mRNA_E-fasciculatus_F_contig16115.4185.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: A0A6H5JD70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD70_9PHAE) HSP 1 Score: 373 bits (958), Expect = 2.820e-123 Identity = 194/210 (92.38%), Postives = 199/210 (94.76%), Query Frame = 1
Query: 25 EDYDSGVELPGDGKRGAGGKQDGAGGGLGAITPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVFLV 654
+DYDS VELP DGK GAGGKQ GAGG LGA+TPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSV EVG+LMAVLGMVVLPVNALVGRMS SCEDRVMLQVL VFAGIGCLV+VDF+ SPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIP ELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSV LV
Sbjct: 466 DDYDSEVELPRDGKSGAGGKQGGAGGSLGAVTPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVREVGMLMAVLGMVVLPVNALVGRMSMSCEDRVMLQVLAVFAGIGCLVMVDFAASPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPVELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVVLV 675
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: D8LS38_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS38_ECTSI) HSP 1 Score: 298 bits (762), Expect = 1.920e-93 Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 1
Query: 172 EMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVFLV 654
+MVVSSAPVLTQYRFDWSV EVG+LMAVLGMVVLPVNALVGRMS SCEDRVMLQVL VFAGIGCLVIVDFS+SPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIP ELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVFLV
Sbjct: 570 KMVVSSAPVLTQYRFDWSVREVGMLMAVLGMVVLPVNALVGRMSMSCEDRVMLQVLAVFAGIGCLVIVDFSMSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPAELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVFLV 730
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: A0A835YJ60_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ60_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.310e-58 Identity = 104/175 (59.43%), Postives = 130/175 (74.29%), Query Frame = 1
Query: 124 PLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDF--SLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPS 642
PL FCLF YF+NKLITE +VSSAP++T + FDW ++EVG+LMA +G+V LPV+ VGR+SR EDR ++Q L F +GC +++ L YT QYV G+ +AFVA+QAHEGV+M ITSKIIP LA+GT+NSGFLATEAGT GRF+GD ITV GVMT+ L LLF P
Sbjct: 669 PLLFCLFSYFINKLITEAIVSSAPLVTLHHFDWRISEVGMLMAAMGLVTLPVSVGVGRLSRMFEDRALMQSLNAFTALGCTIVMTAPNDLLGEPYTLTQYVLGIGVAFVALQAHEGVVMGITSKIIPAHLARGTFNSGFLATEAGTSGRFMGDIAITVFGVMTIDQLLNLLFIPG 843
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: A0A7S2UUG0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUG0_9STRA) HSP 1 Score: 160 bits (406), Expect = 8.270e-42 Identity = 87/179 (48.60%), Postives = 122/179 (68.16%), Query Frame = 1
Query: 115 ITPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVFL 651
I+ P+ L YF NK+ +E+VV+S+ ++T + F W VAEV +L+ VLG V+LP N LVG++S+S EDR +L VLG +G +V+V Y+E Y+AG + FVA QAHEGV+MS SKII PE+A+G +NSG LATE+GTFGR VGD L++ + V+T ++F PS+ L
Sbjct: 896 ISWPIVVLLLFYFANKMTSELVVNSSALITAHLFGWGVAEVSVLLIVLGAVILPTNLLVGKLSQSIEDRRLLVVLGGCVIVGLVVVVKAWPG---YSEAHYLAGCIITFVAAQAHEGVLMSELSKIISPEMARGAFNSGLLATESGTFGRAVGDFLLSAVAVLTDLEPCAVVFLPSLIL 1071
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: A0A7S2AS13_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AS13_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.480e-39 Identity = 72/160 (45.00%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 118 TPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLG 597
+PP+ L YFVNKL+ E +++SA V T+ FDW+ ++ G +A + + VLP N L+GR R D+ M F IG LVI+ +++ YT QY+ G LAF+A+Q +EGV M++ +K +PP+LAKGT NSG LATEAGT GR +GD + + G
Sbjct: 47 SPPVMLVLAMYFVNKLVVEQILTSASVFTEAAFDWTSSKAGFALAAISLSVLPTNLLIGRAGREVPDQTMFLATEAFILIGSLVIIVYNID--GYTVPQYLIGFVLAFIALQVNEGVAMALLAKSMPPKLAKGTCNSGLLATEAGTLGRAIGDFYVALAG 204
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: B8C841_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C841_THAPS) HSP 1 Score: 139 bits (349), Expect = 6.920e-35 Identity = 74/177 (41.81%), Postives = 110/177 (62.15%), Query Frame = 1
Query: 115 ITPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGC-LVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPS 642
+T P+ C+F F E V+S+A ++T+ R+ W+V +VG L ++G + +P++ +G +S+ CEDRV++ L FA +G L+ ++ P RY +AG L F ++QA +GV+ S+ SK+IP LA GTWNSGFLAT GTFGR GD IT +G + L + LLF PS
Sbjct: 308 LTVPVKICMFLLFSKMFTVESVISAASMVTKNRYGWAVQQVGTLGTIVGCLTIPISVFIGWVSKHCEDRVLMIWLMSFAVLGMGLLGSALAVGPRRY-----IAGYLLVFCSVQAFDGVVGSVLSKVIPTALASGTWNSGFLATVVGTFGRACGDVFITSVGYIDLRQIMNLLFVPS 479
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: B8C838_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C838_THAPS) HSP 1 Score: 132 bits (332), Expect = 6.890e-32 Identity = 76/194 (39.18%), Postives = 113/194 (58.25%), Query Frame = 1
Query: 106 LGAITPPLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDF----SLSPFRYTEG--------QYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMTLSSLDFLLFFPSVFL 651
L +T P+ CLF F E V+S+A ++T+ R+ W+V +VG L ++G + +P++ +G +S+ EDRV++ L FA +G ++VD S + EG +Y+AG L F ++QA +GV+ S+ SK+IP LA GT NSG LAT GTFGR GD IT +G + L + LLF PS F+
Sbjct: 963 LNHLTLPVRICLFLLFSKMFTVESVISAASMVTKNRYGWAVQQVGTLGTIVGCLTIPISIFIGWISQYREDRVLMIWLMSFAALGMGLLVDVTDFVSTETDTFNEGSALAVGPRRYIAGYLLVFCSVQAFDGVVGSVLSKVIPTALATGTLNSGLLATVVGTFGRACGDVFITSVGYIDLRQIMNLLFVPSFFI 1156
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: A0A0G4FDS2_VITBC (SPX domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FDS2_VITBC) HSP 1 Score: 131 bits (329), Expect = 1.490e-31 Identity = 77/174 (44.25%), Postives = 108/174 (62.07%), Query Frame = 1
Query: 136 CLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVM-TLSSLDFLLFFPSVFLV 654
CL+ YFV K + E +AP++T Y F WS A VG ++AV+G++V+P N LVG S EDRV Q+ V I C + P + Y+ G FV+ Q EGV M + SK++P EL+KG NSGFL+TEAGTFGR VG+ I+V G++ +++L+ L+ FPS+ LV
Sbjct: 505 CLWVYFVLKGVLEAFQGAAPLVTGYHFGWSDAAVGNMLAVIGIIVIPSNLLVGISSNFMEDRVAQQITMVTLAIACAAASVWV--PAYFNIYIYLLGGLFIFVSAQMLEGVNMGLLSKVMPKELSKGLMNSGFLSTEAGTFGRVVGNCWISVAGLLGPVAALENLILFPSMALV 676
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: M4BRT1_HYAAE (SPX domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRT1_HYAAE) HSP 1 Score: 129 bits (325), Expect = 4.650e-31 Identity = 72/161 (44.72%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 124 PLGFCLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDR--VMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGV 600
P+ LF Y V KL+ E +++++ + Y F+W + G+ +A LG+++ P N +VG MS EDR +ML +F G+G VIV++ YT Q+VAG L F++ EGV MS+ SK IP AKGT+NSG LATEAGTFGR +GD ITV G+
Sbjct: 502 PVVASLFIYIVLKLVLECLITASSTIAMYHFNWGSSTNGMYLAALGLLMFPTNVVVGWMSFRYEDREMMMLSEFAMFIGVG--VIVNYG----HYTVAQFVAGGVLIFISTNVLEGVNMSLLSKTIPRSFAKGTFNSGLLATEAGTFGRAIGDVAITVAGL 656
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Match: A0A0G4ERQ6_VITBC (SPX domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERQ6_VITBC) HSP 1 Score: 129 bits (325), Expect = 5.340e-31 Identity = 71/174 (40.80%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 136 CLFGYFVNKLITEMVVSSAPVLTQYRFDWSVAEVGILMAVLGMVVLPVNALVGRMSRSCEDRVMLQVLGVFAGIGCLVIVDFSLSPFRYTEGQYVAGVSLAFVAMQAHEGVIMSITSKIIPPELAKGTWNSGFLATEAGTFGRFVGDALITVLGVMT-LSSLDFLLFFPSVFLV 654
CL+ YFV KL+ E ++AP++T + F W A VG ++A++G++VLP N VG++S+ DRV + G+G + F L+ +T QY+ G F++ Q EGV M + SK++P ++KG +NSGFL+TEAGTFGR VG+ +I++ G + +S++ L+ PSV LV
Sbjct: 517 CLWVYFVLKLVQEAFQTAAPLVTAHFFGWGDAAVGNMLAIIGLLVLPTNLAVGKLSQMIPDRVGQSISLFLLGLGSAL--TFELNSSSFTVVQYLIGGFTLFISAQVLEGVNMGLLSKVMPKVMSKGLFNSGFLSTEAGTFGRVVGNVMISIAGAVAGEASVNNLVAIPSVVLV 688 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16115.4185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16115.4185.1 >prot_E-fasciculatus_F_contig16115.4185.1 ID=prot_E-fasciculatus_F_contig16115.4185.1|Name=mRNA_E-fasciculatus_F_contig16115.4185.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=218bp GGEEEEEEEDYDSGVELPGDGKRGAGGKQDGAGGGLGAITPPLGFCLFGYback to top mRNA from alignment at E-fasciculatus_F_contig16115:216..2828- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16115.4185.1 ID=mRNA_E-fasciculatus_F_contig16115.4185.1|Name=mRNA_E-fasciculatus_F_contig16115.4185.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2613bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16115:216..2828- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16115:216..2828- >mRNA_E-fasciculatus_F_contig16115.4185.1 ID=mRNA_E-fasciculatus_F_contig16115.4185.1|Name=mRNA_E-fasciculatus_F_contig16115.4185.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1308bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16115:216..2828- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |