mRNA_E-fasciculatus_F_contig10029.45.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10029.45.1
Unique NamemRNA_E-fasciculatus_F_contig10029.45.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: D7G9J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9J3_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.790e-141
Identity = 211/229 (92.14%), Postives = 214/229 (93.45%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVKGTPPWVFYLHGISPPPA 687
            +RYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSS +HGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPT+             AEA RSIAGKLIVQCAGVKGTPPWVFYLHGISPPPA
Sbjct:  311 YRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSEQHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTTXXXXXXXXXXXXXAEASRSIAGKLIVQCAGVKGTPPWVFYLHGISPPPA 539          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A7S2V397_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V397_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.510e-54
Identity = 105/226 (46.46%), Postives = 136/226 (60.18%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGR-SIAGKLIVQCAGVKGTPPWVFYLHGIS 675
            + Y L   A  P + S+L FE+ LGATQ E F  +VFN    +   F   ++  Q   F V  K+   P SSWDG DVRVEV FEPE  GEV DTLV+SS + G YRC LRG+C+P LPQGPF + PGG ++I FRNVF  A +F+FT D+P F+V SG   ++ +K++K VT+KFT                AEAG  +++ KL V C  +   PPWV+YL G S
Sbjct:   31 YNYKLVTRANPPTALSTLHFEAPLGATQVETFTFRVFNT---KQTTFSMTVD--QPLFFEVAQKIAVDPTSSWDGHDVRVEVTFEPESLGEVQDTLVISSQDSGEYRCALRGVCTPALPQGPFVLQPGGSKDISFRNVFNEAREFSFTVDHPRFSVSSGS-VSIPSKSNKPVTVKFT----------------AEAGSGAVSAKLFVSCTSLPDMPPWVYYLQGES 234          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A7S3XZU9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU9_HETAK)

HSP 1 Score: 180 bits (456), Expect = 1.820e-46
Identity = 101/223 (45.29%), Postives = 138/223 (61.88%), Query Frame = 1
Query:    7 YTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVKGTPPWVFYLHGIS 675
            Y L+L A+ P +  +LRFE+ LG +Q E FV++ FNA   EP+ F+C +  G+   F V   V AP    W+G +V V VVFEPE  GEV DTL ++SA+ G+Y C+L G+C+P LPQGPF +A G  R++PFRNVF  A DFTF  D+P F V +  +Q++  K+SK VT+KF     Q+ G +S  ++          KL V CA +   PPWV+YL G S
Sbjct: 1268 YRLRLQAQPPAAVPTLRFEAPLGGSQQETFVLRAFNA---EPLTFDCAV--GKPLFFEVGKTVAAPAAPGWEGAEVGVRVVFEPEELGEVRDTLTVASAKGGTYACQLVGVCTPALPQGPFPVASGQARDLPFRNVFNEARDFTFVTDDPRFTVGAA-QQSLPTKSSKPVTVKF-----QSDGVTSGVVSA---------KLFVSCAALPDLPPWVYYLEGTS 1470          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A835YMW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.320e-46
Identity = 105/234 (44.87%), Postives = 139/234 (59.40%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQS--EAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPP------CSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQ-REIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVK--GTPPWVFYLHG 669
            ++Y L+L A  P  + +LRF +ALGA  +  E   ++VFN + A P  FEC +E      FR P +V AP        ++WDGQ + V V FEPE  G++ DTLV++S   G+YRC LRG C PP+PQGPF +APGG  R++PFRNVFAA  +F FT DN AFAVV G R  +  KT++++ +K+T     A                +A +LIVQC G    G PPWVFYL G
