mRNA_E-fasciculatus_F_contig1609.4167.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1609.4167.1
Unique NamemRNA_E-fasciculatus_F_contig1609.4167.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: D7FY68_ECTSI (Similar to Mitochondrial ornithine transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY68_ECTSI)

HSP 1 Score: 545 bits (1404), Expect = 5.330e-181
Identity = 299/362 (82.60%), Postives = 312/362 (86.19%), Query Frame = 1 
Query:  412 VRRAPTTLEHLVAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMKRGKRAEEVSSEEQDDRS*REGSRWCDEFERERARIEEGXXXXXXXQV*RKGVMSLSGRGEQ 1497
            VRR PTTLEHLVAGT GGVSGALVSYPLDTVRVRMQTCGK LG A TASMLFQEAG+AGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGT K++EELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSS+PS+SSS+AARAGGGYANAWGCARGLV+EHG RGGLYAGLGPTLLREVPGYA YFATYEACKRVLLG GSGEDSSRG VL KTAVSGALAGIAAWLP YPADVVKSRMQSAG SGAGMISTASVMW+TEGLAPFYRGLSPTIVRAMVNHAATFLVYEASM+FIM+RG+R E  SS        REGS            +E G       QV RKGV     RG+Q
Sbjct:  100 VRRVPTTLEHLVAGTFGGVSGALVSYPLDTVRVRMQTCGKTLGAARTASMLFQEAGMAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGKDNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSSPSASSSLAARAGGGYANAWGCARGLVAEHGLRGGLYAGLGPTLLREVPGYAFYFATYEACKRVLLGNGSGEDSSRGPVLLKTAVSGALAGIAAWLPTYPADVVKSRMQSAGGSGAGMISTASVMWKTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMSFIMRRGRRGEVASSG-------REGSE-----------LEGGE------QVSRKGVYDELERGDQ 437
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A6H5KAN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN8_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 1.080e-148
Identity = 242/266 (90.98%), Postives = 253/266 (95.11%), Query Frame = 1 
Query:  559 MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMKRGKRAEEVSSEEQD 1356
            MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGT K++EELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSS +AARAGGGYANAWGCARGLV+E G R GLYAGLGPTLLREVPGYA YFATYEACKRVLLG+GSGEDSSRG VL KTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMW+TEGLAPFYRGLSPTIVRAMVNHAATFLVYEASM+ IM+RG+  +  SSEE+D
Sbjct:    1 MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGKDNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSPLAARAGGGYANAWGCARGLVAERGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRVLLGKGSGEDSSRGPVLLKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMWKTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMSVIMRRGRSGDVDSSEEKD 266
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A0D2VZ19_CAPO3 (Solute carrier family 25 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ19_CAPO3)

HSP 1 Score: 186 bits (473), Expect = 4.830e-48
Identity = 126/326 (38.65%), Postives = 176/326 (53.99%), Query Frame = 1 
Query:  415 RRAPTTLEHLVAGTVGGVSGALVSYPLDTVRVRMQTC--GKRL--GVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYG-LCQALVRR------GTRKESEELNLVDLG-----VAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQS-------AGASGA------GMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTF 1305
            R AP   +HL+ GTVGG+ G + SYP DTV+VR+QT   G  L  G+      + +  G    Y G+LSP+VG   +KA VFG YG + Q L+ R      G+ +  ++   V L      +A+  +GLV + VVTPVER+KV MQA+               G  + +   C   LV   G  GGL+ G  PT+LREVP Y  YF +Y+  KR     G    +    +L   A++G +AG+ AW+PIYP DV+KSR+Q+       A +SG+      G++  A   +R EGL  F+RGL+PTI RA   HAA FL YE ++ +
Sbjct:   71 RAAPKPAQHLLGGTVGGIMGIVASYPFDTVKVRIQTQPPGSALYTGMVDCFRKIIKSEGALALYSGMLSPVVGVAGVKAVVFGSYGGISQWLLARKQGVVAGSEQPQQQQQPVKLSGFENALASCSAGLVATIVVTPVERVKVSMQAS--------------GGKAFKSTLDCVLSLVRTAGISGGLFKGFVPTVLREVPSYGAYFISYDMAKRAFCQPGQDVSTLSPGLL---ALAGGIAGVMAWVPIYPIDVIKSRIQAQPSSALVAASSGSSSRPYSGVVDCAVRSYRAEGLGVFFRGLTPTIARAFPCHAAVFLGYELTLRY 379
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A830I1W1_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I1W1_9CHLO)

HSP 1 Score: 169 bits (429), Expect = 2.890e-42
Identity = 106/292 (36.30%), Postives = 157/292 (53.77%), Query Frame = 1 
Query:  439 HLVAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALV--RRGTRK-ESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGG--YANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASM 1299
            H V GT+GG+ G  VSYP DTV+VRMQT G    + G  + + +  G+A FYRGV++P+   GIIKA  FG YG C  +   ++GT   E  + +  ++ +A   +G   +FV+ P + IK+ MQA                GGG  Y N+W CA+ L+ E G    L+ G G T+ R+ P    Y+  Y+  K+ +    +    +   ++F    +GALAG ++WLP+YP DV+KSR+Q  G    GM+  A    + +G    YRGL P ++ +M  H   F+VYE  M
Sbjct:  102 HFVGGTLGGMCGVAVSYPFDTVKVRMQT-GAFNSMVGAFTHVAKNEGMASFYRGVMAPLSAYGIIKAITFGTYGNCLDIFAGQKGTSMAEGYKPSYTEIALAGFAAGFTSTFVMAPSDSIKIAMQAG-------------SIGGGTQYKNSWECAKHLIKERGVAE-LFRGTGATMARDAPSMGLYYIVYDVTKKAMPPAKADGRHAPWQMMF----AGALAGASSWLPVYPFDVLKSRLQQPGNDYKGMVDCAVRTVKADGPLALYRGLGPVLMGSMPLHGTVFMVYELFM 374
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A8H3QM81_9GLOM (Mitochondrial carrier n=7 Tax=Rhizophagus TaxID=1129544 RepID=A0A8H3QM81_9GLOM)

HSP 1 Score: 156 bits (395), Expect = 1.300e-38
Identity = 101/296 (34.12%), Postives = 154/296 (52.03%), Query Frame = 1 
Query:  436 EHLVAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMI---STASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMK 1314
            E  VAG   G+S   V  PLDT++VR+Q   +  G         +  G    Y+G+ SP+VG G + A +F  Y   +A+         E+L L  + +A  G+G + S + +PVE +K+ MQA    +  +S  I       Y     C++ L+ E G R GL+ G   T+ RE+P YA +++ +E  KR L   GS  DS   T L    ++G+L G A WL  YP DVVKS++Q+      G+    +T S +++ EG   F RG++PTI+R++    +TF VYE +M  + K
Sbjct:   18 EDFVAGNFAGMSQVFVGQPLDTIKVRLQVESRFKGPMDCFIQTIKNEGFFALYKGMASPLVGIGAVNALLFAAYSRLKAIQ---ATFPGEQLALYKIAIAGAGAGAINSVLASPVELLKIKMQAQYGRSAGNSGLI-------YKGPIDCSKQLIKEFGIRNGLFRGFWATVAREIPAYAGFYSGFEFAKRKLTSEGSSPDSLSPTKLM---LAGSLGGCAYWLCCYPFDVVKSKVQNQKNPPKGIFYVFTTISSIYKNEGARAFTRGITPTILRSIPAAGSTFTVYELTMRMLEK 300
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A397TRM4_9GLOM (Mitochondrial carrier n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TRM4_9GLOM)

HSP 1 Score: 156 bits (394), Expect = 1.770e-38
Identity = 99/293 (33.79%), Postives = 157/293 (53.58%), Query Frame = 1 
Query:  445 VAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMI---STASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMK 1314
            VAG   G+S  +V  PLDT++VR+Q   +  G         +  G    Y+G+ SP+VG G + A +F  Y   +++    T   +E+L L  + +A  G+G + S + +PVE +K+ MQA   +   SS  I       Y     CA+ L+SE G R GL+ G   T+ RE+P YA +++ +E  KR L   GS  DS   + L    ++G+  G + W+  YP DVVKS++Q+      G++   +T + +++ EG   F RG+SPTI+R++    +TF VYE +M  + K
Sbjct:   21 VAGNFAGMSQVIVGQPLDTIKVRLQVESRFKGPMDCFIQTVKHEGFFALYKGMASPLVGIGAVNALLFAAYSRLKSIQ---TTSLNEQLALYKIAIAGAGAGAINSVLSSPVELLKIKMQAQYGATAGSSGLI-------YKGPIDCAKHLISEFGIRNGLFRGFWATVTREIPAYAGFYSGFEFAKRKLTSEGSSPDSLPPSKLM---LAGSFGGFSYWICCYPFDVVKSKVQNHKNPPKGILYVFTTINSIYKNEGARAFTRGISPTILRSLPAAGSTFTVYELTMRILEK 300
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A6G1I2Y6_9PEZI (Mitochondrial carrier n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I2Y6_9PEZI)

HSP 1 Score: 155 bits (392), Expect = 8.080e-38
Identity = 105/296 (35.47%), Postives = 152/296 (51.35%), Query Frame = 1 
Query:  427 TTLEHLVAGTVGGVSGALVSYPLDTVRVRMQTC--GKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAA-----LSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMIS-TASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYE 1290
            ++L  LVAG VGGV   L  +P D V+V MQT   G   G       +   AG  G Y GV +P+ G   + A  F GY + ++LV+R +  E+  L++     A   S +  + +  P+ER+KV++Q          AP             YA +  CA+ L+ E G R  LY G   TL R+ PG A YFA YE  KR L  +    + + G  L    V+GA AG+A W+P++P D +KSR+QSA  SG+  I      +W++ G+  F+ G+ P + RA+  +AATFL  E
Sbjct:   46 SSLRSLVAGGVGGVCAVLTGHPFDLVKVHMQTAEKGAHKGALDITRKIIARAGPTGLYAGVTAPLYGVTPMFAISFWGYDVGKSLVKRFSVVENNSLSIAQTSAAGFFSAIPMTIITAPMERVKVLLQIQGQHLKPGEAPK------------YAGSADCAKQLLREGGIRS-LYRGTFMTLARDGPGSAAYFAAYEGVKRALTPKDEAGNPTGGLSLTAITVAGATAGVAMWIPVFPVDTIKSRIQSA--SGSPTIGGVVGQLWKSGGIRAFFPGIGPALARAVPANAATFLGVE 326
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A1X2HFQ1_SYNRA (Mitochondrial carrier n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HFQ1_SYNRA)

HSP 1 Score: 153 bits (387), Expect = 1.130e-37
Identity = 102/307 (33.22%), Postives = 161/307 (52.44%), Query Frame = 1 
Query:  415 RRAPTTLEHLVAGTVGGVSGALVSYPLDTVRVRMQ--TCGKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTA---SVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMKRG 1320
            +  P+     VAG + G++  LV  P+DT++VR+Q  T  +  G    A+   ++ GV   Y+G+ SP++G G + A +F  Y  C+  ++       E L+L  + VA  G+G+V S + +PVE +K+ +QA                GG ++   GCA+ L+ + G   GL+ G+  T+LRE+P YA ++  +EA KR L   G  E+++    + +   SGA+ G+A WL  YP DVVKS +Q+      G+ +T     ++ R EG     RGL P +VR++    ATF  YE SM  I   G
Sbjct:    3 KHQPSAAADFVAGNISGMANVLVGQPIDTIKVRLQLDTANRFRGGWDCAAQTIKQEGVLALYKGMASPLIGIGAVNALLFAAYSACKKAMQT---HPGEVLSLPQIAVAGAGAGIVNSILASPVELLKIRLQAQYGK------------GGEFSGPIGCAKYLIRKDGIAHGLFRGMYATVLREIPAYAGFYGGFEATKRYLT-HGQLEEAT----ITQLMASGAVGGMAYWLTSYPFDVVKSVVQNQDKPPRGLYATQVMKEIVVR-EGYQGLVRGLGPAVVRSIPAAGATFTAYELSMRAIESSG 288
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: A0A7S1GME1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME1_CYCTE)

HSP 1 Score: 152 bits (385), Expect = 2.450e-37
Identity = 98/299 (32.78%), Postives = 158/299 (52.84%), Query Frame = 1 
Query:  415 RRAPTTLEHLVAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTASMLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAG-ASGAGMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFI 1308
            +R  ++++ L++G VGG+   LV YP D V+VR+QT      +      + +  G+ GFYRG+ +P+VG   I +  F G+   + +VR    KE  +L++  L VA++GS    + V+TP +R+KV+MQ   ++               YAN+W CAR L  E G +  LY G   TL R++PG+  YF  YE  K  L+     +  S+    F    +G L G+A+W  + PAD +KSR+Q+A   +  G+      + R EG A  ++G  P ++RA ++++  F   E +  FI
Sbjct:    9 KRQDSSVKSLLSGGVGGMCSVLVGYPFDLVKVRIQT-NSGDSILFVMRQVMRNEGIVGFYRGLAAPLVGVLPIGSFSFWGFDTGKRVVRSWVGKE--DLSVGQLCVASLGSAFATTLVITPSDRVKVLMQTQHTTMK-------------YANSWDCARQLYKEGGIQS-LYKGTVATLFRDIPGFMAYFVVYELTKGELMRLQGIDPKSQTLSPFSILAAGGLGGVASWTVMMPADTIKSRLQTAPEGTYTGLFDVYQKLMRKEGPAALFKGTRPALIRAFLSNSVCFFGMEVAKEFI 290
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Match: F0YBX9_AURAN (ZZ-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBX9_AURAN)

HSP 1 Score: 164 bits (415), Expect = 3.430e-37
Identity = 116/306 (37.91%), Postives = 155/306 (50.65%), Query Frame = 1 
Query:  442 LVAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTAS--------MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELNL--VDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGGYANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVLLGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQS---AGASGAGMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMKRG 1320
            L AG +GG  G  V+YPLDT++V++QT   R    G  +         +  E GVA FY GVL  M G  +IK  VF    L     +R     +  L    V L +AA  SG  G FV TPVER+KVVMQA  +  P +                 C R ++++ G  G L  GLG TL RE+P Y  YF+ YE     L G       S    L    + GA AG A+W+P+YP DVVK+ +QS   A   GAG +  A  ++R  G+  F+ G+SP + RA+VNHA TFLV+E + +  +  G
Sbjct: 1493 LAAGCLGGSIGVGVAYPLDTIKVKIQTYNSRALADGGGAPRKRNVIRSVLDEEGVAAFYAGVLPTMAGQALIKGVVF----LVYDSAKRFFAPAACGLTSCGVGLALAACASGAAGGFVCTPVERLKVVMQAGYAGGPLA-----------------CFRDIIAQDGVSGLLTRGLGATLAREIPAYFFYFSAYEVVSGALAG-------SVPAALIPL-LGGATAGAASWVPVYPIDVVKTAVQSETGAAGDGAGALDVARALYRQGGVGVFWDGISPKLARAVVNHAVTFLVFEQTCSLWLAAG 1769
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1609.4167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY68_ECTSI5.330e-18182.60Similar to Mitochondrial ornithine transporter 1 n... [more]
A0A6H5KAN8_9PHAE1.080e-14890.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D2VZ19_CAPO34.830e-4838.65Solute carrier family 25 n=2 Tax=Capsaspora owczar... [more]
A0A830I1W1_9CHLO2.890e-4236.30Uncharacterized protein n=2 Tax=Pycnococcus provas... [more]
A0A8H3QM81_9GLOM1.300e-3834.12Mitochondrial carrier n=7 Tax=Rhizophagus TaxID=11... [more]
A0A397TRM4_9GLOM1.770e-3833.79Mitochondrial carrier n=1 Tax=Glomus cerebriforme ... [more]
A0A6G1I2Y6_9PEZI8.080e-3835.47Mitochondrial carrier n=1 Tax=Trichodelitschia bis... [more]
A0A1X2HFQ1_SYNRA1.130e-3733.22Mitochondrial carrier n=1 Tax=Syncephalastrum race... [more]
A0A7S1GME1_CYCTE2.450e-3732.78Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F0YBX9_AURAN3.430e-3737.91ZZ-type domain-containing protein n=1 Tax=Aureococ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1609contigE-fasciculatus_F_contig1609:4248..13613 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score550.4
Seed ortholog evalue7.1e-154
Seed eggNOG ortholog2880.D7FY68
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0758@1,KOG0758@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-24_003600.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categorysignal peptide
Exons8
Model size3374
Cds size1254
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1609.4167.1prot_E-fasciculatus_F_contig1609.4167.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1609 5865..11607 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928076.0200667-UTR-E-fasciculatus_F_contig1609:4247..43581622928076.0200667-UTR-E-fasciculatus_F_contig1609:4247..4358Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 4248..4358 +
1695995813.3914046-UTR-E-fasciculatus_F_contig1609:4247..43581695995813.3914046-UTR-E-fasciculatus_F_contig1609:4247..4358Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 4248..4358 +
1622928076.035747-UTR-E-fasciculatus_F_contig1609:5861..58641622928076.035747-UTR-E-fasciculatus_F_contig1609:5861..5864Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 5862..5864 +
1695995813.403778-UTR-E-fasciculatus_F_contig1609:5861..58641695995813.403778-UTR-E-fasciculatus_F_contig1609:5861..5864Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 5862..5864 +
1622928076.1507182-UTR-E-fasciculatus_F_contig1609:11607..136131622928076.1507182-UTR-E-fasciculatus_F_contig1609:11607..13613Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 11608..13613 +
1695995813.4800813-UTR-E-fasciculatus_F_contig1609:11607..136131695995813.4800813-UTR-E-fasciculatus_F_contig1609:11607..13613Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1609 11608..13613 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928076.0517218-CDS-E-fasciculatus_F_contig1609:5864..60711622928076.0517218-CDS-E-fasciculatus_F_contig1609:5864..6071Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 5865..6071 +
1695995813.413195-CDS-E-fasciculatus_F_contig1609:5864..60711695995813.413195-CDS-E-fasciculatus_F_contig1609:5864..6071Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 5865..6071 +
1622928076.0684295-CDS-E-fasciculatus_F_contig1609:6846..70371622928076.0684295-CDS-E-fasciculatus_F_contig1609:6846..7037Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 6847..7037 +
1695995813.4225106-CDS-E-fasciculatus_F_contig1609:6846..70371695995813.4225106-CDS-E-fasciculatus_F_contig1609:6846..7037Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 6847..7037 +
1622928076.0826836-CDS-E-fasciculatus_F_contig1609:7692..78771622928076.0826836-CDS-E-fasciculatus_F_contig1609:7692..7877Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 7693..7877 +
1695995813.4315314-CDS-E-fasciculatus_F_contig1609:7692..78771695995813.4315314-CDS-E-fasciculatus_F_contig1609:7692..7877Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 7693..7877 +
1622928076.0990474-CDS-E-fasciculatus_F_contig1609:9397..94921622928076.0990474-CDS-E-fasciculatus_F_contig1609:9397..9492Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 9398..9492 +
1695995813.4437265-CDS-E-fasciculatus_F_contig1609:9397..94921695995813.4437265-CDS-E-fasciculatus_F_contig1609:9397..9492Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 9398..9492 +
1622928076.1112049-CDS-E-fasciculatus_F_contig1609:9945..101211622928076.1112049-CDS-E-fasciculatus_F_contig1609:9945..10121Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 9946..10121 +
1695995813.452715-CDS-E-fasciculatus_F_contig1609:9945..101211695995813.452715-CDS-E-fasciculatus_F_contig1609:9945..10121Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 9946..10121 +
1622928076.1241226-CDS-E-fasciculatus_F_contig1609:10700..108521622928076.1241226-CDS-E-fasciculatus_F_contig1609:10700..10852Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 10701..10852 +
1695995813.4613643-CDS-E-fasciculatus_F_contig1609:10700..108521695995813.4613643-CDS-E-fasciculatus_F_contig1609:10700..10852Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 10701..10852 +
1622928076.1350732-CDS-E-fasciculatus_F_contig1609:11359..116071622928076.1350732-CDS-E-fasciculatus_F_contig1609:11359..11607Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 11360..11607 +
1695995813.4696841-CDS-E-fasciculatus_F_contig1609:11359..116071695995813.4696841-CDS-E-fasciculatus_F_contig1609:11359..11607Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1609 11360..11607 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1609.4167.1

>prot_E-fasciculatus_F_contig1609.4167.1 ID=prot_E-fasciculatus_F_contig1609.4167.1|Name=mRNA_E-fasciculatus_F_contig1609.4167.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=418bp
MSPTQLLAGARQRRIKRRRTCRTTFLAAVVLAVAVLGLQPAVAAAGAVAT
AERKEDVVLAAATLAAFQERRAGGEERTSTAAGNNELRKRSTEKTSPPPV
RRAPTTLEHLVAGTVGGVSGALVSYPLDTVRVRMQTCGKRLGVAGTASML
FQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTRKESEELN
LVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSSIAARAGGG
YANAWGCARGLVSEHGFRGGLYAGLGPTLLREVPGYACYFATYEACKRVL
LGRGSGEDSSRGTVLFKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASG
AGMISTASVMWRTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMTFIMK
RGKRAEEVSSEEQDDRS*
back to top

mRNA from alignment at E-fasciculatus_F_contig1609:4248..13613+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1609.4167.1 ID=mRNA_E-fasciculatus_F_contig1609.4167.1|Name=mRNA_E-fasciculatus_F_contig1609.4167.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9366bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1609:4248..13613+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGGGCGTACAGAGTAGCTGTTCGCGCATTGCCAGGTTTCGCTCGCACAAG
GAAGCAGAGAAGGGGCCCAGCGCGAGTGGGGGGACGCCGTCCACAGCCCC
ATCCTTCTGTGGTTAGTACTGTACCGAGTTCCGACATTTAGCGCGTCTTT
TTGTGTTCCCAAGCAAGCATGTGCCGTAGCTGCCTACGATGGGTGCATGT
TACAACAGAACAGCAGTACCTCCCGACCCCATTAGCTTCAAGGACTCCGT
GCGCATGAAGGCACCCCGCTCCTGATACCAGCGATTCGAGCCTGGCTTGT
CTTTGGTTTGGCAGCTATGGGACGTTACCATTGCTTTGTAGCCAAGACGA
GTTCTACTTCTATTGAGTTGCCCTTTGCACGTTGCCCAACGGGATGCCAC
CTTCTTCATGTATGGTTTGATGTTCGATGGGTACAGCAAGTGCAACTCCA
AGTCAACACAGACCACCGAACGGTTTTCATGTCTAGTCTCACGACGTGGA
CACCGCCAGAGGTGTTTCAGCTGGCGCTCGGAATCCCCGTCAACCTGTGC
CTTCTGACGAACGAAGCCTCTTGTTTTTTGTGTTACGGAAATGCCCTGGT
ATTCCCGCAGCTGCTGCTGTATCTACCACGCACTACAACGGCAGTACTTT
GGCCTTTACAATAGCCTGAACATTTATTTGTGAAACCACTCGCTGGTCGC
TCAGCGTGCACACGCAGCGCGGTACTCCCTTCGTATTCGCGACTCAACCT
TGCAATTTTCGGACACACACACGCCGGTGCACCCCACCCGTAGAGTAGGC
GGTACTGCAGCAACGTAGTAGTCTTTAGGGTGCTGCCGCGTATCATCAAA
ATGTCGGCCCAATTCCCTGGAGAACCACAGAGAATTGATGACCCCTCGAG
AGATACCATACCATCCACCGAGCTGTTATATTTCTACCCCACCTATGTAC
CAAAGTGTAACGTTTCTGCCGTACACAGCAGTATCGACATATGTCTAAAG
GGCAAGGCTTTCTGCCCACACGAGACCTTCGTTTCCTCGCATTGAAGAGC
GCGCAGCGAACAGAGGTCAGGACGGTTTTGAACGTGTAGGCTACGAAGAC
AGCCCAACAACAAGAAGCCTACCTACATTGCACTGTGTGTATGTAGTGTA
GTGTTGGGACCAACAGAACGCCGGTCATGTCCCGTTGCAGAGCAGACTGC
CGCGTCTACGACTGCCGTTGAACGCGTGGACATATTCATGCATGACTTCA
TCCGATTGCTACGGCAGTCGCTCTGAAGGCAACGGAAGAAATTTGGCAGC
GATCCGTGTGCTATTATCGTACAATACCACGCTAGCGACTGCAGAACCTG
TACCGAACGGCTGTCTACCTGCACACACAGCTTGTTATGTACCACCCTTT
CATACAGCACCAGTGGCCTACAAAAGAGTCTCTACGACACAACCATAGGG
CATGTGCATTGGTGGATCGTTCTGCGGCTTTACTATACACAAATCATGCG
GTTTGTTTTTTGCATATGTCTGCTGGACTGCTGCACACACTGCTGCTGCT
ATCTAGATGTCTCTCGACCCCGTAGATCACAATATCCACAGGCTCGTTTT
CTTGTGTTCCGCAGGAGATGTCTCCGACGCAGCTGTTGGCAGGAGCACGG
CAGCGCCGGATAAAGAGGCGGCGGACTTGCCGAACGACCTTCTTGGCGGC
GGTCGTGCTTGCCGTTGCCGTGCTCGGCCTGCAGCCGGCGGTAGCGGCAG
CGGGGGCGGTAGCGACAGCGGAGCGCAAGGAGGACGTCGTCCTGGCGGCA
GCAACGCTGGCAGCGTTCCAGGAGGTGAAGGCATGCTCTGTCGTTTTCAT
AGAGATATTTGAAATATGTACACAGTCGGGGGCGATGGAGCGAGGGTCAG
GATAGTGTGGATGAAATTGGCTGCACAGATGGCATATGTACCCTATCAAG
GCGGTTAGTACATTGAGTAGTGCGGGTGCTCTCGGTAGTGCAGGTGGAAG
CATTTGGCACATACCTTCGCTATAGAGGGGCCCCGACTGTACGAGAATTA
TGAGAGAAACATGTGGGGGTGTCTGCAGCTTAAACCTGTCGACCGCTCAC
TACCCCCGGCCTGTGTCCGGGCGACGTGAAGAAGTCTACATCATGCATAC
ACACACGAGTTACGAAAATGTGAAGAAAGGAACCCCACTTCTCAGCGATT
TTCCCTCCAGTCACTGAAAATACTCGAGCACATCCCTTTTCGACTGTGGT
TATGTCTCGAACGGGTAGTCTTTCTGTGCTTTTAGGTATATTTTCTGAAA
AGGCATCGGCATGTCGTGTGGAAAAGCTCAAGGCGTACAACAGTGGCAAC
ATTTTTGTCGCGAGTGCGGTCTAAACGGGGTGTCCGCTATATAGATAGTG
TGTGACCCCGGTTGGGTCGTCTAGCTAGTAGAAGTGGAGGAAGNNNNNNN
NNNAGGAAGGGGGCCAGAGGGGCAGACGACAGAATCCAATGATGGGAGGA
AAAAAAAAATAGTGAACCCCTTTGAACATCGGGAGTGTGCAAGGGACGAT
CCCTCCGCTATCATTGCCAACCATTCCCCACACGCTTGTGTTCTCGAAGA
GGAGAGCGGGAGGAGAGGAACGAACGAGCACCGCCGCCGGCAACAACGAG
CTACGGAAACGATCAACGGAAAAAACTAGCCCCCCCCCCGTGAGGCGCGC
GCCAACTACATTGGAACACCTCGTCGCCGGCACTGTAGGGGGTGTTAGCG
GTGCGCTGGTGTCTTACCCTCTGGACACGGTCCGAGTAAGGTGAGCTAGT
CCTACAGTCCAACAGCGGCTTTCCCGGCAGCAGCATCGGGATCAGCAGCG
GCTGGCCCAGCAGCAGTAGCAGCACATGCAATGGACTTGGATTCGGCTCT
TGTGGATTTTAGTCGTGCAGATGTATTTAAGTGGCCGGTCACGGCATTGT
CAGAACATGGTTTGCTTGTCCGGCAGAAGCTAGCGCGCACGAGCGATGTT
GCGTAGACACCTTGGCAGCCAGTCCTGCCTGAGTACAATAAGATTGACGC
CTTACCATGCTAAGCACAACCTTGTTTCCTCTCTCGACAGCCAGCGCTAC
ACCATGTTGTGGTGAAGCATAAAAAGAAACTCAGCGTTTGTTTTTTTACC
GTTGCAGCTCCCCCGCCCTTATTCCACTTCAGCGACCGTTGTATTACGTT
CTCCCCTCCTCCCGCATCAGAAACTATATCATGGTTATCCAATCCCCTTC
CATGAGAGGCGTTCGCCTCAGTTGGACCAATGCGGAAGGCACTGAGCGGA
GACCGGAACGGTTTTGAACGTAAAGACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACGCCCCAACAACGCGAT
GCAAGTACTGTACCCCCTACCCCCCGCCTCCCTCCCTCGCGAAAGGATGC
AAACTTGCGGGAAACGCTTGGGCGTGGCGGGCACGGCGTCGATGCTCTTC
CAAGAGGCTGGCGTTGCGGGGTTCTACAGGGGGGTCTTGTCCCCGATGGT
TGGGACGGGTATCATCAAGGCGGCCGTGTTTGGCGGATACGGGTTGTGCC
AGGCGTTGGTCCGGAGAGGCACGAGGAAAGGTGAGAAAGATCAGAGGGAG
GAGGTCTTTTGCGGTGTTCCGTTTTTTTTTTCAGCAACGATTCCGCAACG
AAAGAGCTTGATTGAGCGCTATGCTTTGCCATGGCCAGCCTCTTTTTCGA
GAACCGCCGGCGGTGGCGACGGGTGTTCCCTGGGTTCACGGTTGGCTCGC
TGCACCTTGTTAGGGTTCGCAGGGCCAAGGTCGGCATCCATTGCCTCCCT
CGCCGTGTCCAGCTGCTTAAACCGGCTACGGCGAGGGAGGCAATGGATGC
CGACCTTGGCCCTGCGAACCTTAACAAGGTGCAGCGAGCCAACCGTGAAA
CCAGGGAACACCCGTCGCCGCCGCCGGCGGTTCTCGAAGAAGAGGCTTGC
CGTGGCACAGCATCGCCACGAGATGTCTGCGTCCGAAGAGACATCCCCGG
AGCTGCAAAGGTGCAGAGAAGCGCTTCTGCAGTTCCGGGAGCAGAAATCT
TCCTCCAGGCCCTTGAACATGACACTCCTCATCTCCTTGTTCATCTCGCA
GCCCTTCGTCGTCAAACTGGCACAGAACTTGACTGGAAAGGGTAAGGCAG
CAGGCAAAGCAGGACAGTCAGAATTAGCATGTTAAAAAACAAGATATTTT
TCGGTGGGTCCAAAAAGTGTGGGAAGAGTATGCGGAGTTGGTGTGCTCTC
ACGGGGCCCTGAAGTCAATCAACCATGGCCGAAAAAAAAGACACCAAACA
GAGAGCCGCTTCTCGTTTCGGTGGCCCTTGGACAGAACCAACTCTCAACG
CATCCGAATGCAGAACGCGTCACCGCTTATTTTGCCCGGGGCTCGTTTCT
CTGATTGCCCACGGATGTCGATTCACCAAATGTTACGTGGCTGCATCCGC
ACAGGTGAGACGTATCTTGCCGGATCGAATGATGCCCAACCACGTATATC
TGTTACATGGTATGTAACGCACGGAGCATCAACTCCGGGCGCAACCTTGG
GAGGGTTACGTGTCGTAAATGATGTCGAATCGCAAAGGTGTGCAGTCGTC
CGGCCAAGACTTCATGACGTTGCCCGCGCCAGCAGCAGTCGCTCGTTCGC
CGTGGCTACTGCTGCTGGCGTGGGGAATTTCTTGAAGTCTTGGCCGGGCG
ACTGCACACCCCTGCGGTTGGACACCATTTCTACAATATGTAACGCTCCC
AAGGTTGCGCCCGGAGTTCGATTCTCCGTACGTATCCCATGCAACAAGTG
TAACGTGGTTGTATCTGCACATGTGATAAGGTTCTAGCGTAGGCTTCTTG
ACTGAGCACCTCACCTGTTCTACGACCAAGTTCTTAGATTTTGGATTTCT
TTCTTTCTTTTTTAAGCTCAAGTTACGGCGTCTGCGTCAGTGGGACCAGA
CGGACATTTTGAAGGTACTGAGCGGAGACCGGAACGGTTTTTAATGTGAA
GCCAACAGCGACAGCAACAACAACAACGACAACAACGAATGCCAACCGCT
GCGTTTTAAGTGGTGGCGCGTTATGTACCCCGTTGCTTGGCCCTACACAG
AGAGCGAAGAATTAAACCTTGTGGACCTCGGGGTTGCCGCCATGGGCTCC
GGGCTCGTTGGGTCCTTTGTGGTGACTCCGGTGGAGCGCATCAAGGTGAG
TGTGCCCTGTGGGCATGGGGCGTGCCTTGAACGAACCGCAAAACGACTCG
TGTTCTGTTGTTTATGTGCACCTTGAATTGGCGCAGCCGTTCGAGTCACC
GTCTCCCGGCCCAATACATGGTCGGCAAAAAGCGAAAACACATCTTCCTC
GTCCTCGCCTTCTCTGTCGTTGCCTTCTTCGATGGGGCCCTGGGTTTTGT
TGTATGAAGACTTTGGTCATTCGCGGTAGAAATCCCCCCCCCCAAAATGT
TTTTGTTGATGTGCTAGCCTGGTCCTGAAAACCCGGCGTGCTCCGTCCCG
GCTTGGCCGGGATGCGAGGTTAAAGGTCCAGCGACTACGGCATGCACGAC
TAAAGGTATGAGTACACCCCCAATGTCTTTAAATCTTGCGTCATTGACCT
TCACGACTTCTTTGCTCGCGCCGTTGACCCCCTCGTCCCCGTCCACAGGT
TGTGATGCAGGCAGCCCTATCATCCGCCCCCTCCTCTTCGTCTTCCATAG
CTGCGAGAGCGGGAGGGGGCTACGCGAATGCTTGGGGTTGCGCTAGGGGC
CTCGTGTCCGAGCACGGCTTTCGGGGGGGGCTGTACGCAGGGCTGGGCCC
GACGCTGCTACGGGAGGTGCCGGGGTAAGTCAGGGGCGCACAGAACAGAA
TTCTAGCAGAATAGCAGCACCAGCATTGAGGTATTGTTGTCGCTCTTGTT
TTAGTTGGCACAGCACGTGATGATGCTTCCCTCGATCCCTGTGCCTGCAA
CTGGCAGCCTCCTTGCTTTTTCAAATGCGTCTGAACTACTTCCTTTCTTG
TGCGATGGTACACCGAGAGCTTACGCCTTTCGATTGGATCCCTTTACGCT
GCTTCGGCAAGCGCCAGGGTAGGCGATGACAGTTAGTCTGCAGAGCATGC
TGCTTGCCTTCCCTCTCTGACCTTCTCGTGCTTCAATTCTCTTTTTTGGA
TATTCTGGATTGTTTTTCGTTGATTCACGGGGCTCTGTGTCGCATATAAA
GAGGTCAAAAAGGAGTGTCGACGCTACAGAAACCGGCAGCAGCAGCAGCA
GCAGCAACACCGAATGTTTCTGTAAGATTGGCAGCGCTGGTAGAGTTGCA
GCTGCCGCTGGAGGCACTGGCCGCAGATTCAGGCCAACTCAAGTAGAGCA
AGAAATTTGATTGCCGTCGTTTCTCCGTTTCTTTCTCGTCAATTGCGTTG
CAGCTACGCTTGCTACTTCGCAACCTATGAGGCGTGCAAACGGGTCCTGC
TTGGTAGGGGGTCCGGGGAAGACTCGTCTCGCGGGACCGTTCTGTTCAAG
ACGGCCGTGTCCGGGGCTTTGGCCGGGATCGCTGCTTGGCTGCCGATTTA
CCCCGGTGAGTTGTTGTTGTTGCTGCTGCTGCCGCCGGTGCTGTGATACA
CGGCTGCTGCCAGTTTTGCTGTTGACGTTAGACGTTTTCTGGATGTCGGC
TTCCTTGAGGTTATAAACCAACGGCTACGCTGCTGCTGCTGCTGTTGGAG
CTGACTGCTGCCGTGCTGCGCTGCTGCTGCTGTCGTTGGACACCATCTGG
GTATTGCTGTCTTCAGATGAAATACCCGTTCTGATCTCTGTCAACTACCC
AACGACCGACGCAGAGACTATCGCAACTGGTTGATGAAATGTTCCCCCGC
AAGTGACGTCCCCACTCACCATCCCCTTTCTGAGCGTCTCCTACGTTTCC
TGGAACCACCCTGCCGCAGCCCAATATCCCCGCAAATGCGTATTTTTCCG
CCCGCTGGTCCTGTGGGGGCAATGCTCCGTCCTCTCGAGGAGAACGCGTG
GTCTACCGACTGCGGCATGCGTCAACATGAGTACCCCTCCCCCCTCTTTG
TCCTACCACCAGCGGACGTGGTGAAGAGCCGGATGCAGAGCGCGGGGGCC
TCCGGCGCGGGTATGATCTCTACCGCCTCCGTGATGTGGAGAACCGAGGG
ACTCGCGCCGTTCTACAGGGGGCTGTCGCCGACGATCGTTCGGGCGATGG
TTAACCACGCGGCGACTTTCCTGGTCTACGAGGCGTCGATGACCTTCATC
ATGAAAAGGGGGAAACGCGCCGAGGAGGTGTCCTCGGAAGAGCAGGATGA
TCGGAGTTAGAGGGAGGGGAGCAGGTGGTGTGATGAGTTTGAGCGAGAGA
GAGCACGTATAGAGGAAGGGTGTGATGAGTTTGAGCGAGAACAGGTATAG
AGGAAGGGTGTGATGAGTTTGAGCGGGCGAGGAGAACAACATAGAGGAAG
GGTGTGATGAACAGTCTTTTTGCGGGTATTTGTTATGGGCAATGGGGAGA
TGTTAATGTTTCGCGGAGAGCATCGTTGTCTGATCTCTATCAATTGCCTC
ATTCTTGCGGTGGTTTGGCTGCCCAGTTGCTGTTTTCCGGTTTGCTGTCG
AGGAGGCGTGCCGAGGGATGGCGTCCAAAGGGCGAGGTGGCTGAGAAGGC
TCGAAAGTCGTTGTCCATAGCGTCACGGTCGGCAAAGAAAACGAGAACTG
AGAGAAACATCGACACGTGAAGACGCGCCTTTCCTGATTTTGTCATATTT
TTACTTCCTTGTCAGTGTCGGCGCTTTGAGCGATGAACATTGTCTTCGGG
GGTTGGACACGAGAGGGGTTGGTTGCAATTCCTGCTCTCTTCCTGGCACT
TCGTAGTACTGTAGATTTAGTGCCAACAAGACCTGCGGCAGTAGCCGCCC
GTTTGGGAGGAGCGTCAATTTCGGGTCTAGCCTCAATTTCTTGTTTCGTT
TTCCCGGCAAGGATGGGCTTCTTAGAGAAAGGGAATAGCGGTGTTGGACC
CATCGCTGAGTGGTGTGTCTGAGCGCTCTTCTTGTTTCGTGAAAACATTG
TCCGTTGTTTCTCGAACGGGATGTTTGCTCCAGTTTCGTTAGTCCATGCC
GGCTGCCTTCCCTCGGCCACTTGCCAGGGATCATGTTTGCTGGGAATTTG
ATTTTCCAACAGAATTGAAAGGCGGTGTTCTGTTTCGGGGAAGTGAAGCG
ATCGAGGTCTTGCTCCGTGCTTTTCTCTTCGCTTATTGGACCTAGAGTAT
TCTTCGGGCAAGAGGGTTGGGTGTTGACGCAATGAGGGAGATGGAGCGGA
ATTCAGGATGGAATTGTCAACCTTTGGGTGCTTGAAATTTGTTTCTGTAG
CGCCGCATTTGTTGTTGCTCTTCATATCGCTTGGGAATAAATATTGGGTC
GATTTTTGCTCCCGATCAATATCACAACAGGCTGTTTGTTTGTGTTTTTA
GCCAGTATCTAGTCAAGTTTTGGTGTGATGAAAATATTTAGATTTCGTCC
CAAGTCACACGATTTTGTGGCGCTGGTTCAAATCACGTGGAGTAAGTATG
GCGTCGAATTTTGCTCCCGGTGCATATCACAAGGCTGGGTACAGGGTGGC
CCTTTGGTGGCACTGTGGCACTGTTTCAAACCGCTTGGAGGCAGTGGGAG
GTCAAGGTTTGGTCTGTGATGAAAAGCACAAGATTTCGTCCCAAGTCACA
CATAGCAAGGTGCTCTGAAGTTTGTTTTTGGGGTCCTTGCTGGCGCAAAT
CGTAAGATTTCGTGGAAGGCTACTTCTTCTGGTACGCTAGTTCTTGAAAT
CACTTCAGTTACCATTGTGTGGCACCTTTCGTTTGATGTCCGTCTATACC
GTAGGCCAAGGTAGCGAAGCCTAGGGAGATTGCGGCGCCGGTGGGGGAGA
AAAGTAAGTCTGTCGGGGGGGGTTAACTCTTTGGGGCTGTGGAGGCCCGA
GTGAGAATAGAATTGCCAATTGGCTCATGTTTTCTCCTAAGGTTGCACTT
CCTTCCCGATCGATGTGATCGGCAGCGAAAACTTCCTGTTAGACTTAGAA
TGGGGCGCAGTTGATGTGCGCGTACGGGGGTGGGGTGTACAGGTGGCACT
CCTCGCCGCTATGCCCCAGGGTGTGGTTTTTCGCCAGACGGCTTGCGGCA
ACGTTCGGTGCTACACGGGGGCATCGTTGCTGAGTGTTTGTTTTTTGTTA
ATTGTCGCTTTTGTATCCGTTGTGAGATTTTTCATAGAGGGGGCGATTGC
TTTCGCCCTGTAGACACAAAAAATATTGCTACCTGCATGAAGACCGGGAG
TTTTTTTTTAAGCCGC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1609:4248..13613+

>mRNA_E-fasciculatus_F_contig1609.4167.1 ID=mRNA_E-fasciculatus_F_contig1609.4167.1|Name=mRNA_E-fasciculatus_F_contig1609.4167.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2508bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1609:4248..13613+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCTCCGACGCAGCTGTTGGCAGGAGCACGGCAGCGCCGGATAAAGAG
GCGGCGGACTTGCCGAACGACCTTCTTGGCGGCGGTCGTGCTTGCCGTTG
CCGTGCTCGGCCTGCAGCCGGCGGTAGCGGCAGCGGGGGCGGTAGCGACA
GCGGAGCGCAAGGAGGACGTCGTCCTGGCGGCAGCAACGCTGGCAGCGTT
CCAGGAGATGTCTCCGACGCAGCTGTTGGCAGGAGCACGGCAGCGCCGGA
TAAAGAGGCGGCGGACTTGCCGAACGACCTTCTTGGCGGCGGTCGTGCTT
GCCGTTGCCGTGCTCGGCCTGCAGCCGGCGGTAGCGGCAGCGGGGGCGGT
AGCGACAGCGGAGCGCAAGGAGGACGTCGTCCTGGCGGCAGCAACGCTGG
CAGCGTTCCAGGAGAGGAGAGCGGGAGGAGAGGAACGAACGAGCACCGCC
GCCGGCAACAACGAGCTACGGAAACGATCAACGGAAAAAACTAGCCCCCC
CCCCGTGAGGCGCGCGCCAACTACATTGGAACACCTCGTCGCCGGCACTG
TAGGGGGTGTTAGCGGTGCGCTGGTGTCTTACCCTCTGGACACGGTCCGA
GTAAGAGGAGAGCGGGAGGAGAGGAACGAACGAGCACCGCCGCCGGCAAC
AACGAGCTACGGAAACGATCAACGGAAAAAACTAGCCCCCCCCCCGTGAG
GCGCGCGCCAACTACATTGGAACACCTCGTCGCCGGCACTGTAGGGGGTG
TTAGCGGTGCGCTGGTGTCTTACCCTCTGGACACGGTCCGAGTAAGGATG
CAAACTTGCGGGAAACGCTTGGGCGTGGCGGGCACGGCGTCGATGCTCTT
CCAAGAGGCTGGCGTTGCGGGGTTCTACAGGGGGGTCTTGTCCCCGATGG
TTGGGACGGGTATCATCAAGGCGGCCGTGTTTGGCGGATACGGGTTGTGC
CAGGCGTTGGTCCGGAGAGGCACGAGGAAAGGATGCAAACTTGCGGGAAA
CGCTTGGGCGTGGCGGGCACGGCGTCGATGCTCTTCCAAGAGGCTGGCGT
TGCGGGGTTCTACAGGGGGGTCTTGTCCCCGATGGTTGGGACGGGTATCA
TCAAGGCGGCCGTGTTTGGCGGATACGGGTTGTGCCAGGCGTTGGTCCGG
AGAGGCACGAGGAAAGAGAGCGAAGAATTAAACCTTGTGGACCTCGGGGT
TGCCGCCATGGGCTCCGGGCTCGTTGGGTCCTTTGTGGTGACTCCGGTGG
AGCGCATCAAGAGAGCGAAGAATTAAACCTTGTGGACCTCGGGGTTGCCG
CCATGGGCTCCGGGCTCGTTGGGTCCTTTGTGGTGACTCCGGTGGAGCGC
ATCAAGGTTGTGATGCAGGCAGCCCTATCATCCGCCCCCTCCTCTTCGTC
TTCCATAGCTGCGAGAGCGGGAGGGGGCTACGCGAATGCTTGGGGTTGCG
CTAGGGGCCTCGTGTCCGAGCACGGCTTTCGGGGGGGGCTGTACGCAGGG
CTGGGCCCGACGCTGCTACGGGAGGTGCCGGGGTTGTGATGCAGGCAGCC
CTATCATCCGCCCCCTCCTCTTCGTCTTCCATAGCTGCGAGAGCGGGAGG
GGGCTACGCGAATGCTTGGGGTTGCGCTAGGGGCCTCGTGTCCGAGCACG
GCTTTCGGGGGGGGCTGTACGCAGGGCTGGGCCCGACGCTGCTACGGGAG
GTGCCGGGCTACGCTTGCTACTTCGCAACCTATGAGGCGTGCAAACGGGT
CCTGCTTGGTAGGGGGTCCGGGGAAGACTCGTCTCGCGGGACCGTTCTGT
TCAAGACGGCCGTGTCCGGGGCTTTGGCCGGGATCGCTGCTTGGCTGCCG
ATTTACCCCGCTACGCTTGCTACTTCGCAACCTATGAGGCGTGCAAACGG
GTCCTGCTTGGTAGGGGGTCCGGGGAAGACTCGTCTCGCGGGACCGTTCT
GTTCAAGACGGCCGTGTCCGGGGCTTTGGCCGGGATCGCTGCTTGGCTGC
CGATTTACCCCGCGGACGTGGTGAAGAGCCGGATGCAGAGCGCGGGGGCC
TCCGGCGCGGGTATGATCTCTACCGCCTCCGTGATGTGGAGAACCGAGGG
ACTCGCGCCGTTCTACAGGGGGCTGTCGCCGACGATCGTTCGGGCGATGG
TTAACCACGCGGCGACTTTCCTGGTCTACGAGGCGTCGATGACCTTCATC
ATGAAAAGGGGGAAACGCGCCGAGGAGGTGTCCTCGGAAGAGCAGGATGA
TCGGAGTTAGCGGACGTGGTGAAGAGCCGGATGCAGAGCGCGGGGGCCTC
CGGCGCGGGTATGATCTCTACCGCCTCCGTGATGTGGAGAACCGAGGGAC
TCGCGCCGTTCTACAGGGGGCTGTCGCCGACGATCGTTCGGGCGATGGTT
AACCACGCGGCGACTTTCCTGGTCTACGAGGCGTCGATGACCTTCATCAT
GAAAAGGGGGAAACGCGCCGAGGAGGTGTCCTCGGAAGAGCAGGATGATC
GGAGTTAG
back to top