mRNA_E-fasciculatus_F_contig1605.4140.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: D8LLF2_ECTSI (Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF2_ECTSI) HSP 1 Score: 924 bits (2389), Expect = 0.000e+0 Identity = 536/563 (95.20%), Postives = 541/563 (96.09%), Query Frame = 1
Query: 1 MAARRRTTLAAVSSASLNSRGSMGTTSSGRSSLASSKQPSSRFSISTSSAAGRSTMGAGAGGGGRTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKDLKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQ 1689
MAARRRTTLAAVSSASLNSRGSMGTTSSGRSSLA KQPSSRFSI RTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDD++HQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLRE+IATQEFSASDMEGQLSERSRLRDALAGAGE K+KARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALK+LKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQ
Sbjct: 1 MAARRRTTLAAVSSASLNSRGSMGTTSSGRSSLAXXKQPSSRFSIXXXXXXXXXXXXXXXXXXXRTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQ 563
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A836CEN5_9STRA (Kinetochore protein NDC80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN5_9STRA) HSP 1 Score: 301 bits (772), Expect = 4.720e-91 Identity = 200/467 (42.83%), Postives = 275/467 (58.89%), Query Frame = 1
Query: 289 RPSMSTAGDRKS-VGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPS--GRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEY--TEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSAS-----------DMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKDLKIAIVRRTAGLRQDLSNLLVEEDKAE 1641
R S++ G RKS VG++R+++FGT ++D RP+ DK N S+ L YL D+GYDQPI++K LTRPSGRDFNNI GFLFRQ DP ++PS RFED+V+PFLK + YPFT+SKS L AVGAPQ+WPK + AISWIV+ L+YD+ +A E EQ+ R E + D F YL +AY CFL GD+ S A+ + T + GAE R A AL + + +L + +LP L + + SD EK L+ +++ HR L EKV+KR EE R K L + E A+LRE++A QE SA D++ ER RLRD + A E K A+K GW A++++S EAL+ +H +A+AL LVP A+NA +Y + I+ L+ E+ VL+NDVRG IRPAL ++ A+VRR R+ L LL ++ +E
Sbjct: 32 RHSLAAPGGRKSSVGMKRSSNFGTAA-IKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG---------EVDIADHA-----FFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNA--ALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAA---AKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASE 478
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: W7TL40_9STRA (Kinetochore protein NDC80 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL40_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.960e-57 Identity = 156/459 (33.99%), Postives = 240/459 (52.29%), Query Frame = 1
Query: 316 RKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDD-QGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLD---QEDGVLTNDVRGVIRPALKDLKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELL 1680
+ S G+R++T++G+ R D RP DK ++ AS+ L YLTDH YDQP ++K L RP+ +DF I FLFRQ+D N+R +G+ ED+V+ F K +RYPF ISK+S+ AVG TWP ++ +I+W+V+ L YDE + Q A + VDD + AD+K YL +AY FL+GDDD + + + + + + LE E + + +LP L++ LSD K SL+E++ HR L KV+KR EE L L + L+ +A QE S D+ ER+RL +AL A E K K K W A++EVS L+ + +A AL L+P A N+ Y + + + + + ++ D++GVIRP+L +K ++ + R + +L EE K EE + + ++E+E L
Sbjct: 103 KSSTGLRKSTAYGSH--VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGC-------GSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPI---TARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETL 549
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A7S4K7P6_9STRA (Kinetochore protein NDC80 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K7P6_9STRA) HSP 1 Score: 175 bits (444), Expect = 5.720e-44 Identity = 130/476 (27.31%), Postives = 247/476 (51.89%), Query Frame = 1
Query: 301 STAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRP-SGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDD-QGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQ--EDGVLTN--DVRGVIRPALKDLKIAIVRRTAGLRQDLSNLLVEEDKAEE---NITDVLSEVELLHKQASLL 1701
+T RKS G S + D RP+ +K+++ + ++ L YL GY+ P++ K+L+RPSGRDFN I F+ R +DP++ + +FED+V K + YP+ ISK++L A G+P TWP ++ A+ W+++ L +++ EE+ E +AT + +++ + +K F YL +AY FL DD ++A+ E ++++ E + + E N + + ++LL G LP L++ + +D EK L++++E H+ L++KV++R E + +E L + +L+ ++ +QEFS D+ E+ R +++A A K + K W E+S + L+E + +Y + L L ++ + Y +++ T L Q + + N D++G + P + LK + A ++D LL ++++ E+ + TD + E+++ K+ L
Sbjct: 63 ATPSRRKSNGGEWRQSLAPQAALKPDPRPIAEKSYMTSCINSLLQYLVSSGYEHPVSRKTLSRPSGRDFNQIVTFILRCIDPSFNDGTQKFEDEVAMAFKSLGYPYPISKTALVAAGSPHTWPTLLAALMWLIELLGCEDS---QEEDILRNEDDATM--------NSLEEIESRSEKAFFRYLNKAYVAFLSADDPQYEALEEALVEYFEKDNLKIEGEFQRVTETNMEIQEEIKQLLRNGEELPELKQRREDYATDLEKFYDLVKKLEEHKATLRKKVEERTAELVKREEGLQQITAQIDALKRQVQSQEFSVEDIRRMQKEKVRQEESIARAAGAKNEQNKALWEVSTELSQRVDQLRETVEKYNWKVMELHL-----SAERDSNQNKYELELH-TDLAQVGDPAKIFNGVDIKGSVLPMVFSLKCDFAEKCANAKRDTLKLLDQKEQTEKATAHATDCVKELDVKSKECEQL 521
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A1V9Z1G3_9STRA (Kinetochore protein NDC80 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1G3_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.300e-41 Identity = 123/393 (31.30%), Postives = 202/393 (51.40%), Query Frame = 1
Query: 310 GDRKSVGV-RRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDID 1485
G SVG RR+++FG G +D RP+ D+ +N ++ L +LT+H Y+ PINS L +P +DF I FLF+QLD +Y PS +FEDD+ + + +RYPF ISK++LAAVG+P +WP ++ AI W++D L Y E+ D+++ DD G YL ++Y FL +DD +A+ + E E E + +L + NE + Q +E ++ L + + D EK+ L+E++E+++ L + + + +E L + L+++I TQ+FSA D++ ER R++D L + + + W + E+S K+ L+E++ RY A L FG A +YA+ ID
Sbjct: 62 GRNGSVGSGRRSSAFGVRGSRTNDPRPISDRGFMNNAIRMLVEFLTEHNYEHPINSHLLFKPMKKDFIYIMQFLFKQLDRSYEPSPKFEDDIAIWFRHLRYPFPISKTALAAVGSPHSWPTLLAAIKWLIDLLKYHESTT--------------------DRDEMEDDIGVTANIVFEYLADSYKAFLSDNDDECKALQQQMVERFATEVDVYYEDINDLRQQNEEILQEIEEHQNEM-QLDSFIAKKRDCQHDREKLLQLVEKLESNKSLSLASIQSNEHKIAKKQEDLRDAQAEIIQLQKRIDTQQFSAEDVDRMEGERHRMQDLLEQFDARYKELQSQHWEKETEISKMKDVLEEDVKRYMNTATRLKF--FGKY----AQGVDYALSID 427
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A2R5H1W7_9STRA (Kinetochore protein NDC80 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1W7_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.790e-40 Identity = 138/474 (29.11%), Postives = 232/474 (48.95%), Query Frame = 1
Query: 295 SMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDID---DTK--------LDQEDGVLTNDVRGVIRPALKDLKIAIVRRTAGLR---QDLSNLLVEEDKAEENITDVLSEVE 1674
++S A RKS+ + + +SD RPL +K+ + L +L++H YDQ ++ K L RP+G+DF ++ FLFR LDP+ + + D+V +K +RYPF ISK+SLAAVG+P TWP ++ ++ W+V+ L YDE ++E D +D ++ D + F Y+ +AY CFL GDD+ ++ + E E D EE + +LE LGQ + ++ + +P LE+ + SD K L+ + ++ ++ KV +R E R + L E A + ++ + QE + +D E E+ L + E + + E W ++ +S + ++ L Y A++L L TQ A AG+ DI DT+ DQ G G I AL+DL+ +++T +R +L + E D+A+E + V+ +E
Sbjct: 62 TVSVASRRKSIATMGSATSAL----KSDPRPLNEKSFRAQCIETLIRFLSEHNYDQALSPKILHRPTGKDFEHVVIFLFRMLDPSRKFGSKVADEVTVMMKGLRYPFNISKTSLAAVGSPHTWPALLASLVWLVELLEYDELAGLSE-----------------DDDDDASEEDID-RIFFTYIRKAYQCFLCGDDNRYEELDAELAGKFRERDVVIEEEITDLERKRSDLGQDLEFESEKQSLIPELEQRKRDFTSDKLKWDKLIRQFLENKDIMVAKVREREAEVRAKEVELAQAEHAKSKVQSILDEQELNPADAERMTQEKRSLEASCNTVLEQRDDMQNETWEVEMSISKRTQRIEALLEEYNAIAKSLKL----TQAAA-AGQQRQGADIQLRLDTRRNMLVSLGADQATGQGERADVGAITSALQDLREESIKKTHQIRTSNMELHAKVEENDEAQEAVRSVIRGLE 508
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A7S3PLI3_9STRA (Kinetochore protein NDC80 (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLI3_9STRA) HSP 1 Score: 163 bits (413), Expect = 5.120e-40 Identity = 126/440 (28.64%), Postives = 219/440 (49.77%), Query Frame = 1
Query: 370 RSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKDLKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQ 1689
++D RP+ +K ++AS+ KL +L++H YD PI+ K L+RP+G+DF N+ FLF +D N + +F D+V P K + YPF ISK++L+AVG+ TWP ++ ++ W+++ L Y E +R RE E +D + D K F YL +AY FL GDDD + + E E D+ +E LE E L + ++ + +SLPAL K D K L++++ H+ L+ K+ E ++ L A L++++ QE S +D E +SER + + +K W ++ ++ E L+ +Y E A L LVP + A+N+ ++ + ++ + +L DV+ V++ +L LK + + +T ++ + +K EE +V S + L ++
Sbjct: 113 KNDPRPISNKGFMHASIRKLIQFLSEHNYDHPISPKVLSRPTGKDFQNVLQFLFLLVDRNLKFGQKFTDEVPPIFKGLCYPFNISKTALSAVGSLHTWPPLLASLIWLMELLEYHEA-------ERHRESE-------------IDLENGD-KVFFTYLRQAYQSFLCGDDDKSEELDNELLGTFGERDSAIQEQTSQLETQREDLLKDLDKIKNSKSSLPALTCQKKDYQEDLVKFQGLVKKLREHKENLEGKLRSSEAEFNARQQELNEALSVKAKLQKQLDEQELSPADAERIISEREAATVEQGQVNQKREGMQKSAWEIEMTIAKKLEQLENMTSKYNEVAARLKLVP---KSAQNSQGVDFELKLNLAGFGNGEDLLNVDVKKVLKTSLFSLKDSAMTKTNEIKTQCMEFQEQVEKNEEEKVEVESRILRLEQE 528
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A7S3UM16_HETAK (Kinetochore protein NDC80 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM16_HETAK) HSP 1 Score: 153 bits (386), Expect = 1.570e-39 Identity = 95/218 (43.58%), Postives = 127/218 (58.26%), Query Frame = 1
Query: 397 KAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRP--SGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVD-DQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALE 1041
K H+ AS+ +L YL+D GYD PI+ K L RP+GRDF NI FLFRQ+DPN+ P +G FE+ V+ K +RYPF ISK++L+AVG+P TWP ++G+++W+V+ L YD AE EQ E D G D DQ +D + F+ YL AY FL GDDD + A+ E D A L L NE L + Q+L + + LP LE
Sbjct: 1 KKHVAASVRQLVNYLSDRGYDHPISPKILQRPTGRDFQNIVTFLFRQVDPNWAPEAAGSFENAVIATFKTLRYPFAISKTALSAVGSPHTWPTLLGSLTWLVELLEYD-----AEVEQARAEA---------DHHLGFDGDQASDDRAFMDYLGRAYTAFLMGDDDLYAALEGELVAGFDRGQGRAAADLAALRGRNEDLQRQLQQLEARRDRLPQLE 204
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: H3GCH0_PHYRM (Kinetochore protein NDC80 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCH0_PHYRM) HSP 1 Score: 158 bits (399), Expect = 5.820e-38 Identity = 143/470 (30.43%), Postives = 241/470 (51.28%), Query Frame = 1
Query: 292 PSMSTAGDRKSVG---VRRTTSFGT-------GGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTR-PSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEA---RDE--------------EDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVL--TNDVRGVIRPALKDLKI-AIVRRTAGLRQDL 1608
P+ S+A +R+S+G VRR++++G+ GG D RP DK++LN+ + L +L+DH YDQ + L R PS ++F N+ FLF+Q+DP + +FE+DVV + +RYP ISK+SLAAVG P TWP ++ +ISW+++ L YDE I +A E +++ E D+E+G K F YL+ +Y FL G+DD + + E +DE + ++ LE+ E L + + + N+L L+ SD +K + + E + L++KV EE++ +++ L + ++ L +I QE SA D+E ER+RL D L + + ++ ++ K++ +R E+ + L +VP + A+NA +Y +++D +L++ D VL + ++ +R A +LK I R AGL Q L
Sbjct: 31 PNKSSASERQSIGISVVRRSSTYGSRSSVSGRGGTRVLDPRPTSDKSYLNSCVKTLVEFLSDHMYDQTLPHGLLRRGPSKKEFCNMILFLFKQVDPTFEFGVKFEEDVVLQFRNLRYPIPISKTSLAAVGTPHTWPTLLLSISWLIELLTYDEAIQLANESEQSEEN---------DEENG-------DKLFFKYLDASYHAFLAGEDDKFAMLERQEREKLTFKDEYCLLTLGWFFVTVTRNETVKQETSELEQQREELKKRIENAKKEKNALSLLKANKLDCESDLKKFKDYVAKHEKRKAKLEKKVGSLAEEQQSIEDELNVRQQEIQRLLTRIENQELSAYDIEQIAQERARLTDQLHQVIDRQ--------------NALQQQTKKDENRGVEKRDILKIVP---RTAKNALNFDYTLELDQ-ELEELDAVLKLNHHLKTSVRKAALELKQNRIARANAGLDQAL 466
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Match: A0A0D2WHJ3_CAPO3 (Kinetochore protein NDC80 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WHJ3_CAPO3) HSP 1 Score: 159 bits (401), Expect = 7.530e-38 Identity = 126/441 (28.57%), Postives = 220/441 (49.89%), Query Frame = 1
Query: 376 DQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQ-GADQKNFVAYLEEAYCCFLEGDDDSHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREKIATQEFSASDMEGQLSERSRLRDALAGAGETKLKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKDLKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQAS 1695
D RPL DK ++ S+ L ++LT HGY +N K L+ PS DF + FL+ LD +Y +G+ ED++ K ++YPFTISKSSL AVG+P TWP ++GA+SW+V+ + Y ++ + A + DG D + +D + F YL AY FLEG D ++ + E D + + + L + +A +E + + L A+E KL +SD +K ++ +E H+ + K+D +E K L L + A L+ +I Q+ S +D+E ER ++ +AL A + + + W +++V+ +++ + Y + AE L+++P A NA ++ + ++ + VL DV RPAL L+ + + L++ ++ E +T+ +EV +L +A+
Sbjct: 164 DPRPLSDKTYMADSIRNLMSFLTQHGYSTAVNVKMLSSPSVTDFQRMFKFLYAHLDASYPFAGKLEDEIPVLFKRMKYPFTISKSSLFAVGSPHTWPTLLGALSWLVELVTYSMSV-----DPMACLFPSVG--------DGFDQELRSDNQIFFEYLSRAYVSFLEGSD-NYDDLRAELANTFDARNVMIDRDVERLTQEKDAYLAEIEESR-KPSPLEAIEARRKLMVSDKDKFLKYVQNLEQHKVANERKLDDHAQEVTAAKRELDQLHQDRAQLQAQIDAQDMSPADVERITKERQQVDEALRAAVVAREEMERIAWEREMQVTRKIAEMEQMISAYNKLAETLMIIPTD---AVNADGVDFEIQLNMNGSNPH-SVLNVDVNEHARPALTRLREKFTVQHQLATEQLASCQERLEQEAEMVTERETEVNVLESKAA 585 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1605.4140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1605.4140.1 >prot_E-fasciculatus_F_contig1605.4140.1 ID=prot_E-fasciculatus_F_contig1605.4140.1|Name=mRNA_E-fasciculatus_F_contig1605.4140.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=569bp MAARRRTTLAAVSSASLNSRGSMGTTSSGRSSLASSKQPSSRFSISTSSAback to top mRNA from alignment at E-fasciculatus_F_contig1605:7946..14323+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1605.4140.1 ID=mRNA_E-fasciculatus_F_contig1605.4140.1|Name=mRNA_E-fasciculatus_F_contig1605.4140.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6378bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1605:7946..14323+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1605:7946..14323+ >mRNA_E-fasciculatus_F_contig1605.4140.1 ID=mRNA_E-fasciculatus_F_contig1605.4140.1|Name=mRNA_E-fasciculatus_F_contig1605.4140.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3414bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1605:7946..14323+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |