mRNA_E-siliculosus-1a_F_contig1.16.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A6H5KWA0_9PHAE (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWA0_9PHAE) HSP 1 Score: 345 bits (886), Expect = 1.710e-113 Identity = 184/195 (94.36%), Postives = 190/195 (97.44%), Query Frame = 1
Query: 121 MIMFARGLIVAALIESSSGFVNPAAARPGAVARLPTPAGAVALPRSTVSRSGRSFALGMVEQLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEEA 705
MIMFARGLIVAALIESSSGFV+PAA+RPG +ARLPTP GAVALPRS VSR GRSF LGMVE+LGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFG+C+VAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEEA
Sbjct: 1 MIMFARGLIVAALIESSSGFVSPAASRPGTIARLPTPVGAVALPRSAVSRGGRSFTLGMVEKLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGICFVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEEA 195
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A8J2S4Y9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4Y9_9STRA) HSP 1 Score: 155 bits (393), Expect = 7.480e-41 Identity = 83/127 (65.35%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 319 ETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGE 699
ETV+K G+E GLF DG+A TTA DLLKQYG AYL+TS S ++VSF +CY VSNGVD+A LLGK+GIE S +A+T GT A+AYA HKAASPIRFPPTVALTP VAK LGKGDGE
Sbjct: 54 ETVEKSGVEGGLFSIFT------GDGDAKEKATTAGDLLKQYGGAYLLTSTSFAIVSFAICYTLVSNGVDVAGLLGKIGIEPSQNAQTGGTFAIAYAAHKAASPIRFPPTVALTPVVAKMLGKGDGE 174
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A7S4D855_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D855_HETAK) HSP 1 Score: 154 bits (389), Expect = 2.780e-40 Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = 1
Query: 316 DETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGK 687
+ET KKYGLEAGLFK+++ + DGE+ ++AK+LLK+YGSAYL+TSISL++VSF +CYV V NGVD+A LL KVGIETSA++E GT A+AYA HKAASPIRFPPTVALTP VA LG+
Sbjct: 59 EETTKKYGLEAGLFKSMQ----SEGDGES--KVSSAKELLKKYGSAYLVTSISLAIVSFSLCYVMVDNGVDVAGLLSKVGIETSATSEKVGTFALAYAAHKAASPIRFPPTVALTPVVANLLGQ 176
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A7S1UM22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UM22_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.340e-40 Identity = 90/161 (55.90%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 217 RLPTPAGAVALPRSTVSRSGRSFALGMVEQLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGE 699
R PA A+ P +R E+ +E +KYGLE GLFK LK G K TAKDLL +YG+AYL TSISL+LVSF CY V NGVD+ASLL KVGI S ++ET GTVA+AYA+HKAASPIRFPPTVALTP VA+F G DGE
Sbjct: 17 RAAAPAAALRRPAPAAARPSHQV---WAEKDDMEEVTEKYGLEVGLFKTLKSGEKGSGQ--------TAKDLLAKYGAAYLTTSISLALVSFATCYYLVDNGVDVASLLAKVGISVSGTSETAGTVAIAYAVHKAASPIRFPPTVALTPVVARFFGN-DGE 165
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: L1JF57_GUITC (DUF1279 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JF57_GUITC) HSP 1 Score: 154 bits (388), Expect = 5.220e-40 Identity = 101/201 (50.25%), Postives = 122/201 (60.70%), Query Frame = 1
Query: 118 IMIMFARGLIVAALIESSSGFVNPAAARPGAVARLPTPAGAVALPRSTVSRSGRSF-----ALGMVEQLGPD--------ETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFL 681
+ I A L +AA ++ F PA +PT LP + +G SF AL MV+ +G + E KK+GLEAGLF AL + NKE D AK LL +YGSAYL+TSISLSLVSFG+CYV V NGVD+A+LL KVGI + + ET GTVA+AYA HKAASPIRFPPTVALTP AK+L
Sbjct: 2 VAIPLAMVLCLAACPMQANAFAFPA---------VPT------LPSRSAGSNGMSFRNRSPALRMVDTMGEEKSKVKNVEEVTKKWGLEAGLFTALTNKNKEGPD---------AKQLLAKYGSAYLLTSISLSLVSFGICYVLVDNGVDVAALLSKVGITANGNTETAGTVAIAYAAHKAASPIRFPPTVALTPLTAKYL 178
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A8J6CCF1_DIALT (DUF1279 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCF1_DIALT) HSP 1 Score: 150 bits (380), Expect = 1.380e-39 Identity = 82/136 (60.29%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 301 EQLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKG-DGEEA 705
