prot_E-fasciculatus_F_contig10515.411.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10515.411.1
Unique Nameprot_E-fasciculatus_F_contig10515.411.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length597
Homology
BLAST of mRNA_E-fasciculatus_F_contig10515.411.1 vs. uniprot
Match: D7FJP7_ECTSI (Rho guanine nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP7_ECTSI)

HSP 1 Score: 647 bits (1669), Expect = 6.460e-218
Identity = 415/608 (68.26%), Postives = 443/608 (72.86%), Query Frame = 0
Query:    1 MDNLQRDKGSMHTSAKNIDPAAARVPPVMVSDAPMTQAHVRVPDSVDRSEWLKLRSRRGSGRRRASSASATPPTLGATPPSHSRKMSMDSTTSSLATETSLRSAMSTPPQRGNNDERVRRSVTFAVDDHDHGRHRPSLDSEPRRRTASAAASSAQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKPCAGDSAIPRVFPVVSPARGRVSPYALAEETAA-SATRAARRSVGGNTPVVVGVPAESA---SARGAARAAAVVDVGRVEGVGRAAAEEGSRSLDVAGNMRLRVPVSEDHVGKGEPEHPRSLGGEEGLGVSGSADAVGESEPRGSSSLRDMSQGREVGRSKGPSVVGGHQ-VGRLDRVDGACRGSNVDACGSATRAEGGTQLSPTASSRNDSPCFVAGRTASETTGQFLP-GSTAAGWDGRLPPTVTPGLHGSLGLEAAATTDGAGAHQAGVVVDGGSMPRDERAMSPASGEEISPEEEEEEHRVSIATGNEEVTAVLEVEVDPEVLSAPVPVSLPHPPPATASEATH-LC----IPLEATEGTRESPPSLPEGEGQTKIAPLGVLKRDPREEGGGVGSAPLRHRGPVEEDGQ 597
            MDNLQRD GSMHT  KNID AAA  PPVMVSDAPMTQAHVRVPDSVDR+EWLKLRSRR              PTLGATPPSH RKMSMDSTTSSLATE SLRSAMSTP  RG NDERVRRSVTFAVDDHD  R RPSLDSEPRRR   AA+S+ QQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKPCAGDSAIPRVFPVVSPARGR+S +AL EET   SATRAARR  G   PV+VGVPA++    +A  AAR A+VV VGR E VGRA  EEGS  LDVAGN+RL   VS D VGKG+PE+PR LGGE GL V    D+VGESEPRGSSSLRD SQG EV RS G   V G Q V  LD +DG    SNVD CGS TR E GT LSPTAS R+D P  VAG  A+ T    LP  S AAG DG   PT TPGL+ S  +    TT G GA QAGVVVDGGS PRDER +SPAS EE  PEEEE+  R SI TGNEE +AV EVE +PEV  APVP +L HPPPA  S  T   C    +PLE  E TRE+PP   E EG T+IA   V   D REEGGGV S PLRHRGP+EE  Q
Sbjct:    1 MDNLQRDNGSMHT--KNIDRAAAGAPPVMVSDAPMTQAHVRVPDSVDRTEWLKLRSRRXXXXXXXXXXXXXXPTLGATPPSHGRKMSMDSTTSSLATEASLRSAMSTPLHRGQNDERVRRSVTFAVDDHD--RRRPSLDSEPRRR---AASSAQQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKPCAGDSAIPRVFPVVSPARGRISAHALGEETTINSATRAARRGAG--APVMVGVPADTGVVVTAAAAAREASVVGVGRAEEVGRAGTEEGSSYLDVAGNVRLGGSVSGDRVGKGKPENPRRLGGEGGLDV----DSVGESEPRGSSSLRDTSQGGEVWRSNGVVGVAGDQHVEHLDSLDGT--NSNVDGCGSTTRVEFGTHLSPTASLRDDYPRPVAGSPAAAT----LPLDSAAAGLDGLPTPTATPGLNTSTTV----TTAGTGARQAGVVVDGGSKPRDERTVSPASDEEAKPEEEED--RESIVTGNEEGSAVPEVEDEPEVRPAPVPAALLHPPPAAVSVTTEPRCGQTHLPLEPNEATRETPPPSVEFEGGTEIAR--VPDPDTREEGGGVVSTPLRHRGPLEEGSQ 581          
BLAST of mRNA_E-fasciculatus_F_contig10515.411.1 vs. uniprot
Match: A0A6H5KYW1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW1_9PHAE)

HSP 1 Score: 613 bits (1582), Expect = 3.570e-204
Identity = 400/620 (64.52%), Postives = 430/620 (69.35%), Query Frame = 0
Query:    1 MDNLQR-DKGSMHTSAKNIDPAAARVPPVMVSDAPMTQAHVRVPDSVDRSEWLKLRSRRGSGRRRASSASATPPTLGATPPSHSRKMSMDSTTSSLATETSLRSAMSTPPQRGNNDERVRRSVTFAVDDHDHGRHRPSLDSEPRRRTASAAASSA-----------------QQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKPCAGDSAIPRVFPVVSPARGRVSPYALAEETAASATRAARRSVGGNTPVVVGVPAESAS-ARGAARAAAVVDVGRVEGVGRAAAEEGSRSLDVAGNMRLRVPVSEDHVGKGEPEHPRSLGGEEGLGVSGSADAVGESEPRGSSSLRDMSQGREVGRSKG-PSVVGGHQVGRLDRVDGACRGSNVDACGSATRAEGGTQLSPTASSRNDSPCFVAGRTASETTGQFLPGSTAAGWDGRLPPTVTPGLHGSLGLEAAATTDGAGAHQAGVVVDGGSMPRDERAMSPASGEEISPEEEEEEHRVSIATGNEEVTAVLEVEVDPEVLSAPVPVSLPHPPPATASEATH-LC----IPLEATEGTRESPPSLPEGEGQTKIAPLGVLKRDPREEGGGVGSAPLRHRGPVEED 595
