mRNA_E-siliculosus-1a_F_contig1.23.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: D7G6X3_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X3_ECTSI) HSP 1 Score: 645 bits (1665), Expect = 1.270e-223 Identity = 319/325 (98.15%), Postives = 320/325 (98.46%), Query Frame = 2
Query: 77 MRSEAMAPTPRTSFMGDHDDDDDAGREGHDYSSPSSSAFSCGTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFREPPAARRHDYEDV 1051
MRSEAMAPTPRTSFM DHD DD AGREGHDYSSPSSSAFSCGTSEGSRIWCNR DTMGVIMATMAL ALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVI+AAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFREPPAARRHDYEDV
Sbjct: 1 MRSEAMAPTPRTSFMDDHDHDD-AGREGHDYSSPSSSAFSCGTSEGSRIWCNRADTMGVIMATMALAALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVIAAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFREPPAARRHDYEDV 324
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A835YVM4_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM4_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.970e-62 Identity = 117/279 (41.94%), Postives = 163/279 (58.42%), Query Frame = 2
Query: 200 GTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREES-----EEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVA-EEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFREP 1018
GTSE S W N D GV A + AY F+VLW+ + + + L +++WCHLK M ++PG VP A P+ + EEGA A T+C RC+ +KP RAHHCR+C RC+ RMDHHCPW+NNC+G NQK FILFL Y L ++ Y +GL +F C + +E C +++ T+ +LV+S A++FT++ML NQ H V+ G+GTVDR+QRRRK R LRW + G G+KL W+ P D + + +LG+ P
Sbjct: 43 GTSEDSISWFNSGDWCGVTTACVVWVLEAYAAFIVLWLSIIARTYSWPHVAAFCALCALSLWCHLKVMTTDPGAVPHNARPVSAAAAEGRCEEGAEEAAVTMCARCDGFKPPRAHHCRVCRRCIARMDHHCPWVNNCIGALNQKAFILFLAYTLLLSVYGLGLGAAYFYACESGDESCLEHTPTTSTFAPTLLVLSFGALLFTVTMLANQTHSVVKGVGTVDRVQRRRKRQPPHPLTHVERALRWRRVVGTGSKLRWLLPLDIAYSERDAPLLLGYVIP 321
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S2WS54_9STRA (Palmitoyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS54_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.410e-58 Identity = 114/276 (41.30%), Postives = 167/276 (60.51%), Query Frame = 2
Query: 182 SSAFSCGTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGF 1009
SSA GT EGS +W N D G++MA+++ + + F V ++V ++ +A VIY I T + + HLKTM+++PG VP+ A PL G T+CGRC++YKP R+HHCR+CGRC+VRMDHHCPWMNNC+G NQK+F LFL Y A+ + L C +C + LT + AV+VI+ ++F SM+ NQ + ++TG+GT+DRM+RR + + PL W+D+FG N L+W P DP F + +++LG+
Sbjct: 4 SSAPFFGTQEGSTVWLNYRDPPGLVMASISWILIIFSAFAVNFLVL-EFDYSLAWIVIYDICTFLCLVAHLKTMMADPGAVPKRARPLASARNAGIP---ETICGRCDAYKPPRSHHCRICGRCIVRMDHHCPWMNNCIGAKNQKHFFLFLIYASIQCVIALVVPLVRITTC--STHC--FPGLTTHFSIAVVVIALLVLIFVSSMIYNQVYAIMTGIGTIDRMKRRARTFHLM-------PLDWSDVFGMDNWLLWPVPIDPTFE--EEDQVLGY 262
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S4N8L5_9STRA (Palmitoyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8L5_9STRA) HSP 1 Score: 213 bits (542), Expect = 7.870e-57 Identity = 121/304 (39.80%), Postives = 172/304 (56.58%), Query Frame = 2
Query: 125 DHDDDDDAGREGH-DYSSPSSSAFSCGTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYV-----LAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFREP 1018
D D DD GRE + D + S FSCGTSEGS IW N +D G +M+ AL YG F V+ +V G A+ Y + +A+ H KT ++PG VP+ A+P+ +E+ + H +C +C+S+KP HHCR+C RCV RMDHHCPWMNNC+G AN K+FILFL Y LA+ +A+ L HF + +S + L+R + V++ ++++F SM++N G++TG GT+DRM+R + G + PL D+FG G W P DP FR + +LGF P
Sbjct: 127 DSDPDDPLGREYYLDAHNEHPSGFSCGTSEGSGIWMNTSDQAGTLMSFSVWLALIYGAFTVV-LVSEQGRLPPVVAMTYCTICTLALASHAKTSFTDPGSVPKCAVPVEDETRQ---ITFHAMCSQCQSFKPQNCHHCRICDRCVSRMDHHCPWMNNCIGAANLKHFILFLIYTWIASGLALVVFALNYFLCHFFHRNVNDGTCQFSPVLQTLVRGMTVVAISSLLFVSSMIVNVAFGLVTGTGTIDRMKR---NAGINGDGAEPAPLHPEDVFGMGPVWTWPLPIDPVFR--DHDAVLGFSTP 421
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S3ZPN1_9STRA (Palmitoyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN1_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.400e-52 Identity = 111/272 (40.81%), Postives = 160/272 (58.82%), Query Frame = 2
Query: 197 CGTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFR 1012
CGT EG+R WCN+ D G +MA+M Y + VV+ VV G + IA+ IY + +A+ LKTM + PG VPR A PL SE G T+CGRC++YKP R+HHCR+C RC+VRMD +G NQK+F+LFLFY L YA+ L+L + V Y ST+ A L A+L IS A ++F +M+ NQ + ++TG+GT+DRM++R +G +F P+ W D+FG +++ PTD +R R++G++
Sbjct: 9 CGTHEGARYWCNKRDNPGAVMASMLWVLTLYAD-VVVTVVAVDGGWSIAHVPIYIFFSCLALIAQLKTMFTNPGAVPRHAQPLIRASESGIP---ETICGRCDAYKPPRSHHCRICNRCIVRMDXXXXXXXXXIGANNQKHFMLFLFYTLIEATYALALILAN----VRTGYVYSSSTV-AGLAYALLGISIATLLFVATMMYNQVYAIVTGIGTIDRMRKRGPKG-------NFAPVPWVDVFGVDPWPLYLLPTDVKYR--DFHRVMGYK 262
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S3NK54_9STRA (Palmitoyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK54_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.360e-51 Identity = 108/272 (39.71%), Postives = 162/272 (59.56%), Query Frame = 2
Query: 200 GTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTAN-LIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFR 1012
GT EG+R W NR D G +M+ + Y + V+L+V TG + I NA Y +++ MA+ LKTM + PG VPR A PL SE G T+CGRC++YKP R+HHCR+C RC+VRMD +G NQK+FILFL Y + Y++ L+LY+F V Y+ TA+ ++ A+LVI+ A ++F +M+ NQ + ++TG+GT+DRM++R +G +F P+ W D+FG M++ PTD +R R++G++
Sbjct: 10 GTHEGARYWFNRRDNPGAVMSGVLWILTLYSDVVILYVGI-TGGWSIINAPFYFLVSFMALISQLKTMFTNPGAVPRHAQPLIRASESGIP---ETICGRCDAYKPPRSHHCRICNRCIVRMDXXXXXXXXXIGANNQKHFILFLLYTIIECVYSLSLILYNFTHGVT------YANSTASAMVIALLVIALATLLFVSTMMYNQIYAIVTGIGTIDRMRKRGPKG-------NFAPVPWVDVFGVDPWPMYLLPTDVKYR--DFHRVMGYK 262
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: F0Y5U1_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5U1_AURAN) HSP 1 Score: 193 bits (490), Expect = 6.910e-51 Identity = 105/275 (38.18%), Postives = 157/275 (57.09%), Query Frame = 2
Query: 197 CGTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDY---STLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFR 1012
CGT EG+R WCN+ D G +M++M Y + VV++V G + I N +Y L+ MA+ LKTM + PG VPR A PL SE G T+CGRC++YKP R+HHCR+C RC+VRMD +G NQK+F+LFL Y + YA+ L+ A Y + S + L+ A+L +S A ++F +M+ NQ + ++TG+GT+DRM++R +G +F P+ W D+FG M++ PTD +R R++G++
Sbjct: 9 CGTHEGARYWCNKRDNPGAVMSSMLWVLTLYSDIVVVYVAV-VGGWGIYNVPLYFFLSFMALISQLKTMFTNPGAVPRHAQPLIRASESGIP---ETICGRCDAYKPPRSHHCRICNRCIVRMDXXXXXXXXXIGANNQKHFMLFLLYTIVEAVYALALI--------ATNYSNGTTYPSAACSGLVAALLAVSIATLMFVATMMYNQIYAIVTGIGTIDRMRKRGPKG-------NFAPVPWVDVFGVDPWPMYLLPTDVKYR--DFHRVMGYK 262
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S2D268_9STRA (Palmitoyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D268_9STRA) HSP 1 Score: 187 bits (476), Expect = 2.190e-49 Identity = 105/274 (38.32%), Postives = 161/274 (58.76%), Query Frame = 2
Query: 200 GTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWV-VFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVEC---VAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGF 1009
GT+E W N DT G +MA++A + Y +FVV ++ ++++ ++ A ++Y +L V+++W HLKTML++PG VPRAA PL + G T+CGRC++YKP R+HHCR+C RC++RMD +G NQK+F+LFL Y +A+ L++ EC ++E + + L +L LV S ++F SML NQ + V+TG+GT+DRM+R + P+RW D+FG WI P DP F+ R+R+LG+
Sbjct: 8 GTAEDDLHWLNVKDTPGFVMASIAWLLVFYCDFVVTYMCLYYSWSY--ALIIVYNVLVVLSLWSHLKTMLTDPGAVPRAARPLASARDAGIP---ETICGRCDAYKPPRSHHCRICNRCIIRMDXXXXXXXXXIGALNQKHFVLFLIYTWGQCTFALTLLIVRLSECDGTISECFPSEDGRLAISL----LVFSLLTLIFVTSMLYNQVYAVLTGIGTIDRMKRHTRH-------LHHMPVRWLDVFGID--AAWIAPIDPKFQ--DRDRVLGY 261
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S3XVY7_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVY7_HETAK) HSP 1 Score: 180 bits (457), Expect = 3.440e-46 Identity = 103/277 (37.18%), Postives = 155/277 (55.96%), Query Frame = 2
Query: 200 GTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAAN----HTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRR--KEGRVRGGPEDF-RPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGF 1009
GT+E +IWC+ TDT G++M+ L Y V ++ F F+ + VI+ +L + HLK M + PG VP A P + + + + +CGRC++++P RAHHC CGRC+VRMDHHC W+NNC+G NQK+F+LFL Y+ + Y++ + YH + C YC+ +S L+ L+ +V V+S +++FT MLL+Q H + TGLG VDRM + K + + +PL DI G W PT F P ++ LG+
Sbjct: 67 GTTEDCKIWCS-TDTWGLLMSFTLWAILLYSTSVYVYHSFIVHTFLEMHGVIFCVLVGATLAMHLKVMFTNPGAVPSDAEPPKTKKKRNPSLTGDPKMEVICGRCDAFRPPRAHHCMTCGRCIVRMDHHCAWVNNCIGARNQKHFLLFLLYLHITSLYSLIFMTYHLLVC-RHAYCNLWSDLSWWLLWSVFVLSFFSVMFTFFMLLSQVHAMATGLGAVDRMMSKHFAKYNSQKALDQMLVQPLGVKDICGKERCFFWACPTSVTF--PNEQQALGY 339
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Match: A0A7S1Y3T6_9STRA (Palmitoyltransferase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y3T6_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.280e-44 Identity = 112/333 (33.63%), Postives = 174/333 (52.25%), Query Frame = 2
Query: 71 WTMRSEAMAPTPRTSFMGDHDDDDDAGREGHDYSSPSSSAFSC--GTSEGSRIWCNRTDTMGVIMATMALTALAYGEFVVLWVVFFTGNFVIANAVIYTILTVMAVWCHLKTMLSEPGVVPRAALPLREESEEGAAAANHTLCGRCESYKPTRAHHCRLCGRCVVRMDHHCPWMNNCVGIANQKYFILFLFYVLAVTGYAIGLVLYHFVECVAEEYCDDYSTLTANLIRAVLVISAAAMVFTLSMLLNQFHGVITGLGTVDRMQRRRKEGRVRGGPEDFRPLRWADIFGDGNKLMWIFPTDPHFRKPQRERILGFREPPAARRHDYEDV*SAV 1063
WT R +M TP T+ M D E H + + +SC GT E IW NR D G++M+ + + Y V + ++ ++ Y + +A+ H KTM ++PG +P++A+P+ + S + H +C C+S+KP HHCR+C RCV RMDHHCPWMNNCVG N K+FILFL Y TG ++ L+++ + + E ++ + L+RA+ VI +++FT SML+N +G+ITG GT+DR++++ E P+ +FG W P DP F ++I+G+ P R D S+V
Sbjct: 66 WT-RVTSMVQTPFTTSMP-FKYDQMMPLEVHYIDTFNDQPWSCSFGTKEDDGIWLNRNDQPGLMMSFLVWLLIVYSG-VTVTLLAEHNQLPSLVSITYGTICALALASHAKTMFTDPGSIPQSAVPVYDAS---VTVSTHAMCSHCQSFKPPTCHHCRICDRCVSRMDHHCPWMNNCVGAGNMKHFILFLGYTW--TGSSLALLIFAWNYFLCESEICVFNVVLVQLVRAMSVICVGSLLFTSSMLMNVTYGIITGTGTIDRLKKKATNTLYLSEDE---PVPLEVVFGIQGYWSWFLPIDPVFA--DFDKIMGYSTPQRLLREQMRDSESSV 385 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1.23.1 >prot_E-siliculosus-1a_F_contig1.23.1 ID=prot_E-siliculosus-1a_F_contig1.23.1|Name=mRNA_E-siliculosus-1a_F_contig1.23.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=326bp MRSEAMAPTPRTSFMGDHDDDDDAGREGHDYSSPSSSAFSCGTSEGSRIWback to top mRNA from alignment at E-siliculosus-1a_F_contig1:165678..172022+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1.23.1 ID=mRNA_E-siliculosus-1a_F_contig1.23.1|Name=mRNA_E-siliculosus-1a_F_contig1.23.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6345bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1:165678..172022+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1:165678..172022+ >mRNA_E-siliculosus-1a_F_contig1.23.1 ID=mRNA_E-siliculosus-1a_F_contig1.23.1|Name=mRNA_E-siliculosus-1a_F_contig1.23.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1956bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1:165678..172022+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |