mRNA_E-fasciculatus_F_contig1618.4211.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1618.4211.1
Unique NamemRNA_E-fasciculatus_F_contig1618.4211.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 8.310e-138
Identity = 215/231 (93.07%), Postives = 216/231 (93.51%), Query Frame = 1
Query:  523 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 1215
            GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHN+RLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEG              G ERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF
Sbjct:    8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXG-ERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 237          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.090e-96
Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 1
Query:  517 VGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRL--GLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 1215
            +GGGVLAGGLHA+SGPDHLAALLPRIMG+ W  +MRIGA WGLGHGFSAT+IGLAAFF KDR+  G G   R ++ +G++TE LVGVSLI IGL+GLKESLLD    P  +  +A ++ + G  +P       K GGG+RAIF NG+LHGFSWDGAPSLAPALA ++W  VLWFLLAYC GTM AMSA TT+IGEGSVRVG+AL+QPDIP++LSVVSS +AI IGAVWL KA FF
Sbjct:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDK---PHEDDAAAAASEISGEKSP------AKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFF 226          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.350e-70
Identity = 127/238 (53.36%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  505 AFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESL-LDYEETPAFEAKS--AGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            AF+ + GG+LAG LHAV+GPDHLAALLPR +G++W+++MRIGA WGLGHG SA ++G+ AFF K RL    +  L+  +  +TE L+GVSLI IGLLGLKE+   D       EA+   AGSA            G  K     +A+F NG+LHGFSWDG P+LAPALA  SW  V+ FL +Y  GTM++MS  T+LIGEG+V+VG+ALD+P+IP+KL+  SS VAI +G VW  KA+
Sbjct:    9 AFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHNTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSIAGSAAS----------GAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 236          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA)

HSP 1 Score: 239 bits (609), Expect = 6.280e-69
Identity = 125/235 (53.19%), Postives = 168/235 (71.49%), Query Frame = 1
Query:  505 AFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            AF+ + GG+LAG LHAV+GPDHLAALLPR +G++W+++MRIGA WGLGHG SA ++G+ AFF K RL    +  L+  +  +TE L+GVSLI IGLLGLKE+   ++ +     ++ GS  + G G  GA     K     +A+F NG+LHGFSWDG P+LAPALA  SW  V+ FL +Y  GTM++MS  T+LIGEG+V+VG+ALD+P+IP+KL+  SS VAI +G VW  KA+
Sbjct:  133 AFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGS--ITGSGASGA----AKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA)

HSP 1 Score: 230 bits (587), Expect = 2.050e-66
Identity = 128/248 (51.61%), Postives = 169/248 (68.15%), Query Frame = 1
Query:  469 RRLAFAAMANAAAFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESL-LDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            R LA  AMA+AA+ A+VGGGVL+G LHA+SGPDHLAA++PR +G++W  SM++GA WGLGHG S  ++GL AF  KD+L L +   +++ + +WTE LVG+SLI IG LG+KES   D ++  A E     S                K  G  ++IFFNG+LHG SWDG PSLAPALA ++W  V+ FL AYC G +V+MS  T+LIGEGSVRVG+  D P IP++LS+ SS +AI IG +W  K +
Sbjct:   77 RPLATVAMASAASLASVGGGVLSGSLHAISGPDHLAAVVPRCIGKRWWISMQVGALWGLGHGVSGLMMGLFAFLVKDKLNL-NKSPMISNLSTWTEILVGLSLILIGFLGVKESRSFDSDKAAAKEKLEQESG---------------KKTGSFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVSMSMCTSLIGEGSVRVGR--DNPKIPQQLSMFSSGLAIVIGLLWTGKGI 306          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A7S4J5D2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5D2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.590e-63
Identity = 119/233 (51.07%), Postives = 160/233 (68.67%), Query Frame = 1
Query:  514 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLG-LGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            A+ GGV AGGLHA++GPDHLAALLPR  GQ+W+++ RIGA WG+GHG SAT++G+ AF  K+R+  +G    +V    ++ E  VG SL+ IGLLG+KE+     E      +S  +A  E G      V + +    +RA+ FNGVLHGFSWDGAPSLAPA+A+++W   + FLLAY  GTM AM+ TTTLIGEG+ + G+ L +PDIP+KLS VSS +AI +G  W + A+
Sbjct:   84 AISGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKNRMSKMGAFSNIVHGASAFMEVAVGASLVFIGLLGIKEAREWEAEIEGGSPQSLSAAAGEDG------VKVAQ----KRAVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFWCSLAL 306          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A1Z5K7J2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7J2_FISSO)

HSP 1 Score: 222 bits (566), Expect = 1.590e-63
Identity = 119/236 (50.42%), Postives = 166/236 (70.34%), Query Frame = 1
Query:  514 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRL-GLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEE---TPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            A+ GG+ AGGLHA++GPDHLAALLPR  GQ+W++++R+GA WG+GHG SATV+GL AF  K  +  +   ++++A     TE  VG+SLI IG++G++E+  ++E+   T    ++S  +AVV+           +K    +RA+ FNG+LHGFSWDGAPSLAPA+A+++WG  L FL AY  GTM  M+  TTLIGEG+ + G+ LD+PDIP+KLS VSS +A+ IGAVW   AV
Sbjct:   69 AITGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAVRVGALWGMGHGLSATVLGLTAFGLKSTVQNMKGMQKVLAGASHVTEIAVGLSLIVIGVMGIREAR-EWEQDLTTTMGASQSLSAAVVD--------EVASKHSTQKRAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAIGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAMVIGAVWCYLAV 295          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: B7G7I3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7I3_PHATC)

HSP 1 Score: 221 bits (562), Expect = 8.920e-63
Identity = 127/263 (48.29%), Postives = 170/263 (64.64%), Query Frame = 1
Query:  430 TTMGLRVLAPGGGRRLAFAAMANAAAFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAF----FFKDRLGLGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKA 1206
            TT  L ++AP G        +A AA   A+ GG+ AGGLHA++GPDHLAALLPR  GQ+W+++ R+GA WG+GHG SAT+IG+AAF     FK+ +G    + LVA     TE  VG+SLI IG++G++E+    +E    + +S  SA  +      AG+   +    +RA+ FNG+LHGFSWDGAPSLAPALA+++W   L FL +Y  GTM  M+  TTLIGEG+ + G   D+PDIP+KLS  SS +AI IG VW   A
Sbjct:   64 TTTSLAMVAPAG--------VAVAAITGAMTGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRVGALWGMGHGVSATIIGVAAFGLKNTFKNSMG-SRLQTLVAGATHVTEIAVGLSLILIGMMGIREAREWEDELDGVQPQSLSSAAAD------AGIKTAQ----KRAVVFNGLLHGFSWDGAPSLAPALAVATWSGNLAFLFSYAVGTMTTMAIATTLIGEGTRKAGDFFDRPDIPQKLSFASSILAIAIGIVWCGLA 307          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A7R9ZBQ6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 9.190e-63
Identity = 121/233 (51.93%), Postives = 158/233 (67.81%), Query Frame = 1
Query:  514 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLG-LGHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            AV GGV AGGLHA++GPDHLAALLPR  GQ+W+++ RIGA WG+GHG SAT++G+ AF  K R+  +G   R+V    S+ E  VG SL+ IGLLG+KE+     E      +S  +A  E G        M  +   +RA+ FNGVLHGFSWDGAPSLAPA+A+++W   + FLLAY  GTM AM+  TTLIGEG+ + G+ L +PDIP+KLS VSS +AI +G  W + A+
Sbjct:   87 AVSGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKSRMSKMGAFSRVVRGASSFMEIAVGASLVFIGLLGIKEAREWEAEIEGGVPQSLSAAAGEDG--------MKVAQ--KRAVVFNGVLHGFSWDGAPSLAPAIAVATWRGNITFLLAYALGTMGAMTIATTLIGEGTRKAGEVLHRPDIPQKLSYVSSIIAIGVGLFWCSLAL 309          
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Match: A0A1E7FPG4_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPG4_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.390e-60
Identity = 123/266 (46.24%), Postives = 163/266 (61.28%), Query Frame = 1
Query:  415 VSTTPTTMGLRVLAPGGGRRLAFAAMANAAAFAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVAMMGS-WTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 1209
            +  T TT  L V  P           A AA    + GG+L G LHA++GPDHLAALLPR  GQ+W+ + RIG  WGLGHG S T++G+  +  K +L      +++    + + E  VG+SLI IG++GLKE+    EE       S  SAV     TP  G    K+  G RA+ FNG+LHGFSWDGAPSLAPALA++SWG  L FL AY +GT+  M+  T+LIGEG+ R G+  ++PD+P+KLS  +S +AITIG VW   A+
Sbjct:   64 IRPTSTTTSLSVATP-----------AVAAVTGVITGGILGGALHAIAGPDHLAALLPRCCGQRWYNAGRIGILWGLGHGTSVTILGILGYALKSQLTKASGAKVILTGAAHFMEVAVGLSLIIIGIMGLKEAREWGEEMEELPTYSLSSAV-----TPSEG----KANNGNRAVIFNGLLHGFSWDGAPSLAPALAVASWGGNLAFLSAYAAGTIGVMAIATSLIGEGTRRAGEVFNRPDLPQKLSFFTSLLAITIGVVWCGLAL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1618.4211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJP2_ECTSI8.310e-13893.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVB1_9STRA2.090e-9668.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DEM4_9STRA1.350e-7053.36Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPT7_9STRA6.280e-6953.19Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2Y0T2_9STRA2.050e-6651.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4J5D2_9STRA1.590e-6351.07Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1Z5K7J2_FISSO1.590e-6350.42Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
B7G7I3_PHATC8.920e-6348.29Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9ZBQ6_9STRA9.190e-6351.93Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A1E7FPG4_9STRA1.390e-6046.24Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1618contigE-fasciculatus_F_contig1618:2220..8184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.8
Seed ortholog evalue1.3e-111
Seed eggNOG ortholog2880.D8LJP2
Preferred nameNIK1
EggNOG OGs28N5Y@1,2QUR7@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_002800.1
Exons5
Model size2079
Cds size1107
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928081.6373897-UTR-E-fasciculatus_F_contig1618:2219..30801622928081.6373897-UTR-E-fasciculatus_F_contig1618:2219..3080Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1618 2220..3080 -
1695995816.1028056-UTR-E-fasciculatus_F_contig1618:2219..30801695995816.1028056-UTR-E-fasciculatus_F_contig1618:2219..3080Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1618 2220..3080 -
1622928081.7047026-UTR-E-fasciculatus_F_contig1618:7702..77311622928081.7047026-UTR-E-fasciculatus_F_contig1618:7702..7731Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1618 7703..7731 -
1695995816.1536214-UTR-E-fasciculatus_F_contig1618:7702..77311695995816.1536214-UTR-E-fasciculatus_F_contig1618:7702..7731Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1618 7703..7731 -
1622928081.733795-UTR-E-fasciculatus_F_contig1618:8102..81841622928081.733795-UTR-E-fasciculatus_F_contig1618:8102..8184Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1618 8103..8184 -
1695995816.1615744-UTR-E-fasciculatus_F_contig1618:8102..81841695995816.1615744-UTR-E-fasciculatus_F_contig1618:8102..8184Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1618 8103..8184 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928081.6496518-CDS-E-fasciculatus_F_contig1618:3080..32391622928081.6496518-CDS-E-fasciculatus_F_contig1618:3080..3239Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 3081..3239 -
1695995816.1170676-CDS-E-fasciculatus_F_contig1618:3080..32391695995816.1170676-CDS-E-fasciculatus_F_contig1618:3080..3239Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 3081..3239 -
1622928081.663401-CDS-E-fasciculatus_F_contig1618:4606..49841622928081.663401-CDS-E-fasciculatus_F_contig1618:4606..4984Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 4607..4984 -
1695995816.1266694-CDS-E-fasciculatus_F_contig1618:4606..49841695995816.1266694-CDS-E-fasciculatus_F_contig1618:4606..4984Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 4607..4984 -
1622928081.67834-CDS-E-fasciculatus_F_contig1618:5820..59781622928081.67834-CDS-E-fasciculatus_F_contig1618:5820..5978Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 5821..5978 -
1695995816.1375368-CDS-E-fasciculatus_F_contig1618:5820..59781695995816.1375368-CDS-E-fasciculatus_F_contig1618:5820..5978Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 5821..5978 -
1622928081.6917102-CDS-E-fasciculatus_F_contig1618:7290..77021622928081.6917102-CDS-E-fasciculatus_F_contig1618:7290..7702Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 7291..7702 -
1695995816.145633-CDS-E-fasciculatus_F_contig1618:7290..77021695995816.145633-CDS-E-fasciculatus_F_contig1618:7290..7702Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1618 7291..7702 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1618.4211.1prot_E-fasciculatus_F_contig1618.4211.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1618 3081..7702 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1618.4211.1

>prot_E-fasciculatus_F_contig1618.4211.1 ID=prot_E-fasciculatus_F_contig1618.4211.1|Name=mRNA_E-fasciculatus_F_contig1618.4211.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=369bp
MVVAVARTLAAGVALALATRARGFVAPAAVTTMSGARPCSSRWPCSRTQS
SAQQQQQQQKQQQGVAFAPTSQFLGCASRGRRRIAAQGCAPSAGCTAAAG
AVSTTPTTMGLRVLAPGGGRRLAFAAMANAAAFAAVGGGVLAGGLHAVSG
PDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGL
GHNERLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGS
AVVEGGGTPGAGVGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSS
WGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVS
SFVAITIGAVWLAKAVFF*
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mRNA from alignment at E-fasciculatus_F_contig1618:2220..8184-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1618.4211.1 ID=mRNA_E-fasciculatus_F_contig1618.4211.1|Name=mRNA_E-fasciculatus_F_contig1618.4211.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5965bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1618:2220..8184- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAGGAGTTCGGATCGACTAGTGGTTTCTTGTCCCGCCGTACTTGAGCTCG GTTCTTGTGACACGCGGCCGAGCGTGAGAGAGGTGATGGTCTGCGTGTCT GCGTCGTGCACCTCCCAAAGGAACCCCCATGTAGCCTTGCAGTGCAAAGT AGCGGGCAGAGCTACCATGTTGTCCGCCGCCGTATCACGTGGAGCACCAG CTGTGACAAGAGTGAGAACCACCTGTGGGGCAACAGTGGGACTCATAGAC AGGCATGGCGTCCCTGTTCGTTGTTTGCAAATATAGGCTCCTACAAAGTT GATGCTCATGTACTATCCAACTGGAGTTGCACCTGGCCGCCCATGTGGCT CCTGCACCGCTCACCCGTGCTAGCGCGCAACCTCGCCGCATGTGTGTGTG TGTGTGTACTTGTGTTTCATCTGCTGTTAAACCTACCTGGGCCCGACACG CAGGGAGCCGGCGCAGCAACAGCAGGGGAAGGATGGTGGTCGCTGTAGCA AGGACGCTCGCGGCGGGGGTGGCCCTGGCCCTGGCGACAAGGGCGCGAGG CTTCGTGGCGCCAGCAGCAGTAACGACGATGTCGGGAGCCCGACCTTGCA GCAGTAGATGGCCCTGCTCAAGGACACAGTCGTCGGCGCAGCAGCAGCAG CAGCAGCAGAAGCAGCAGCAAGGTGTCGCGTTTGCACCAACTTCGCAGTT TCTTGGCTGCGCGAGCCGTGGTCGGCGACGAATAGCGGCGCAAGGGTGCG CCCCCTCTGCTGGCTGTACCGCTGCCGCTGGTGCGGTTTCAACAACGCCC ACGACGATGGGGCTGCGGGTTCTGGCGCCCGGGGGCGGGCGGCGCCTAGC CTTCGCGGCTATGGCCAACGCGGCCGCGTTCGCGGCGGTGGGAGGTACGG TGTGTCCTGCCGAGCGTTCGAGATTTTAGAGATGTCGCGCCCTGAGCGTG CGCACTGCTGAGCACGGGAAATATGTTCCCAACTGCTATTTACCTACTGC CGTACATACTAGTCTCGTGTTGAAGCCAACAGCAGTCATGATGCACGATA ATATATTGTCGCACGGATACCGGATAGGACGTGGGGTTACAAACGGGCAG CCCGGGGTTGTCTCTGGCAAGCATCACAGCAGTCGTGGGAGGTGGACGTG CGACTTTTTCCCTGCTTCAACCTGTCGCCTAGCCACCCAATCCTGCCCCC GATTTTCGTGTTAAATTCCGAAGATATTTGAACATGCACTTCCCGTAGAT GCCAATTGCGCATGGTGTACGACCAGCGGGGTGTGCGGACAGGTATCTTC GCCACCTAGACCCAGTCCTGGTTACACAAACGCCTGCCTTCGGTCGCAGT AGGGCTTGCCCAGATACCTTCAGCGGGAGAGGTCAGGCACGTATTTATTC GATGCTATCAGGTAAAATCGAAAGGGCAACATGTTTCAAGCGCAACACAA AGGTGCAGACCACGCTATTCTTGTTTGAGTTAAAATTGAGCTTGTCGAGG ATCAGCCATCAGTTCAAGTTTTTTTTTTAACTTGGAATATTAGTTTGCAT ATATACCTTTGCTTGAGCCTCGGTTTCACCGCAAGGAGAAGGCCAAGGTG GGAAAAACAAACCAAAGAAAGTCCCTGTATTGCCTTCCTCCTGTGTGACC TCCGCTAATGTACGTCGAACATTTTGTTCAGCGAGCAGTGCCCAGAAAGG TGAAGCATGTCACCGGACAAGATGGGGACGAAAACGCCTACCTGACTCGC AATTTCTCATGACACGGTTCCATCCGTAAGCGGTATCGCTTCCTGTAAAG CTGAGGAGTTGCTGAACGTGGCGGCTGCAAACGGTTAGCAGTTACTGCCC TTGCGTTACTTGCCAAAGGCAACAATCCGCTATCGTTGTGTGTGCGAGTT GCCCGAGGCAAATTCCGCAATCGCTGTGTGCGCACGCCGTCATGTTGTCA ATTTCTTCAATGACGAGCGCAAGCGCCAAATGCGGTGAAACCCCAGTATT TAGACCCACCTCGTCACTGAGACCACGGGCGCAATTCCTACCCATACACG CGAGCTTGTACACCTCGAGAATACAAACCCGGACATTGCTCTGTGCATTG CGTAGTCACGAAGTATGCACATCCTGTGCATCAAGGTGAACATGCATCCG GCCAACGCTCAGACGGTCGCAACACGAACACGAAACGAACGTCTCTATCG CACCAGGTGGGGTGCTAGCGGGGGGGCTGCACGCAGTGTCTGGACCCGAC CACCTGGCCGCGCTGCTGCCGCGCATCATGGGGCAGAAGTGGCACAAGTC GATGAGAATCGGAGCCACGTGGGGACTCGGCCACGGCTTCAGCGCCACGG TCATCGGGCTTGCGGTGAGACGTTGCACGGCATGCCGCTGCTGTGTGTTG GTGCTCTTGCTTCGGCTCATTTTTCTCATTTTTCCGTCTTTTCTTTCTGA CCGATTAGTCTTGGAAATAAAGTCTTGAGAGTCGGTAAGGAAGGTGGAGC GGCCGTTGCTGCCGGGAGTGGAACTGTCTCACAACCGATTGACTTACGTG AACTATGGTAGCAAGTGCTGGTAGCCTTTGCTGGCATGTTTTGTTGCCCG TCGTGTGCGCGCCTAGTTAAGGTTTATTTCTCCTACCGTATCGGGCAACA CTACCAGTATCGGCAAGATGCCCGTCCAAACGGCAAGACTTGTCGTCTAA ACATCGTGTTGGGCACTGGCGCGATGCATACCATCAAGCGCGCCACGTCA AGCCCATCCTTCGTGAAGTGGTTTGCATCCAGAATACTACCTTCCACCAA GAGTACTACCTCCACCAAGAGTACTACCTTCCACCAAGAGTACTTCCACC AATAATACTACCTTCCACCAAGAGTACTACCCTTCCACCAAGAGTACTAC CTTCCACCAAGAGTACTTCCACCAAGAGTACTACCTTCCACCAAGAGTAC TACTTCCACCAAGCGCGGGCAAGGTTTCCCTCAAGCCAGAGAGAGTATTA CCCGCAAGGAACTCCACCACGTCCCGGCACCCCTCTATTTCAGATACGGT ATTTATTTGGCTCTATATTTTCTGCGGTGACCCTAAGTTGTAGAACCTCC GTGTGCAAAATCTTCTTCACGCGAAAAGTCATGACTCCGTGTGGCAGGCA ACGGAATGACTGAACACACCCCACCCCGCCTTCCCTCCACGACACGGCAG GCGTTTTTCTTCAAGGACCGGCTGGGGCTCGGGCACAACGAGCGGCTCGT GGCCATGATGGGCAGCTGGACGGAGGGCCTGGTCGGCGTCTCCCTCATCG CCATCGGACTCCTGGGCCTCAAGGAATCCCTCCTGGACTACGAAGAAACC CCCGCCTTCGAGGCGAAGAGCGCCGGCAGCGCGGTCGTGGAGGGGGGCGG CACGCCGGGGGCCGGGGTGGGCATGACTAAGAGCGGCGGCGGGGAGAGGG CCATCTTCTTTAACGGCGTTCTTCACGGGTTCTCTTGGGACGGGGCCCCG AGCCTGGCGCCGGCGCTCGCGCTGTCGTCGTGGGGTAGCGTGCTGTGGTT CCTGCTGGCCTACTGCTCGGGGACGATGGTGAGCTAGCTAGCCTCTGCCG ATGCCGTCGTCTTTTGCAGAGTTTCTTGCGGTGCTTTGGCGTGATTCTCC TGCTCCTGCTGCTTCTGCTGCTGCTGCTGTCGTTGTTGGATGTGACGTAC GAAGTCCGAACGATGTGGTGCGCTTGTCATCGGTGGTGAATTTTTCCGTT GTTGCGCCTTGTGTGTCGCTCACGCGGGCGTGGCTCGTTTCTTCTTTCGC CACCGCAACAAGGTGGGCCGAAGAGGAAAGGAAAGTTTTTAGTCTTACCG AAGAGGAAAGGAAAGTTTTTAGCCTTACTGTTCGTCGTTGTTTCCTACCA TTTGATTCATGTGCGCGGGATATCAGTTGCATCGTTACCTGTGTATAGGG TCAGCACAGAAGAAGTCGACGTATGGCGTCGCAAGGGCCGCTGCTATTCG TTCATGGCTGGGTACACACAGAAGAGCTCCAACCTCTGTCATAAAGCAAC TGGTTCCACCTATCATGGGGCTTGCGCTCTTTTACGCTTCACCACTTACC CTATCTCTTGCTCTGTACTGCTGTTGTTTGTCGGGTTGACGGGGTATGCT CTTAGAGCAGTCTGCGAATAGGTCGCGTGTGTCTGTTCTGCCACAACACG ACGAGAAGCTCAGTTGGTGGTGGATTAGAGGGATGTTACGCGGGCCCCCG GGGCGTGTTGTTCTACACATGTGCAAACTGTCCAGAGAGGTCGTTATTTG TTATTTCGACTGTGGTATTCTTCGTTGCTCATCAATTTTCCACGTTGCAT GTATTAGTTGACACCCTGAAGTAGAGACCACCGTGGCGTTTGGTGTTGTA GTCTTGACGCGGGTTTCTTTCCCCTGGGCGATTTTGAAAAGATTGGGGGT CGAAGATGTTTCAAGGTTTTAGTGCTGCTGCACCGAAGGGGGGGGGGTCG GATGGGCACCCCCTCGCGATGTAGCAGTCAAGGGGGTTATCCCTAAAATG AGGGCGGAAAAAACAGTAGCTCGTCCGTGGCCTTGCTCTTTTGTGTCCCC GGCTGGTGCGTCCTTTGTCCGTGTACACCGAGAGGTGTGGTCTGGCAGTC AAACGAGATGGGGTGACACCGCCCCCCTCCCCCTACCGGAAAACCTTTTG GAACCACCTTTGGCGAAGTACTGTAGGAAGGAACGATTTAGCCACCAATG ATCGGTCCTATGGGAACAATGCTCCGTATCCTCGAGCACGCGTCGTCAAT GGTCTAACCGCTACATGTAGGGCATATGGTACAAAACATGAGTACGCCAC CCCCCCCTCCGCGAGGACCTCCCTCTTGACCATGAATCCCCCCCCCCTTT TCCTCGTCTCTCGTTTCGTTTCTTTTGGCCGGGGTACCTTTTCAGGTGGC CATGTCGGCGACCACCACCTTGATCGGAGAGGGTAGCGTAAGAGTCGGCA AGGCCTTGGACCAGCCGGACATACCGAGGAAGCTGTCGGTGGTTTCGTCG TTCGTGGCCATCACCATTGGTGCCGTTTGGCTGGCGAAGGCGGTGTTCTT TTAGCCTTTCCCCCAGAAATCCAGGAGGACACGATTTTGAGACTACATGC AAGAGCACCCCGTCTTGGCTCTCGGGTCAGAGCTAGACGATATGGTGAAG GCGGGAAGCAAGCACTACTTTTGGAATTTAGGGTATTATAGCAAGAAGGG AGTAGTGTTTCGAGAACAGCGGGAGAAAAACATGTCGCCTTTGCAGAGAT AGGGACGGGAGACGCCGGGGAAATTGTCGGGGTAAGATAGCCATACAACA AAGTTTGCAGCTTAGGGAGTGCTCCGTGTTAACGTCGGCCTTACAGTGAC TGGCGTGTGGGCAGCAGTTTGTTGTTTCCTTCTCCAGCTAGTTTCGGGGC TTGAACAATACAACGGTGCTGCCTTGCAGTATCGGTTCTCGATGGCGATT CTAAGACAAAGTCGAGCAGAGTTGTTTTCTCTCATGAACCCGCGTGCAGA GTTTTCGATGCTGGTGCCAAGGAACTTTAGTTGTGCGACGGCAGTCTGGG TATCGTGTGGTCCGCGTGTGGTGTATTCGCCGTAGTGAGCCCTCATGCTG AAAACCAGCGTCACTTGTATCGGCGTTATTATTGCTTGAATGGCCCGTTT ACTGATGGCAGTCTGATTCAATTCCCTCTCTCAATGGATAATGCGGCTGG CAACGGAGTACCCGTGGGGTGAGCAATGCATAGCTCTGTTGCGTGTAAAG CACCTTTGGTCAAAGTGTTGCCGTGCGGCTCTGCCGTGCGCGTGGTTTTG TCATCCTCTGGTGCTGACTACTTTAAGTGGGCCTTCATCGAGCTTCCCAC TACTGTGTGCGTGCGTGCGTGCGTGCGTGCGTGGCTCGCTCATCTCAGGG GTATTTCCACGCCGT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1618:2220..8184-

>mRNA_E-fasciculatus_F_contig1618.4211.1 ID=mRNA_E-fasciculatus_F_contig1618.4211.1|Name=mRNA_E-fasciculatus_F_contig1618.4211.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2214bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1618:2220..8184- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTGGTCGCTGTAGCAAGGACGCTCGCGGCGGGGGTGGCCCTGGCCCT
GGCGACAAGGGCGCGAGGCTTCGTGGCGCCAGCAGCAGTAACGACGATGT
CGGGAGCCCGACCTTGCAGCAGTAGATGGCCCTGCTCAAGGACACAGTCG
TCGGCGCAGCAGCAGCAGCAGCAGCAGAAGCAGCAGCAAGGTGTCGCGTT
TGCACCAACTTCGCAGTTTCTTGGCTGCGCGAGCCGTGGTCGGCGACGAA
TAGCGGCGCAAGGGTGCGCCCCCTCTGCTGGCTGTACCGCTGCCGCTGGT
GCGGTTTCAACAACGCCCACGACGATGGGGCTGCGGGTTCTGGCGCCCGG
GGGCGGGCGGCGCCTAGCCTTCGCGGCTATGGCCAACGCGGCCGCGTTCG
CGGCGGTGGGAGATGGTGGTCGCTGTAGCAAGGACGCTCGCGGCGGGGGT
GGCCCTGGCCCTGGCGACAAGGGCGCGAGGCTTCGTGGCGCCAGCAGCAG
TAACGACGATGTCGGGAGCCCGACCTTGCAGCAGTAGATGGCCCTGCTCA
AGGACACAGTCGTCGGCGCAGCAGCAGCAGCAGCAGCAGAAGCAGCAGCA
AGGTGTCGCGTTTGCACCAACTTCGCAGTTTCTTGGCTGCGCGAGCCGTG
GTCGGCGACGAATAGCGGCGCAAGGGTGCGCCCCCTCTGCTGGCTGTACC
GCTGCCGCTGGTGCGGTTTCAACAACGCCCACGACGATGGGGCTGCGGGT
TCTGGCGCCCGGGGGCGGGCGGCGCCTAGCCTTCGCGGCTATGGCCAACG
CGGCCGCGTTCGCGGCGGTGGGAGGTGGGGTGCTAGCGGGGGGGCTGCAC
GCAGTGTCTGGACCCGACCACCTGGCCGCGCTGCTGCCGCGCATCATGGG
GCAGAAGTGGCACAAGTCGATGAGAATCGGAGCCACGTGGGGACTCGGCC
ACGGCTTCAGCGCCACGGTCATCGGGCTTGCGGTGGGGTGCTAGCGGGGG
GGCTGCACGCAGTGTCTGGACCCGACCACCTGGCCGCGCTGCTGCCGCGC
ATCATGGGGCAGAAGTGGCACAAGTCGATGAGAATCGGAGCCACGTGGGG
ACTCGGCCACGGCTTCAGCGCCACGGTCATCGGGCTTGCGGCGTTTTTCT
TCAAGGACCGGCTGGGGCTCGGGCACAACGAGCGGCTCGTGGCCATGATG
GGCAGCTGGACGGAGGGCCTGGTCGGCGTCTCCCTCATCGCCATCGGACT
CCTGGGCCTCAAGGAATCCCTCCTGGACTACGAAGAAACCCCCGCCTTCG
AGGCGAAGAGCGCCGGCAGCGCGGTCGTGGAGGGGGGCGGCACGCCGGGG
GCCGGGGTGGGCATGACTAAGAGCGGCGGCGGGGAGAGGGCCATCTTCTT
TAACGGCGTTCTTCACGGGTTCTCTTGGGACGGGGCCCCGAGCCTGGCGC
CGGCGCTCGCGCTGTCGTCGTGGGGTAGCGTGCTGTGGTTCCTGCTGGCC
TACTGCTCGGGGACGATGGCGTTTTTCTTCAAGGACCGGCTGGGGCTCGG
GCACAACGAGCGGCTCGTGGCCATGATGGGCAGCTGGACGGAGGGCCTGG
TCGGCGTCTCCCTCATCGCCATCGGACTCCTGGGCCTCAAGGAATCCCTC
CTGGACTACGAAGAAACCCCCGCCTTCGAGGCGAAGAGCGCCGGCAGCGC
GGTCGTGGAGGGGGGCGGCACGCCGGGGGCCGGGGTGGGCATGACTAAGA
GCGGCGGCGGGGAGAGGGCCATCTTCTTTAACGGCGTTCTTCACGGGTTC
TCTTGGGACGGGGCCCCGAGCCTGGCGCCGGCGCTCGCGCTGTCGTCGTG
GGGTAGCGTGCTGTGGTTCCTGCTGGCCTACTGCTCGGGGACGATGGTGG
CCATGTCGGCGACCACCACCTTGATCGGAGAGGGTAGCGTAAGAGTCGGC
AAGGCCTTGGACCAGCCGGACATACCGAGGAAGCTGTCGGTGGTTTCGTC
GTTCGTGGCCATCACCATTGGTGCCGTTTGGCTGGCGAAGGCGGTGTTCT
TTTAGGTGGCCATGTCGGCGACCACCACCTTGATCGGAGAGGGTAGCGTA
AGAGTCGGCAAGGCCTTGGACCAGCCGGACATACCGAGGAAGCTGTCGGT
GGTTTCGTCGTTCGTGGCCATCACCATTGGTGCCGTTTGGCTGGCGAAGG
CGGTGTTCTTTTAG
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