            MDNLQR D GS+ TSAKNID AAA  PPV+VSDAPMTQAHVRVPDSVDR EWLKLRSRR S RRRASSAS+T PTLGA PPSHSRKMSMDSTTSSLATE SLRSAMSTP  RG NDERVRRSVTFAVDDHD  R RPSLDS PRRRTAS+A                      QCGVCRAEFTRYRRPHRCRAC K VCATCSPARLPKRTCKPCAGDSAIPRVF VVSPARGRVSP+A  EET  SATRA+RR VG    V+ GVPA++       A  A VV V R E VGRA  EEGS SL VAGN+RL   VSED VGKG+PE+PRS GG+ GLGV    D+VGESEP GSSSLR+ SQG EV RS G   V G      LD +DG    SN D CGSATR E  T LSPTAS  ND P                     AG DG  PPT TPGL+ +    A   T G GA QA VV DGGS PRDER +SPASGEE+ PEEE+EE RVSIAT NE  +AV EVE +PEV  APVP +L HPPPA AS AT   C    +PLEA E TRE+PP   E E  T+IA +   +   REE  GV S PLRHRGP+EED
Sbjct:    1 MDNLQRRDNGSIRTSAKNIDRAAAGAPPVIVSDAPMTQAHVRVPDSVDRPEWLKLRSRRRSDRRRASSASSTHPTLGAIPPSHSRKMSMDSTTSSLATEASLRSAMSTPLHRGQNDERVRRSVTFAVDDHD--RRRPSLDSNPRRRTASSAGRKIFPXXXXXXXXXXXXXXXXQCGVCRAEFTRYRRPHRCRACSKVVCATCSPARLPKRTCKPCAGDSAIPRVFSVVSPARGRVSPHAPGEETT-SATRASRRCVGAT--VMAGVPADTGVIVTAVAHEAEVVGVARAEEVGRAGTEEGSSSLGVAGNVRLGGSVSEDRVGKGKPENPRSSGGKGGLGV----DSVGESEPGGSSSLRNTSQGGEVWRSNGIVGVAGDQHAEHLDSLDGT--NSNTDGCGSATRVEFDTHLSPTAS-LNDYP--------------------PAGLDGLPPPTATPGLN-TYRYVATVATAGTGARQAWVVADGGSKPRDERTVSPASGEEVKPEEEDEEDRVSIATRNEVGSAVPEVEDEPEVRQAPVPAALLHPPPAAASLATEPRCGQPHLPLEANEATRETPPPSVEFERGTEIARVPNPRN--REERDGVVSTPLRHRGPLEED 585          
BLAST of mRNA_E-fasciculatus_F_contig10515.411.1 vs. uniprot
Match: A0A6H5JMZ6_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.910e-13
Identity = 83/218 (38.07%), Postives = 101/218 (46.33%), Query Frame = 0
Query:   31 SDAPMTQAHVRVPDSV-DRSEWLKL--RSRR------GSG-------RRRASSASATPPTLGATPPSHSRKMSMDSTTSSLATETS-LRSAMST-----------------------PPQRGNNDERVRRSVTFAVDDHDHGRHRPSLDSEPRRRTASAAASSAQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKPCAG 199
            SDAP+ QA VR+P+S  DR EWLK   +SRR      GSG       RRR SS         +      R  S DS+ +   ++TS + S +ST                       P     + +R RRS         HG    S  S      +SA + S Q CGVC AEFTR RRPHRCR C +AVCA+CSP RLP         KRTC+ CAG
Sbjct:   35 SDAPLLQARVRIPESATDRREWLKQHSQSRRRQQPSPGSGLKTPHDGRRRPSSRFRPHAHAASNSEFRERTTSRDSSVAGGESDTSSVNSRLSTVSTPEISQRQRKMLQQRHQQVVGPASVAGSPDRTRRSRV------PHGSITRSSSSASTSVVSSAPSLSQQSCGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCAG 246          
BLAST of mRNA_E-fasciculatus_F_contig10515.411.1 vs. uniprot
Match: D8LNU4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU4_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 3.200e-10
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0
Query:  147 ASAAASSAQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKPCAG 199
            +SA + S Q CGVC AEFTR RRPHRCR C +AVCA+CSP RLP         KRTC+ CAG
Sbjct:   45 SSAPSLSQQSCGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCAG 106          
BLAST of mRNA_E-fasciculatus_F_contig10515.411.1 vs. uniprot
Match: D8LGV1_ECTSI (FYVE, RhoGEF and PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV1_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 2.190e-8
Identity = 87/275 (31.64%), Postives = 115/275 (41.82%), Query Frame = 0
Query:   26 PPVMVSDAPMTQAHVRVPDS-----VDRSEWLKLRSRRGSGRRRASSASATPPTLGATPPSHSRKMSM----DSTTSSLATETSLRSAMSTPPQRGNN--------------------DERVRRSVTFAV---------------DDHDHGRHRPS--------LDSEPR---RRTASAAASSAQQ-------CGVCRAEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKPCAGDSAIPRVFPVVSPARGRVSPYALAEETAAS 229
            P   VSDAP+ QA V++PDS     +DR +WLK +S+    R++  S S +         S+  ++S     DS TSS+A+ +S  S +STP   G                         V R     V                       R S        + + PR    RT S+++ S++        C VC AEFT+ RRPHRCR C + VCA CSPARLP         KRTCK C GD A     P+V  A     P A+    A S
Sbjct:  130 PAAAVSDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRS---------SYDSEVSSLAGDDSDTSSVASTSSRLSIVSTPEISGRKWKTRQXXXXXXXXXXXXXXXXXXVGRPAATPVVGXXXXXXXXXXXXXXXXXXXXXRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAA--AAPLVGAAAPSRRPNAVGAAAAPS 393          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10515.411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJP7_ECTSI6.460e-21868.26Rho guanine nucleotide exchange factor n=1 Tax=Ect... [more]
A0A6H5KYW1_9PHAE3.570e-20464.52FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JMZ6_9PHAE2.910e-1338.07FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNU4_ECTSI3.200e-1061.29FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGV1_ECTSI2.190e-831.64FYVE, RhoGEF and PH domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 143..203
e-value: 8.5E-5
score: 30.7
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 152..191
e-value: 1.9E-9
score: 37.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 138..203
e-value: 3.0E-8
score: 35.3
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 151..197
score: 9.092
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 152..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10515contigE-fasciculatus_F_contig10515:85..3180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10515.411.1mRNA_E-fasciculatus_F_contig10515.411.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10515 85..3362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10515.411.1 ID=prot_E-fasciculatus_F_contig10515.411.1|Name=mRNA_E-fasciculatus_F_contig10515.411.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=597bp
MDNLQRDKGSMHTSAKNIDPAAARVPPVMVSDAPMTQAHVRVPDSVDRSE
WLKLRSRRGSGRRRASSASATPPTLGATPPSHSRKMSMDSTTSSLATETS
LRSAMSTPPQRGNNDERVRRSVTFAVDDHDHGRHRPSLDSEPRRRTASAA
ASSAQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKPCAGD
SAIPRVFPVVSPARGRVSPYALAEETAASATRAARRSVGGNTPVVVGVPA
ESASARGAARAAAVVDVGRVEGVGRAAAEEGSRSLDVAGNMRLRVPVSED
HVGKGEPEHPRSLGGEEGLGVSGSADAVGESEPRGSSSLRDMSQGREVGR
SKGPSVVGGHQVGRLDRVDGACRGSNVDACGSATRAEGGTQLSPTASSRN
DSPCFVAGRTASETTGQFLPGSTAAGWDGRLPPTVTPGLHGSLGLEAAAT
TDGAGAHQAGVVVDGGSMPRDERAMSPASGEEISPEEEEEEHRVSIATGN
EEVTAVLEVEVDPEVLSAPVPVSLPHPPPATASEATHLCIPLEATEGTRE
SPPSLPEGEGQTKIAPLGVLKRDPREEGGGVGSAPLRHRGPVEEDGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR017455Znf_FYVE-rel
IPR013083Znf_RING/FYVE/PHD
IPR000306Znf_FYVE