Sbjct:  953 YKYALRLVATPPREAHALRFATALGAAPAPVETLAVRVFNGAEAAP--FECRVER-HPQFFRAPARVAAPALLPPGSAAAWDGQILSVPVAFEPEAPGDLEDTLVVTSPIFGTYRCALRGACGPPVPQGPFRVAPGGAARDVPFRNVFAAPQEFAFTVDNAAFAVVGGARATIPGKTARAIQVKYTA----AXXXXXXXXXXXXXXXXVAAQLIVQCVGGANGGLPPWVFYLQG 1179          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A7S2SWL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWL9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.550e-37
Identity = 80/194 (41.24%), Postives = 105/194 (54.12%), Query Frame = 1
Query:   88 EAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVKGTPPWVFYLHG 669
            E F  + FN    +P  F+C +   +   F V     A     W+GQDV VEV FEPE  G V DTLV+   E G YRC+L G C  P PQGPF IAPGG+ ++ FRNVFA   +++FT DN AF+V +  R ++ AK + + ++ F P+ T+A                  GKL V C   +  PPWVFYL G
Sbjct:    1 ETFSFRAFNT---KPATFKCSV--AKSAFFNVEATKAADAAPGWEGQDVHVEVRFEPEQFGGVEDTLVIDGGEAGEYRCRLAGNCRRPQPQGPFDIAPGGKVDVAFRNVFATDQEYSFTVDNEAFSVAA-PRASIKAKDTYNCSVAFNPSGTEAPQ---------------TGKLFVTCVA-QDMPPWVFYLRG 172          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A7S2QVW6_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVW6_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.550e-37
Identity = 92/228 (40.35%), Postives = 125/228 (54.82%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSS-WDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGR----SIAGKLIVQCAGVKGTPPWVFYLHG 669
            ++Y L+L+A  P ++  LRFE  LG  Q+E F  K FN       +F+  +E  Q       TKV A  C   W+GQ+VR++V FEP   GEV D L + S + G Y C L G+C P LPQGPF +A GG ++I FRNVF +AMDF F CD+P F V +G   N+ A+ +K V +K+                  E GR     I+ KL V+C G +  P W++YL G
Sbjct: 4118 YKYDLELTAMPPSAAYQLRFECPLGGKQTETFTFKTFNKVGG---NFDNSVEKPQFFDVEKSTKVDA--CEDVWEGQNVRLQVSFEPSSIGEVRDVLKVQSKDFGEYSCTLVGVCKPQLPQGPFELADGGTKDIEFRNVFDSAMDFNFVCDDPRFTVNAGV-VNIPARGTKGVQVKYVKGEI-------------EEGRRGPEKISAKLSVRCVGREDVPAWIYYLSG 4326          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A813P332_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A813P332_ADIRI)

HSP 1 Score: 110 bits (274), Expect = 1.760e-22
Identity = 80/233 (34.33%), Postives = 112/233 (48.07%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVKGTP-------PWVFYLHGISP 678
            + Y L L+A       ++ F++ LG +Q    V   F + A    D+ C ++      F V   VTA P SS    +V V+V +EP   G+V  TL +SS+    Y   L GL   P PQGPFTI  GG   I F+NVFA A+ +TF+ DNP F V S  ++ + A+ S  + + F           S T   A+    +  KLIV C    G P        W++YL GI+P
Sbjct: 5039 YTYMLSLNALPARPERTIYFKAPLGGSQ---VVSAKFTSYARTKTDYVCKIDHPD---FMVDRTVTAAPSSSPSTMEVGVDVTYEPSQLGDVRATLTISSSSGSDYIFPLVGLGELPKPQGPFTIKSGGNTTITFKNVFAQALQYTFSVDNPLFHV-SKTQELIQARKSHRIVVSF---------DGSDTSNKAD----VMAKLIVSCPKTTGAPNASSSSVQWIYYLKGITP 5251          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: UPI00077AF324 (LOW QUALITY PROTEIN: hydrocephalus-inducing protein homolog n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AF324)

HSP 1 Score: 108 bits (271), Expect = 4.300e-22
Identity = 82/229 (35.81%), Postives = 115/229 (50.22%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQC---AGVKGTPPWVFYLHGISP 678
            ++Y L L+A    + + + F + LG +QS+   +  F   A   V++ C ++    T F V   +TA   SS  G +V VEV +EP   G+   TL +SSA  G Y   L G CSPP PQGP++I  G    IPF+NVF     FTF  DN  F V   +  ++ AK + +V + F        GGS       +A R   G+L+V C   AG  G   W FYL G++P
Sbjct: 4922 YQYDLNLTATPAGTEAPVHFRAGLGTSQSQ---LVRFVNFAKSKVEYSCKVDN---TDFHVEKGITAASASS-GGTEVGVEVTYEPFRLGDTRATLTVSSAIGGEYVFPLFGHCSPPKPQGPYSIKAGATTSIPFKNVFPHTTQFTFCVDNQCFNVKKSE--SIRAKKTHNVIVGFEGNQ----GGS-------KAPRM--GRLMVTCPRSAGGGGNVTWTFYLKGVTP 5128          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: A0A814YSJ5_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A814YSJ5_ADIRI)

HSP 1 Score: 108 bits (269), Expect = 7.810e-22
Identity = 79/233 (33.91%), Postives = 111/233 (47.64%), Query Frame = 1
Query:    1 HRYTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVKGTP-------PWVFYLHGISP 678
            + Y L L+A       ++ F++ LG +Q    V   F + A    D+ C ++      F V   VTA P SS    +V V+V +EP   G+V  TL +SS+    Y   L GL   P PQGPFTI  G    I F+NVFA A+ +TF+ DNP F V S  ++ + A+ S  + + F           S T   A+    +  KLIV C    G P        W++YL GI+P
Sbjct: 5014 YTYMLSLNALPARPERTIYFKAPLGGSQ---VVSAKFTSYARTKTDYVCKIDHPD---FMVDRTVTAAPSSSPSTMEVGVDVTYEPSQLGDVRATLTISSSSGSDYIFPLVGLGELPKPQGPFTIKSGSNTTITFKNVFAQALQYTFSVDNPLFHV-SKSQELIQARKSHRIVVSF---------DGSDTSNKAD----VMAKLIVSCPKTTGAPNASSSSVQWIYYLKGITP 5226          
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Match: UPI001864ABAC (hydrocephalus-inducing protein homolog n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864ABAC)

HSP 1 Score: 101 bits (252), Expect = 1.220e-19
Identity = 82/226 (36.28%), Postives = 104/226 (46.02%), Query Frame = 1
Query:    7 YTLQLSAKSPPSSSSLRFESALGATQSEAFVMKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVVFEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREIPFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQATGGSSSTITTAEAGRSIAGKLIVQCAGVKGTPPWVFYLHGISPPP 684
            Y LQL A   P   +L F + LG+ Q  A   K  N S  +  ++ C  +    T  R  T  TA       G +V VEV FEP   GE    L +SS   G Y   L G C+PP PQGPF++  G    IPFRNVF     F+F  DNPAF+V   D  ++  K + SV + F      A G  S  +T A            +  G+     WVFYL G+SP P
Sbjct: 4889 YELQLRALPAPRERALHFRAPLGSGQ--AVCAKFTNYSRVK-TEYTCKTDSPDFTVER--TVSTAAGYQG--GTEVSVEVYFEPCQLGESRGLLTVSSGLGGEYVFPLCGSCTPPKPQGPFSVRAGSSISIPFRNVFPQPTAFSFQVDNPAFSVRGAD--SIRPKKTHSVLVSFEGAPPGAHGPCSGKLTIASP----------RAEGLGQGVSWVFYLKGVSPEP 5095          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10029.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9J3_ECTSI1.790e-14192.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V397_9STRA3.510e-5446.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XZU9_HETAK1.820e-4645.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YMW6_9STRA2.320e-4644.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SWL9_9STRA5.550e-3741.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2QVW6_9STRA9.550e-3740.35Hypothetical protein n=2 Tax=Triparma pacifica Tax... [more]
A0A813P332_ADIRI1.760e-2234.33Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
UPI00077AF3244.300e-2235.81LOW QUALITY PROTEIN: hydrocephalus-inducing protei... [more]
A0A814YSJ5_ADIRI7.810e-2233.91Hypothetical protein n=1 Tax=Adineta ricciae TaxID... [more]
UPI001864ABAC1.220e-1936.28hydrocephalus-inducing protein homolog n=1 Tax=Meg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10029contigE-fasciculatus_F_contig10029:2170..5054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.6
Seed ortholog evalue1.8e-99
Seed eggNOG ortholog2880.D7G9J3
Preferred nameHYDIN
KEGG koko:K17570
GOsGO:0000226,GO:0001578,GO:0002064,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0009888,GO:0009987,GO:0016043,GO:0021591,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030855,GO:0032501,GO:0032502,GO:0032838,GO:0035082,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0060271,GO:0060322,GO:0060429,GO:0060438,GO:0060541,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1904158,GO:1990716,GO:1990718
EggNOG free text desc.axonemal central apparatus assembly
EggNOG OGs28HT9@1,2QQ4F@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-00_011480.1
Exons5
Model size1092
Cds size591
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927504.9438782-UTR-E-fasciculatus_F_contig10029:2169..25711622927504.9438782-UTR-E-fasciculatus_F_contig10029:2169..2571Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10029 2170..2571 -
1695995567.48637-UTR-E-fasciculatus_F_contig10029:2169..25711695995567.48637-UTR-E-fasciculatus_F_contig10029:2169..2571Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10029 2170..2571 -
1622927505.0063622-UTR-E-fasciculatus_F_contig10029:4955..50541622927505.0063622-UTR-E-fasciculatus_F_contig10029:4955..5054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10029 4956..5054 -
1695995567.5479925-UTR-E-fasciculatus_F_contig10029:4955..50541695995567.5479925-UTR-E-fasciculatus_F_contig10029:4955..5054Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10029 4956..5054 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927504.9583635-CDS-E-fasciculatus_F_contig10029:2571..27151622927504.9583635-CDS-E-fasciculatus_F_contig10029:2571..2715Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 2572..2715 -
1695995567.4964566-CDS-E-fasciculatus_F_contig10029:2571..27151695995567.4964566-CDS-E-fasciculatus_F_contig10029:2571..2715Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 2572..2715 -
1622927504.9679956-CDS-E-fasciculatus_F_contig10029:3260..34461622927504.9679956-CDS-E-fasciculatus_F_contig10029:3260..3446Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 3261..3446 -
1695995567.5052023-CDS-E-fasciculatus_F_contig10029:3260..34461695995567.5052023-CDS-E-fasciculatus_F_contig10029:3260..3446Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 3261..3446 -
1622927504.9771125-CDS-E-fasciculatus_F_contig10029:3904..40721622927504.9771125-CDS-E-fasciculatus_F_contig10029:3904..4072Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 3905..4072 -
1695995567.5150137-CDS-E-fasciculatus_F_contig10029:3904..40721695995567.5150137-CDS-E-fasciculatus_F_contig10029:3904..4072Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 3905..4072 -
1622927504.986091-CDS-E-fasciculatus_F_contig10029:4473..45601622927504.986091-CDS-E-fasciculatus_F_contig10029:4473..4560Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 4474..4560 -
1695995567.5244672-CDS-E-fasciculatus_F_contig10029:4473..45601695995567.5244672-CDS-E-fasciculatus_F_contig10029:4473..4560Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 4474..4560 -
1622927504.996748-CDS-E-fasciculatus_F_contig10029:4949..49551622927504.996748-CDS-E-fasciculatus_F_contig10029:4949..4955Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 4950..4955 -
1695995567.533871-CDS-E-fasciculatus_F_contig10029:4949..49551695995567.533871-CDS-E-fasciculatus_F_contig10029:4949..4955Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10029 4950..4955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10029.45.1prot_E-fasciculatus_F_contig10029.45.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10029 2572..4955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10029.45.1

>prot_E-fasciculatus_F_contig10029.45.1 ID=prot_E-fasciculatus_F_contig10029.45.1|Name=mRNA_E-fasciculatus_F_contig10029.45.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=197bp
MKVFNASAAEPVDFECHLEGGQGTHFRVPTKVTAPPCSSWDGQDVRVEVV
FEPECTGEVGDTLVLSSAEHGSYRCKLRGLCSPPLPQGPFTIAPGGQREI
PFRNVFAAAMDFTFTCDNPAFAVVSGDRQNVAAKTSKSVTIKFTPTSTQA
TGGSSSTITTAEAGRSIAGKLIVQCAGVKGTPPWVFYLHGISPPPA*
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mRNA from alignment at E-fasciculatus_F_contig10029:2170..5054-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10029.45.1 ID=mRNA_E-fasciculatus_F_contig10029.45.1|Name=mRNA_E-fasciculatus_F_contig10029.45.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2885bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10029:2170..5054- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACAGGTATACCCTTCAGCTTTCCGCCAAATCGCCCCCTTCGAGTTCCTC CCTGCGTTTCGAATCAGCTCTCGGGGCAACCCAATCCGAGGCGTTCGTGA TGAAGGTGTGGAAGATGCCAGGGTTGCTTAAAACACAAAACTAGTGGCTA GTGTGGAGGTTGTTGTCCTTGTGTTGTTTTTCGTTTGTTGGTGTGTAGGG TATACATGGTGGTGTCGTTCTTGATATGGGTCGTTGTTGTTGGATGCTGA CGTTGGTGGAAGCATCACACAAGTGTTATTGAAGGAGAAACGAAAACGTT TCTCGTAGTTGATGGAAACACTTTAGGAGAGCATTCAAGCATGTCTCGAT TATTTGCCCGCGCCCTTATAGACTTAGTGAGCAACCGCTCTGCAACCAGT TCTATGAAACGGGACAAGAAGAGCCGCAAGAGAAACACAGCCATACAAAC AGTGCATGACCCAATCATTCGTGCCTGTCATTCACACGATGAAGGTGTTC AACGCTTCCGCTGCCGAGCCGGTGGATTTCGAGTGCCACCTGGAAGGTGG TCAGGGGACACACTTCAGGGTGCCAACAAAGGTATTCACACGTGTATGTA CTTTGTCCTTCTTATCTGGCATGGGTGAGGCCTTGCACGTAGGGAACACC TATCAGTGCAACAAAGTGGTTCGGGAAAGGTCGACAATTAATTTCCATCT GCTGGTGCCAGCTAGTGGTTGGTTTGCGGTGACATCCAAGACGTTTTGTT GTTGCTTCGATGTCTTTCCATTCCTCGATTCGGCTCACACTAGTTCCAAT CGTTCGGTTGAGGTCCAGTACAAATTTGTTGTTTCGTTCAGAGAAATTAA GCGAGCCCAACAGGGGATCAAGTTTCCGGGGTGTTACCCGCGGAGGAACA CACCAATTCTTGTATCATGCTCGTCTAGCTTTACTTGTTTATGCCACCAT TCTTCCCGCTCATCCCGATACACCGGCTCCAGGTGACCGCGCCCCCGTGT TCATCCTGGGACGGCCAAGATGTGCGCGTGGAGGTCGTCTTCGAGCCGGA GTGTACGGGCGAGGTCGGGGACACACTGGTCCTCTCGTCTGCGGAGCACG GGAGCTACCGCTGCAAGCTCAGGGGTTTGTGTAGCCCCCCCCTGCCACAG GTACGTTCTTCGTCTTCTTCTACTTGTCGTTCATGATGCTGCTTTCGATG TCTCCACGTTGAAAGCCGGGCCTTTGAACGAACAACGGCCTTCGCGTGCT GTTCATGCTCAAAAAGGCCGGAGCCAAGTAACACTAAGGGTTCTATCCTA CCTCACCCCCCCTCGTCCCTGCCGTTCCGTTTCAATCGAGATGCATCGGC AAAGGGTCCAATCAATCATTGCTACGACATAGAAGTCACGTCCCCCTCCC CCCCCTTCAGCGTCGCTTTGATTGCTTTCCCTCCGCTGACGCTGTCGCCC AGATATGTATCACACTTGTTTATCATGGGCATACAAAATTAGACTCTTGT CACCCGTACAACAACCACACCTGCACCCGTCCCCTTCCACCTCCGCGAAG CAATGTCTTGCCCCCCACACTCCCCCCCTGGTGTTTCTCCTCTTGGACGT CAAAACAGGGGCCTTTCACTATTGCCCCAGGTGGGCAGAGAGAGATCCCC TTCCGGAACGTGTTCGCGGCGGCGATGGACTTCACCTTTACGTGCGACAA CCCTGCGTTTGCCGTGGTCAGCGGCGACAGGCAGAACGTCGCGGCCAAGA CGTCCAAGTCGGTCACCATTAAGTTCACTCCTACTTCTACACAGGTATAC TCCGAACACACACACGCCGTGTTTTTCGTTTCTCCTCTATTCTTGGACTA TTCTGTCGAATACTTTCCCACCGTGAGCTACAGATCTCTACGTAGTGTCT TGGGAAATAAATTGTTCCCTCCGATTAGCATGATATCTCCGCTGTTCGAT CGTCAATAGTCAGGCTGCGGAGATGTTCCTCATTCACTACCGTCCCAAAT AGCCACCACGAAGAGGAAATGCTGCCCTGGCTTGGAGTGCCGCATTCCTA TGGCACGATATTATCTTCAAAAAAGAACGGTGTATTGTCCCCTCCGGCTG GGAGACACAAAAACGAAATCAATACAACTCAACGGCCCAAGCCGTCCTTG TCCATCACAACCAGTGAGTAGCTGTCACCCCCTCCCTCCCAACCCAACCA ACCGCCTGAACACCGCTTGAAAAATAGTGCTAGTACTGTTGTAAGAACGG AATATTGTAGGACAAGAAATATTCGCATGCGCCTGTCTTACTCCATTCTG GTTGTTCCCGGCTGGGTGACAAAATACTCACGAACTCAGGCTACGGGTGG CAGTTCTTCTACTATCACCACAGCCGAGGCCGGCAGGAGTATAGCGGGAA AGCTCATCGTCCAGTGCGCCGGCGTCAAAGGAACGCCTCCGTGGGTGTTC TATCTTCACGGGATTTCGCCGCCACCCGCATAGTGTATATAGCTGAACGT ATCCGTTCGCTGGGACTGCTTGGTTGGCCAGATTTTGTATTGAGAGGAAG GAGTAGGTGCTGCGAAGAAGCGCATCCAGCTTCACGTACAGGAGGGAAAG CCTCTGGGGTGGGTGTTCCGTATTCAAATGGGAAATGTTATCGAGTATCG CCCGCGTTGCAGGTTACACGAAACCAAAAAGCATCGCACGGTCTGCCTGG TGTAGCTTCGCGAGAACACCGGGGGTGTGTGAGATCATGTGCATAGATAG GAGATTGGGAGGTCCAAAGCGTTCACGAGCGTTTTATGTTGGGGCTACCG CTAGCTCTGAGGTAGTGGGTTCTAAGAGAAGGCGGGACGATATTATTCCG GTGCTTCCGACTCGCCCCTGGCGCCCTTTTCTGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10029:2170..5054-

>mRNA_E-fasciculatus_F_contig10029.45.1 ID=mRNA_E-fasciculatus_F_contig10029.45.1|Name=mRNA_E-fasciculatus_F_contig10029.45.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1182bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10029:2170..5054- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGATGAAGGTGTTCAACGCTTCCGCTGCCGAGCCGGTGGATTTCGA
GTGCCACCTGGAAGGTGGTCAGGGGACACACTTCAGGGTGCCAACAAAGG
TGTTCAACGCTTCCGCTGCCGAGCCGGTGGATTTCGAGTGCCACCTGGAA
GGTGGTCAGGGGACACACTTCAGGGTGCCAACAAAGGTGACCGCGCCCCC
GTGTTCATCCTGGGACGGCCAAGATGTGCGCGTGGAGGTCGTCTTCGAGC
CGGAGTGTACGGGCGAGGTCGGGGACACACTGGTCCTCTCGTCTGCGGAG
CACGGGAGCTACCGCTGCAAGCTCAGGGGTTTGTGTAGCCCCCCCCTGCC
ACAGGTGACCGCGCCCCCGTGTTCATCCTGGGACGGCCAAGATGTGCGCG
TGGAGGTCGTCTTCGAGCCGGAGTGTACGGGCGAGGTCGGGGACACACTG
GTCCTCTCGTCTGCGGAGCACGGGAGCTACCGCTGCAAGCTCAGGGGTTT
GTGTAGCCCCCCCCTGCCACAGGGGCCTTTCACTATTGCCCCAGGTGGGC
AGAGAGAGATCCCCTTCCGGAACGTGTTCGCGGCGGCGATGGACTTCACC
TTTACGTGCGACAACCCTGCGTTTGCCGTGGTCAGCGGCGACAGGCAGAA
CGTCGCGGCCAAGACGTCCAAGTCGGTCACCATTAAGTTCACTCCTACTT
CTACACAGGGGCCTTTCACTATTGCCCCAGGTGGGCAGAGAGAGATCCCC
TTCCGGAACGTGTTCGCGGCGGCGATGGACTTCACCTTTACGTGCGACAA
CCCTGCGTTTGCCGTGGTCAGCGGCGACAGGCAGAACGTCGCGGCCAAGA
CGTCCAAGTCGGTCACCATTAAGTTCACTCCTACTTCTACACAGGCTACG
GGTGGCAGTTCTTCTACTATCACCACAGCCGAGGCCGGCAGGAGTATAGC
GGGAAAGCTCATCGTCCAGTGCGCCGGCGTCAAAGGAACGCCTCCGTGGG
TGTTCTATCTTCACGGGATTTCGCCGCCACCCGCATAGGCTACGGGTGGC
AGTTCTTCTACTATCACCACAGCCGAGGCCGGCAGGAGTATAGCGGGAAA
GCTCATCGTCCAGTGCGCCGGCGTCAAAGGAACGCCTCCGTGGGTGTTCT
ATCTTCACGGGATTTCGCCGCCACCCGCATAG
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