+ P+E KK+GLEAG+F AL NK+ + G+ A TTAKDLL QYG+AYL+TSI L++VSF +CY+ V NGVD+++LL KVGI S E GTVA+AYA HKAASPIRFPPTVALTP VA+ +GK DG +A
Sbjct: 6 DDASPEEVTKKWGLEAGIFSALT--NKDGSGGKG--AMTTAKDLLAQYGAAYLLTSIPLAIVSFALCYLLVDNGVDVSALLAKVGISVSGGTEKVGTVAIAYAAHKAASPIRFPPTVALTPVVARLIGKKKDGGDA 137
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A061R5E1_9CHLO (Protein fam210b-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5E1_9CHLO) HSP 1 Score: 152 bits (385), Expect = 1.570e-39 Identity = 83/131 (63.36%), Postives = 99/131 (75.57%), Query Frame = 1
Query: 319 ETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGK----GDGE 699
ET +KYGLEAGLFK D + + A T AK+LLK+YGSAYLITSIS ++VS+ +CYV V GVD+A+LLGKVGI TSA++E GT A+AYA HKAASPIRFPPTVALTP VAK LGK G+G+
Sbjct: 68 ETTEKYGLEAGLFKVFTDKSSDSAK-----KATDAKELLKRYGSAYLITSISFAIVSYAICYVLVDQGVDVAALLGKVGISTSATSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLLGKKVDEGEGD 193
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A7S1SLD8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLD8_9CHLO) HSP 1 Score: 151 bits (382), Expect = 3.500e-39 Identity = 83/128 (64.84%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 319 ETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEE 702
ET KKYGLEAGLFKAL D +K+ A AK LLKQYGSAYLITS+S ++VS+ +CY V GVD+ASLL KVGI TS+++E GT A+AYA HKAASPIRFPPTVALTP VAK +GK EE
Sbjct: 63 ETAKKYGLEAGLFKALTDRSKDKVTKAA-----DAKTLLKQYGSAYLITSVSFAIVSYAICYFLVDQGVDVASLLSKVGITTSSTSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLIGKEAKEE 185
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A7R9U8Q2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Q2_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.030e-38 Identity = 89/163 (54.60%), Postives = 111/163 (68.10%), Query Frame = 1
Query: 214 ARLPTPAGAVALPRSTVSRSGRSFALGMVEQLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEE 702
A L P P ST+ R R AL ++ +E +K+GLEAGLFK+L+ GE GAAT AKDLL +YG+AYL TSISL+ VSFG+C+ V GVD+A+LL VGIE S ++ET T+A+AYA+HKAASPIRFPPTVALTP VA+F GK + E
Sbjct: 11 AALSAPLATAFAPPSTLRRP-RGVAL-RAQKEDVEEVTEKFGLEAGLFKSLR-------SGEGGAAT--AKDLLAKYGAAYLATSISLAAVSFGICFALVDKGVDVAALLKNVGIEVSGTSETASTLAIAYAVHKAASPIRFPPTVALTPVVARFFGKKEETE 162
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Match: A0A250XLP9_9CHLO (DUF1279 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XLP9_9CHLO) HSP 1 Score: 148 bits (373), Expect = 4.110e-38 Identity = 77/134 (57.46%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 301 EQLGPDETVKKYGLEAGLFKALKDGNKEDADGEAGAATTTAKDLLKQYGSAYLITSISLSLVSFGVCYVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEE 702
++L P E +KYGLEAGLFK L + ++ DG+ + T AK LL QYGSAYL+TSI+L+L+SF +CY AV+ G+D+ASLL KVG++ + ++ET GT A+AYA HKA SP+RFPPTVALTP VAK++GK G++
Sbjct: 42 DKLSPSEATEKYGLEAGLFKVL---SSKEEDGKV-SKTDQAKQLLTQYGSAYLLTSITLALISFSLCYFAVNAGLDVASLLSKVGLQVNDTSETVGTFAIAYAAHKALSPVRFPPTVALTPVVAKWIGKKAGKD 171 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1.16.1 >prot_E-siliculosus-1a_F_contig1.16.1 ID=prot_E-siliculosus-1a_F_contig1.16.1|Name=mRNA_E-siliculosus-1a_F_contig1.16.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp MIMFARGLIVAALIESSSGFVNPAAARPGAVARLPTPAGAVALPRSTVSRback to top mRNA from alignment at E-siliculosus-1a_F_contig1:130647..132409+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1.16.1 ID=mRNA_E-siliculosus-1a_F_contig1.16.1|Name=mRNA_E-siliculosus-1a_F_contig1.16.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1763bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1:130647..132409+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1:130647..132409+ >mRNA_E-siliculosus-1a_F_contig1.16.1 ID=mRNA_E-siliculosus-1a_F_contig1.16.1|Name=mRNA_E-siliculosus-1a_F_contig1.16.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1:130647..132409+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |