mRNA_E-fasciculatus_F_contig16150.4197.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE) HSP 1 Score: 337 bits (864), Expect = 3.980e-114 Identity = 169/197 (85.79%), Postives = 177/197 (89.85%), Query Frame = 1
Query: 1 TLETALAGSPLLGKINGGVRGDKDGRREGELMGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQGVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEQRQRVD 591
TLETALAGS KINGG GDKDGRRE +L+GHFDA+ERVVLTANANLQRVISSYYNSPVTVDVIFCTEV GVY+REVEIS+LGHVFCVAKSLVVVH+PACAEAVKTGRVGLGQLFHSLNILP FELLNAGRRVGRS RF G DTI GEKE T +DGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEQ +RVD
Sbjct: 138 TLETALAGSLFFRKINGGRGGDKDGRREEDLIGHFDALERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFSGNSDTIGGEKEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEQGKRVD 334
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: D8LJX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX8_ECTSI) HSP 1 Score: 180 bits (456), Expect = 3.190e-55 Identity = 86/101 (85.15%), Postives = 90/101 (89.11%), Query Frame = 1
Query: 289 VVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLEQRQRVD 591
VVH+ ACAEAVKTGRVGLGQLFHSLNILP FELLNAGRRVGRS RF G DTI GEKE TGE+GGFWRLYDLRSGHVSCRIYEEFPPDLFGL+Q +RVD
Sbjct: 18 VVHDAACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFPGNSDTIGGEKEGGCTGEEGGFWRLYDLRSGHVSCRIYEEFPPDLFGLDQGKRVD 118
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.100e-38 Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 91 LMGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQGVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 570
++ F MERVVLTAN NLQR+ISSYYN+PV V + C + VYER V +S+ G FC AKS+VV+H+ AC EAV+T VG+GQLF L+ LP+F LL+ G+ + T G T G WR+YDL S H+SCRI E+F +LF +
Sbjct: 119 ILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSP-----SSQTDTGASP---TSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: W7TDI1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI1_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.590e-35 Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 1
Query: 16 LAGSPLLGKINGGVR---GDKDGRREGELMGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQGVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRS-GHVSCRIYEEFPPDLF 564
L + + G G+ G KD E L F +ERV L+A +LQR+ISSY+NS VTV + C E+E GV++REV++S++GHVFC A S + P CA ++ VGLGQLF L + P+F LL+ VGR+E G + G +E E GGFWR+Y+L G ++CRI E F + F
Sbjct: 99 LKETAMYGNFRSGISERVGSKD--VEIRLPESFSPLERVALSAEGDLQRIISSYHNSAVTVRIKRCLEIEPGVFDREVDLSVMGHVFCTATSSLSARTPECAHLLREKSVGLGQLFRHLRVYPTFRLLD----VGRTEVEDGEERDVEGLRERE---GGGGFWRVYELDCPGMINCRILERFSSNTF 276
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A7S2L0C0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L0C0_9STRA) HSP 1 Score: 134 bits (337), Expect = 6.720e-35 Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 103 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQ-------GVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 570
F A++R+ LTAN NLQR++SS+Y+SPVTV V C E + GV++R V++ + FC A S + VH P CAE V++G VGLGQLF L+ LP+F+LL+AGR E GG WRLY+L+S ++C I+E+F PD++ +
Sbjct: 162 FSALDRIALTANGNLQRIVSSFYDSPVTVVVNSCVERPRLCASENAGVWDRSVDLKVYNKRFCRATSEITVHEPMCAELVRSGEVGLGQLFRYLDKLPTFDLLDAGRT------------------------ESGGMWRLYELKSKELTCSIFEDFSPDVWSM 300
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A0L0HN02_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN02_SPIPD) HSP 1 Score: 118 bits (296), Expect = 6.990e-30 Identity = 68/166 (40.96%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 103 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQ---------GVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLE 573
F MER++LTAN N+QR++S+YYNS V+VD+I + + V+ REV + L + C AKS V + +P + +VG+GQLF LNILP FELL GR T+N FWR YDLRS V+CRI EEFP +F L+
Sbjct: 50 FSPMERILLTANGNVQRILSAYYNSTVSVDIIHNELINEESASNAETESVFRREVNLRCLNQICCNAKSTVTITDPEYLRLILEQQVGIGQLFRYLNILPEFELLQVGR-------------TVN------------SFWREYDLRSNGVNCRIREEFPLGVFNLQ 190
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A0L0FYY7_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FYY7_9EUKA) HSP 1 Score: 116 bits (291), Expect = 6.930e-29 Identity = 75/188 (39.89%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 10 TALAGSPLLGKINGGVRGDKDGRREGELMGHFDAMERVVLTANANLQRVISSYYNSPVTVDVIFCT-EVEQGVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 570
TAL +P LG + G EL G F +ER+VLTAN LQR+ISSYYN+ VTV + +QG Y+REVE+ I VFC+A S + + + V+ R+GLGQLF LN+LP F LL GR +GG R Y L+S ++CRI E FP LF L
Sbjct: 73 TALKEAPHLGDLMGWRTTFT------ELPGQFTGLERIVLTANGTLQRIISSYYNAEVTVKIRHNRPRTDQGWYDREVELLIFDQVFCIATSEIHLDRKEYVDLVEINRIGLGQLFRHLNLLPFFHLLKVGRNP------------------------EGGLKRTYTLQSPGITCRITETFPRKLFTL 230
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A507D5L9_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D5L9_9FUNG) HSP 1 Score: 112 bits (279), Expect = 9.140e-28 Identity = 65/165 (39.39%), Postives = 86/165 (52.12%), Query Frame = 1
Query: 103 FDAMERVVLTANANLQRVISSYYNSPVTVDVIF---------CTEVEQGVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 570
F ++RV+LTAN N+QR+ISSYYN+PVTVD++ CT ++R V I + HV C A S V ++N V+ VG+GQLF LNILP F L++ GR G G+ GGFWR Y L C I+E FP ++F L
Sbjct: 32 FTPLQRVLLTANGNVQRIISSYYNAPVTVDILLNHKESSTPACTT-----FKRSVNIIVKNHVCCRAVSTVHIYNVEVLRLVEQDCVGIGQLFRYLNILPEFTLVDVGRDDG-------------------VAGDVGGFWRHYILSGNGFKCHIHERFPDNVFNL 172
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A813DD16_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DD16_POLGL) HSP 1 Score: 115 bits (289), Expect = 2.660e-27 Identity = 66/156 (42.31%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 103 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQGVYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 570
F ++R VL AN NLQR++SSY++SPVTV V F G YEREV++S+ G +F V S VV+ C A++ VG+GQLF LNI+P+F LL AG+ +E T +G + + FWR Y L V C I E DLF L
Sbjct: 55 FSPLQRTVLFANGNLQRILSSYHDSPVTVTVRFNRRKAHGSYEREVDLSVFGCIFAVCTSSVVLTTEECIRAIEVDGVGIGQLFRHLNIMPAFSLLQAGQLAAAAEESP----TTSGPQA---LDSEARFWREYQLSGLGVQCTIREVLRSDLFEL 203
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Match: A0A139AYU2_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AYU2_GONPJ) HSP 1 Score: 110 bits (274), Expect = 8.450e-27 Identity = 65/174 (37.36%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 103 FDAMERVVLTANANLQRVISSYYNSPVTVDVIFCTEVEQG------------------VYEREVEISILGHVFCVAKSLVVVHNPACAEAVKTGRVGLGQLFHSLNILPSFELLNAGRRVGRSERFQGTRDTINGEKEEEYTGEDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 570
F +ER++LTAN N+QR++S+YYNSPV+V ++ +++ V++REV I LG V C A S V + N C V +VG+GQLF LN+LPSF LLN GR G+ FWR Y L S V C I EEFP +F
Sbjct: 42 FSPLERILLTANGNVQRILSAYYNSPVSVVIVRNRKIDGASNHVPPPGITSKPKNALAVFDREVRIECLGQVCCKAVSTVKILNDECLRLVDEQKVGIGQLFRYLNVLPSFALLNCGRSTGQ-------------------------FWRDYALTSEGVRCEIREEFPDGVFNF 190 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16150.4197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16150.4197.1 >prot_E-fasciculatus_F_contig16150.4197.1 ID=prot_E-fasciculatus_F_contig16150.4197.1|Name=mRNA_E-fasciculatus_F_contig16150.4197.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=198bp TLETALAGSPLLGKINGGVRGDKDGRREGELMGHFDAMERVVLTANANLQback to top mRNA from alignment at E-fasciculatus_F_contig16150:752..2691- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16150.4197.1 ID=mRNA_E-fasciculatus_F_contig16150.4197.1|Name=mRNA_E-fasciculatus_F_contig16150.4197.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1940bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16150:752..2691- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16150:752..2691- >mRNA_E-fasciculatus_F_contig16150.4197.1 ID=mRNA_E-fasciculatus_F_contig16150.4197.1|Name=mRNA_E-fasciculatus_F_contig16150.4197.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1188bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16150:752..2691- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |