DLY E RV+RNSVK++LVGQEGAGKTSLRQSMK A PT +STV DV+ M+LEG+ VRVYDCAGQV YTGLLQMFLTPR+VCV+VCNA F +Q +GG Q+++D KL +LRVCDWLR++S RVP++ ILVATKCDLV G A G+R+E A R WLASWV GM+PV LEPGV LTSCC + +K + G + W CDWR +D D+ PP ++HRLV + D + LRG +MVLPRSWD ALTVL+ALE G DPVE V++ LA+ D + +T +QGITV L +W AV LA+ GV +T A ALEGALSIREF+G+LVRH+ FVFLDVVWL +ILKPLLNHKD+ +FDG V LGDTGDT +TLED SW RLK +G+LEP LAR +WP L +YVLPTL SLGLTFPL+NDP GLVVLLRL RP+ VG+ I+ F A S W+ FLGVP GA+EKVLTRCC +GGVQTFWR GVLV GG E G FA+VLEYS +E L +++GDI+T PW AL++ IS VR M+ FPGL+SR L+CP+HG M L K G +LL + GC +CSP+T GLGAAA+DL+ +VD++ +R V+F ++ RF+ ++ +Y+ S + ++ + + V + + +D L+ R+G+ L ST E + LK+LQ NYPYP L + +E + G K V + R V +M + FLCP D+++VPCG+ G GY+ R R WVKK+SPV+QV + T +VA++A +G+D+ + +F+ D+Q GF+DE D +D+ + + G + T SY AL+ FM K +R +K A+ GDGYVDFR+ M+R+SDG+GG VW+RNENV +WL+S A
Sbjct: 151 NELTALWDHTQNAQHVEEGGNRTLGGQLPSQLCRLLDVLDRATGGILG-----------LDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGG--QVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEK-STGHNASERGWACDWR--DDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNE--------------LTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLL-EPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEE------VARTLKDGLDDLKGRLGKVL-----------DSTQESLMRLKNLQAANYPYPRLVAV--EEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGKLER--RKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNA 1132
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 934 bits (2415), Expect = 2.320e-315 Identity = 548/1128 (48.58%), Postives = 697/1128 (61.79%), Query Frame = 2
Query: 1376 LRTGKIPEEFGQLRSLRHLYMNFNFLEGCIPPQLLEXXXXXXXXXXGNRLEGLWDRTQ---DAANDQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEF----ERQSSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQA--WECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQAD-GSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG----GETGKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGL--------------------EARVG-----------------------QTLRIIVDGVEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESR 4582
L TG IP+E G L+ L L ++ N L XXXXXXXXXX ++ LWD TQ D D+GG +S GG +P +L R+L+ L R + LD NPW+EPPE+I+ +G + YF+DLYAEP R+ R S KVVLVGQEGAGK+SLRQSMK TPT +STV DV+ MELEG+SVRVYDCAGQV YTGLLQMFLTPR+VCV+VCNA F ER++SG ++E+D KL +LRVCDWLR+IS RVP + ILV TKCDL G A +G+R+E ACR WL+SWV+ GM+PV LEPGVS TSC Q G +GT+ G W CDW H+ D+ PP S+LHRLV + D LRGA+MVLPRSWD L VL +LE G DPVE VL+ D G +TET+ T +QGITV +L +W VDEL + G+ +T A ALEGALSIREF+G+LVRH+TFVFLDV+WL +ILKPLLNHKD+ +FDG V LGDTGD ITL+D SW RLK EG+LEP LA A+WP L EYVLPTL SLGLTFPLE D DEG VVLLRL +RP VGE I+ F + + ALS W FLGVPPGA+EKVLTRCCG+G VQTFWR+GVLV GG G G FA+VLEYS + N + ++GDI T PW AL++ +S V M+ FPGL+ L+CP+HG M ++ K G+ L + C RCS ET+GLGAAA+DLLR+VD++ +RG +F+E+ RF ++ Y+ + G S + D +++ I + M G E R G V +ST E + LK+LQ PNY YP L V++ E G + K +S+ T+ R +A DM + FLCP D++ VPCG+ G G++ + TR WV+KISPV+QV + T +VA+ A G+++ DF+ D++ G + E D +D+ A+ +TG ++ T SY ALK FMDKE+ R K AK GDGYV FR+ M+RV+DGKGGMVW+RN+NV KWLESR
Sbjct: 11 LPTGSIPKELGALQELTFLGLSNNHLTXXXXXXXXXXXXXXXXXXXXXQISALWDHTQNVQDEDQDKGGCGMS-GGSMPGQLCRLLDVLER--------------AKIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSG---EVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGG---QHGEVGTENHGSKGDWACDW--HDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAG-GNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQ--------------IFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLKRR--CPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDALKGHYS----------FDGQAGSSKKKDGLTRMVESIIKTMKGGVDDXXXXXXXXXXXXXXVQGEVRRGFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLESTQESLMRLKNLQAPNYLYPRLVVVK--EVGSGGTSSKAHGKKSMLTKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKDVRDGLVGELVDRTLDEHALRRVVTGEEAIGADMQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKWLESR 1086
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 928 bits (2399), Expect = 8.590e-311 Identity = 525/1100 (47.73%), Postives = 681/1100 (61.91%), Query Frame = 2
Query: 1523 LEGLWDRT---QDAANDQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEFERQ---SSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG----GETGKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAV---LKHIDRRMDGLEARVGQTLRIIVDG-------------------------------------------------------------VEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTAS 4594
L LWD T QD +++G H +S GG++P +L R+L+ L R + V L+L+ NPW+EPPE+I+++G + YF+DLYAEP RV R+SVKV+LVGQEGAGKTSLRQSMKT ATPT +STV DV+ MELEG+SVRVYDCAGQ YTGLLQMFLTPR+VCV+VCNA F +Q +GG Q+ +D KL +LRVC+WLR+I+ RVPD+ AILVATKCDLV G A +G+RME ACR WLASWV+ GM+PV LE GV LTSC T ++G T+ W CDWR H D P +LHRLV + D LRG ++VLPRSWD ALTVL+ALE G DPVE V+ L A +QGITV +L +W VDELA+ + +T A ALEGALSIREF+G+LVRH+TFVFLDVVWL +ILKPLLNHKD+ SFDG V LGDTGDT +TLED SW RLK EG++EP LA ALWP L E+VLPTL SLGLTFPLENDP EGLVVLLR P+ VG+ I+ F + + A S W+ FLGVPPGA+EKVLTRCC +GGV+TFWR V V GG G FA+VLEYS NN L K++GDI+T PW AL++ +S V M+ FPGL+SR L+CP+HG M L+TK PGD+ L + C +CS +T GLGAAA+DL+R+VD++ +R +F+E+ RF+ ++ RY+ P S + + A AV + +G+ A +G I G +E V K+T EI + LK+LQ PNY YP L + +E + G + + V ++ R V +M + FLCP D+++VPCG+ G GY+ R TR WVKKISPV+QV + T +VA+ A AG+++ + +F+ D++ G DE D +D+ A+ ++G D +++ T SY ALK MDKE+ R K A+ GDGY+DFR++M+RV DG+GGMVW+RNENV +WL+S +
Sbjct: 179 LTALWDHTHYLQDIVHEEGAHGMS-GGRIPSQLCRLLDVLDRAEGGV-----------LSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGG--QIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTAN-HTVEGGWVCDWRGHIGDDSAP--GLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSS--------------ANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFL-EGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKID--GVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHEMXXXXXXXXXXXXXXXEDTKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRLENVFKNTQEILMRLKNLQAPNYLYPRLVAV--EEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEEDVDADMQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTA 1242
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 917 bits (2371), Expect = 1.050e-305 Identity = 523/1086 (48.16%), Postives = 676/1086 (62.25%), Query Frame = 2
Query: 1532 LWDRTQ---DAANDQGGHYVSNGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEF-ERQSSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTL--GQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG----GETGKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGL---------------EARVG--------------------------------------QTLRIIVDGVEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTAS 4594
LWD TQ D + + GH + GG +P +L R+L+ ++ + + N G + SL+L NPW+EPPE+I+++G + YF+DLYAE R++R VKVVLVGQEGAGKTSLRQSMK +AT T +STV DV+SMELEG+SVRVYDCAGQV YTGLLQMFLTPR+VCV+VCNAGEF E+ S IDQ+E+D KL LRVC+WLR+IS RVPD+ ILVATKCDL G A +G+RME ACR+WL+SW M V LEPGV LTSC A + G ++ W CDWR + EP S+++RLV + D LRG +MVLPRSWD ALT L +LEHG DPVE V+ +D +TET A+T +QGITV EL +W VD L + G+ +T A+ ALEGALSIREF+G+LV H+ FVFLDVVWL +ILKPLLNHKD+ FDG V LGDTGDT ITL+D SW RLK+EG+LEP LA A+WP L EYVLPTL SLGL FPLENDP EGLVVLLRL RP+ VG+ I+ F + A W+ FLGVPPGA+EKVLTRCCG+GGVQTFWR+GVLV GG E FA+V+EYS +E L +++GD++T GPW A ++ +S V M+ FPGL + YLECP+HG M KA GD+ L + C +CS +T GLGAAA+DLLR VD++ +R V+FNE+ +RF ++ +Y+ P E R G A + +++ E G L +I ++ V +ST E + L+ LQ PNY YP L V+ K+ S G A+ K +S+ ++ V DM + FLCP D+++VPCG+ G GY+ + TR WVKKISPV+QV + T +VA+ A G+ + + DF+ D++ G ++E D +DD A+ A+ G L+ T SY ALK FMDKE+ R K + GDGY+DFR+ M+RV DG+GGMVW+RNENV KWL+SR A+
Sbjct: 252 LWDHTQNVQDVDHKERGHSMP-GGPMPSQLCRLLDIFDSVEAQGL-NDTG-IGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAG---EHGESSSENFLSKSCWACDWR--DVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSDRGATET---AKTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNE--------------LIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFL-EGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKVEXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVV-KEVGSDGTAS-KARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAA 1309
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 846 bits (2186), Expect = 1.550e-275 Identity = 501/1080 (46.39%), Postives = 642/1080 (59.44%), Query Frame = 2
Query: 1532 LWDRTQDAANDQGGHYVS--NGGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEFE-RQSSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCAQKGNLGTKTLGQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQGG-GET---GKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGLEARVGQTLRIIVDGVEAVKK-----------------------------------------------STSEITLGLKSLQGPNYPYPHLAVLRK---DEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTAS 4594
LWD T +A D G +GG +P +LRR+LETL DT + GN PW+EPPE+I+++GM + YF+DLYAEP RV+R SVKVVLVGQEGAGKTSLRQSMK ATPT +STV DV MELEG+SVRVYDCAGQV YTGLLQMFLTPR+VCV+VCN FE R S Q+++D KL +LRVC WLR+IS RVP S ILVATKCDL G A +G+R+ ACR WL++WV+ GM+PV LE GV LTSCC + + + G W CDWR H D P S+LHRLV + D LRGA+MVLPRSWD ALTVL+ALE G DPVE VLQ+LA AD + + A T +QGI V +L +W A VD LAK G+ +T AD ALEGALSIR I KPLLNHKD+ +++G V LGDTGD ITLED SW R K EG+LEP LA +WP L EYVLPTL SLGLTFPLENDP GLVVLLRL RP+ VG+ I F A + W+ FLGVPPGA+EKVLTRCC +GGVQ FWR GVLV GG G+ G FA VLEYS N L +++GD + + W AL++ +S V M+ FPGL+ R L+CP+HG + L+ K GD+ L ++ C++CS +T LGAAA+DL+R+V+V+ +R V+F E+ RF+ ++ +Y P+ G S + D + + ++G A L + +E +T E + LK+LQ PNY YP L + + D G +K S+ + R V DM + FLCP D+++VPCG+ G+GY+ R TR WVKKISPV+QV L T +VA++A +G+D+ + DF+ D++ G + E D +D+ A+ ++G + T SY ALK FMDKE+ R K A+ GDGYVDFR++M+RV+DG+GGMVWIRNENV +W +SR A+
Sbjct: 516 LWDHTCNA-EDVGQERAKRMSGGTIPSELRRLLETLDGADTDLGGN--------------PWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNVEAFEQRLGSEANGQVQEDCRKLEELRVCHWLRSISRRVPYSDVILVATKCDLACGNAGDMGKRLAHACRLWLSNWVRNGMQPVRLEHGVCLTSCCPAAVSEHGES-SPGNHYAKGGWGCDWRDHRDDSSSP--SLLHRLVNKLDGGGLRGAQMVLPRSWDMALTVLEALELGRDPVEMVLQTLAGADRENLTDTAEANTDVYQGIAVEDLNAKWQATVDGLAKGGIAVTNADNALEGALSIR----------------------IPKPLLNHKDEETYEGFVNLGDTGDKQITLEDPLDIASWWRHKNEGVLEPRLAYCMWPDGLSEYVLPTLASLGLTFPLENDPTGGLVVLLRLKPDRPERVGKVIYTFCLDQTPAFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSS--------------AENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSR-CQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPV----------GSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTQESLMRLKNLQAPNYLYPGLVAVEETGADGTPSGARGMK-----SMLHKVRGVG-KDMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDVKDGLVGELVDPTLDEDALLRIVSGEEDVGADMRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDSRSNAA 1524
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 819 bits (2115), Expect = 1.750e-272 Identity = 470/988 (47.57%), Postives = 609/988 (61.64%), Query Frame = 2
Query: 1868 MKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVV----------------------------YTGLLQMFLTPRAVCVVVCNAGEF-ERQSSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSAILVATKCDLVAGRAPHLGQRMETACRKWLASWVK-------------------AGMEPVLLEPGVSLTSCCTTTANTCAQK--GNLGTKTLGQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHGSDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQG--GGETGK--FALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGLEARVGQTLRIIVDGVEA---------------------VKKSTSEITLGLKSLQGPNYPYPHLAVLRK--DEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTAS 4594
MK +AT T +STV DV+ MEL+G+SVRVYDCAGQV+ YTGLLQMFLTPR+VCV+VCNAGEF +R+ S +E D KL +LRVCDWLR+IS R+PD+ ILVATKCDL G A +G RME ACR WL+ WV+ GM+PV LEP V LTS + + GN G+K W CDWR E D++PP S LHRLV + D LRG + VLPRSWD ALTVL+ALEHG DPVEAVL DG + +T +QGITV ELGT+W VDEL + G+ +T A ALEGALS+REF+G+LVR + FVFLDVVWL +ILKPLLNHKD+ +FDG V LGDTGDT ITL+D SW RLK+EG+LEP+LA A+WP L EYVLPTL SLGLTFPLENDPDEGLVVLLRL RP+ VG+ I+ F + A S W+ FLGVPPGA+EKVLTRCCG+GGV+TFWR+GVLV G G + G+ FA+VLEYS +E L K++GDI+T W AL++ +S VR M+ FPGL+ + L+CP+HG M A GD+LL + C +CS +T GLGAAA+DL+R VD++ +R V+FN++ +RF + +Y+ P P E R D A AV G+ G+ V +ST E + +++LQ PNY YP L V+++ + + KA+ KKS V ++ RR+ DM + FLCP D+++VPCG+ G GY+ + TR WVKKISPV+QV + T +VA+ A G+D+ + +F+ D++ G ++E D +D+ A+ A++G L+ T SY ALK FMDKE+ R K A+ GDGY+DFR+ M+RV+DG+GGMVW+RN+NV KWL+S A+
Sbjct: 1 MKANKATLTGDWKEESTVVADVEPMELQGSSVRVYDCAGQVMPSAIADNPPSGVYGQWGIVSSIDLGEVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRDSEHCGGVEGDCRKLEELRVCDWLRSISRRIPDNDVILVATKCDLAGGNAREIGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDEHGDRSAGNHGSK---GGWACDWRDEE--DDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNE--------------LTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLL-EGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCP-TDPSQEEGELIRKID-DVATAVKGGFAEVEGGVSNLKGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKS----VLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAA 962
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE) HSP 1 Score: 781 bits (2016), Expect = 2.640e-258 Identity = 473/1072 (44.12%), Postives = 603/1072 (56.25%), Query Frame = 2
Query: 1589 GGQVPDKLRRILETLTRLDTRVVGNGAGMLKVSLALDRNPWSEPPEAIMSQGMAAAAMYFDDLYAEPFRVRRNSVKVVLVGQEGAGKTSLRQSMKTQRATPTNG-SNDSTVCVDVDSMELEGASVRVYDCAGQVVYTGLLQMFLTPRAVCVVVCNAGEFERQSSGGIDQLEDDIAKLCDLRVCDWLRTISHRVPDSSA--------------------------------------------ILVATKCDLVAGRAPHLGQRMETACRKWLASWVKAGMEPVLLEPGVSLTSCCTTTANTCA-----QKGN--LGTKTLGQAWECDWRRHEDTDEEPPRSMLHRLVRESDSTCLRGAEMVLPRSWDAALTVLQALEHG------------SDPVEAVLQSLAQADGSSTETSQTARTKQFQGITVRELGTEWDAAVDELAKVGVEMTRADRALEGALSIREFEGTLVRHDTFVFLDVVWLTQILKPLLNHKDKTSFDGSVFLGDTGDTCITLEDEEQKESWRRLKEEGILEPELARALWPR-LFEYVLPTLDSLGLTFPLENDPDEGLVVLLRLGSQRPKDVGEDINAFRNSYQAALSVRWEFFLGVPPGAMEKVLTRCCGIGGVQTFWRFGVLVQG-----GGETGKFALVLEYSPKSDEANSEPQDSNLGNNVLDMKVYGDITTAGPWTALAFAISTVRNMVTAFPGLKSRAYLECPEHGKDMPLSTKAASPGDQLLLQNKGCRRCSPETEGLGAAAMDLLRIVDVQANRGVVFNEMASRFLHVQQRYAGLRPMVSPDALEIATGRSSQGDTAAAVLKHIDRRMDGLEARVGQTLRIIVDGVEAVKKSTSEITLGLKSLQGPNYPYPHLAVLRKDEQSVGKANIKKSPFQSVFTRARRVAMNDMRVTFLCPADLSEVPCGHQGRGYKVRVTREWVKKISPVVQVTLTTVRVAVRAAAGVDLPVPDFVNDMQAGFLDEFADSLMDDGAVDNAITGTGTEDEGLEHVTGPSYGALKTFMDKEKRARKKTAKAGDGYVDFRERMERVSDGKGGMVWIRNENVGKWLESRKTAS 4594
GG VP LRR+L+ L +GA E I+++G YF+DL++EP R++RNSVKV+LVGQEGAGKTSL +SMK +A PT +STV DV+ M LEGASVRV YTGLLQMFLTPR+VCV+VCNA F+ +G Q++ D KL DL VCDWLR+IS RVPD+ ILVATKCDL G A G+R+E ACR WLA WV+ GM+PV +E GV LTSCC ++GN G W CDWR + D + P ++LHRLV + D + LRGA+MVLPRSWD ALTVL+ALEHG DPVE +++ LA DG A+ + GIT+ EL +W+ V ELAK + +T + ALEGALSIREF+G+LVRH+ FVFLDVVWL ++LKPLLNHKD+ S++GSV LGDTGDTCITL D SW RLK EGILEP LA+A+WP L EYVLPTL SLGL F L N+P GLV LLRL S RP VG+ ++ FR+ A + W+FFLGVPPGA+EKVLTRCC IGGV+ FWRFGVLV G GG +G FA+VLEYS +E L +VYGD + PW AL++ IS VR M+ FPGL S+ L CP+HG MPL+T S G+ +L Q ++RI+ R++G G++ E + LK+LQGPNYPYPHL V+++ E + + T+AR +AM DM + FL P D+S+VPCG G GY+ R TR WVKK+SPV+QV + T +VA++A AG+D+ + +F+ ++ G ++E AD +D+ A+ ++G L+ T SY ALK FMDKE R+K AK GDGY+DFRE+M+R SDGKGG+VW+R ENV KW +S TAS
Sbjct: 13 GGPVPSHLRRLLDVL---------DGA------------------EPIVAKGAKGIRGYFEDLFSEPCRIQRNSVKVILVGQEGAGKTSLCRSMKANKAAPTGEWKENSTVFADVEPMVLEGASVRV-------AYTGLLQMFLTPRSVCVLVCNAEAFDNLGNGVGGQVDKDCRKLEDLCVCDWLRSISRRVPDNEGGSYVIFGKVEHRTSNKRIVRSSTFWGRRQEEEHKKQPHQTHPDVILVATKCDLAGGNAWETGRRIEEACRTWLADWVRDGMQPVRVEDGVCLTSCCVXXXXXXXXXXXXKQGNDSRGNHASKGTWACDWRDNADENSSP--NLLHRLVNKRDGSGLRGAQMVLPRSWDIALTVLEALEHGWQAQHRCQTSQRVDPVEMIVRRLADTDGGEAVELAEAKGDAYHGITMEELKAKWNETVRELAKRDIAVTNPENALEGALSIREFDGSLVRHEMFVFLDVVWLARVLKPLLNHKDEESYNGSVKLGDTGDTCITLRDPLDIASWGRLKGEGILEPRLAQAMWPAGLSEYVLPTLLSLGLGFSLGNNPAGGLVALLRLRSGRPARVGKVMDTFRSKNTAVFAASWKFFLGVPPGAIEKVLTRCCSIGGVRAFWRFGVLVHGSFGDGGGSSGIFAVVLEYSSSGNE--------------LTAQVYGDASNPAPWVALSYVISAVRVMLLEFPGLHSKGSLRCPQHGGAMPLTTTPGSNGEDVLAQ--------------------MIRILG---------------------------------------------------------RIEG--------------GIQ-------ESLMCLKNLQGPNYPYPHLVVVKEIETQGNRG---------LLTKARGIAMKDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATAGLDVDISEFLQAVKEGAVEEVADCTLDEEALSRVVSGEEVAGADLQRDTRVSYEALKKFMDKELN-RRKNAKEGDGYIDFREKMQRESDGKGGIVWVRIENVQKWRDSLSTAS 926 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1.33.1 >prot_E-siliculosus-1a_F_contig1.33.1 ID=prot_E-siliculosus-1a_F_contig1.33.1|Name=mRNA_E-siliculosus-1a_F_contig1.33.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1054bp MNFNFLEGCIPPQLLELPSLEILHLSGNRLEGLWDRTQDAANDQGGHYVSback to top mRNA from alignment at E-siliculosus-1a_F_contig1:221345..231460- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1.33.1 ID=mRNA_E-siliculosus-1a_F_contig1.33.1|Name=mRNA_E-siliculosus-1a_F_contig1.33.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10116bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1:221345..231460- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1:221345..231460- >mRNA_E-siliculosus-1a_F_contig1.33.1 ID=mRNA_E-siliculosus-1a_F_contig1.33.1|Name=mRNA_E-siliculosus-1a_F_contig1.33.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6324bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1:221345..231460- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |