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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-17_001620.1 |
| Exons | 6 |
| Model size | 1996 |
| Cds size | 1584 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1597.4086.1 >prot_E-fasciculatus_F_contig1597.4086.1 ID=prot_E-fasciculatus_F_contig1597.4086.1|Name=mRNA_E-fasciculatus_F_contig1597.4086.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=528bp
MMRPGSAGIGDPRDHTTGEGNTEQELLLKIGLLAKHHARNVQALNRLRST
SAPPTTAWDRVAVPPPIEGPNPVQLRRRVTPKGNPEQKRTRPHCHSFSPD
RVFTRVVDSSASKKKLQPTVVKPFRGMETHVAAWTRKMRTYEELELQTKK
DKEEAKARDRERLITAINDGREFSGVITRSNEMMARRRQKETEAEDDEAR
RSREFKARPLHIDNEDWQTIKDRQSLRRKQRIQMRMDLMSSLSYLPRRMA
MHALKRKAATSTTAGIPEKGDGPSENEARMRYKAVPPEQIREVLARRQRL
WDQQLAAARRKKKPVVPQVLPMEERENVYRQRAKERARREQEKPLSEEIK
QRPRRKNVPLAATVPVVPRSTNSFSLKTAHVRARLEKEKSDLKRQKQEEL
ARRTRQQAMSKTISDVMRRMDSQQTRLAHRPTAAEARQTARESQERYHVC
LKENKQKLEQATRDAPTLWERHDAEIRKEAAKRIALSTIAERVFGAGSVA
VERENWRGSTVDNFFDEEERALLCCAD* back to topmRNA from alignment at E-fasciculatus_F_contig1597:286..3681+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1597.4086.1 ID=mRNA_E-fasciculatus_F_contig1597.4086.1|Name=mRNA_E-fasciculatus_F_contig1597.4086.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3396bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1597:286..3681+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCCAGTCCTACTGCGAATGTCACGGGATGTCATGATAGCACGACAGCCC
GACCATTGCTCTCGGAGAGGCCCATCTAAAAGGAGTAGGATTGCTGGCGG
TTATACCGTGTGCTCGACTTCTTTAATTCCAACTTCGTCGATCGCAGAAA
GAGCTCTCCGTTCGTATGCAACACGCGCCATCGGACGGGAGGTGTGCGCA
TGATAGACTACAGCAGTAAATGCTCAATATTCATGTTTTCAACAAAATAG
CTGTATCTGGTGCTTGGATCCAGCTTGGGTCTGGTGTTAGTAGGAGCTGG
AACAACGAGGACTCCGCATCACCACAAACGGCCGTCGACTGAGGCCGAGT
CGGCCCATCTACAGCACGCTTCTGATGCCCTCGGTACTCCGCCGGCGAAT
TCGGACACGAAGATGATGCGTCCTGGATCCGCGGGAATAGGGGACCCACG
AGACCATACTACTGGTGAAGGGAACACTGAACAAGAATTACTACTGAAAA
TTGGTCTCCTTGCCAAGCATCATGCTAGAAACGTCCAAGCTCTCAACAGG
TTGAGGAGCACCAGCGCACCGCCGACAACGGCATGGGATCGTGTCGCCGT
TCCACCACCGATCGAAGGCCCCAATCCTGTCCAACTTAGAAGACGAGTAA
CACCAAAGGGCAATCCTGAACAGAAAAGGACTCGTCCACACTGTCATTCA
TTCTCACCCGACCGCGTCTTCACTAGAGTTGTCGATTCTTCGGCGAGCAA
GAAGAAGCTGCAGCCCACAGTGGTTAAGCCGTTCCGCGGTATGGAGACTC
ATGTAGCCGCCTGGACCAGGAAAATGAGGACGTATGAGGAGGTGAGCTAG
TTTCCGTGGTGAGGATATTAGGCTCGAATTGAAATGAAGCATCAGGTACG
ATGGGCTGGAACTGGAGCGTTGCCCCTGCTATGCGACTGGTGCGGTTGGT
TGTGACCACAGCGTCAGTATAACCCTAATAGGCAAATACTGTTCCGTAAT
ATTGTCACCTGCCACCAACCTCAAACCATCACCTTAGCTTGAGCTGCAAA
CGAAGAAGGACAAGGAGGAAGCGAAGGCCAGAGATCGCGAGCGTCTCATC
ACGGCTATCAATGACGGAAGGGAGTTTTCCGGTGTCATTACTCGATCGAA
TGAGATGATGGCGCGACGCCGACAAAAGGAGGTGAGCCACAAGATCCCGA
TGTTCCACGGCACCTTCCTTTGTGGCGGCGTGGGCGAGGAGAGTGTGGCA
TGTATTTAAGCATTTACCTTGGGAACATCAGTGGGTTAACACAAGAACCC
TCGGACCCGCCCTAAGTTGTGCTCCACACAAATCCATACAGATGTGTCAC
AATATCTGTTCTCGTTGTTACGGTGGGCGAGCTGCATTTCTTTCGTTGAT
GTGTCGATGGCGATTTGAGACCTATTCGACCCGACGAAGAGTGCTGCTGA
GCGATGGCAAATGCATGTACGTTGTAATGCCGACGATCACGTGACGATGC
GGTGGGCACGGGCAAATGTTTTGTGATTTGATGGGGCATAGAAATCCTTC
CCCAACACAAAAGCATGTTAGTGCATTGGAAGAAGAGCCATTCATTATCT
CCTATATTTGGTGTAGTTGCACGCTTGTAGCGGACGTACATGATGCGACG
ATACTATTACACAAGAGACCCGCTGCATGTTTTATTTTTTGATGCGAACG
AATCCACTGGGTGAAGCCAGAACATTCCTAACTGTGGGACTCGTTTCACG
AAGCAGACAGAAGCGGAGGATGACGAAGCAAGGCGAAGTCGTGAATTCAA
GGCTCGCCCTCTGCACATCGACAATGAGGACTGGCAAACAATCAAGGATA
GACAAAGTTTAAGGCGGAAGCAGAGGATCCAGATGCGGATGGACTTGGTG
AGTGAGGTCGTCAGTCTGGTGTGGCACCGTCAGCCCTGCCCCACCATCGT
TCCCTCCTCCGCCGACTGGCGACCGACAGGAGAAGCAGTGTTTTCTGGGA
CGAACTTGAGTACAAGAGTGGAACTGCATGTCATCTTTCCCGTTGTGGAC
GTGACGTGCTGTGCTAATCGTGTGTGTTCTACTTGTACTGTAAACAGCTT
TCCATCCTAAAAATCGGCACAGGTCCATATGATTTCGGACAGGTTTCATG
ACAACAATCGTGTCGGCTGCAATTCCAACTTTTGGTCGCCCTGTGGCAGA
TGTCGTCTCTCTCCTATCTCCCAAGGCGTATGGCGATGCATGCGCTGAAA
CGCAAGGCTGCAACGTCCACCACCGCCGGGATCCCTGAGAAAGGAGATGG
CCCAAGTGAGAATGAAGCTCGCATGAGGTATAAAGCGGTTCCACCCGAGC
AGATCCGAGAAGTGTTGGCGAGAAGGCAGCGCCTATGGGATCAGCAGCTT
GCTGCGGCCAGACGGAAAAAGAAACCGGTGGTACCTCAGGTGTGTTACCC
CGTTCTCCTGTTTATTTCAGTTCTTGGTCGGAGGCTGCACTCGTTGCAGC
TCAGACAAATTAGTAACCATCGTTTGTCAAACACTGGTCAACATGTGCCT
GCTGTACCTATAGGTTCTACCCATGGAAGAGAGGGAAAACGTATACCGAC
AAAGAGCAAAAGAGCGCGCTCGACGGGAGCAAGAGAAACCTCTCTCGGAG
GAAATCAAACAGCGTCCTCGGAGGAAGAACGTGCCTTTAGCAGCTACCGT
GCCCGTTGTACCCCGCAGCACAAACAGCTTCTCTCTTAAGACGGCACACG
TGCGAGCCAGGCTGGAGAAAGAGAAGAGCGATCTCAAACGACAAAAACAA
GAGGAGTTGGCGAGGCGTACCAGGCAGCAAGCAATGAGCAAGACTATCTC
TGACGTAATGAGGCGGATGGATTCTCAGCAAACGAGACTAGCTCATCGAC
CGACAGCCGCTGAGGCTCGTCAAACGGCCCGGGAATCTCAAGAAAGATAT
CATGTCTGTTTGAAAGAGAACAAGCAGAAGCTGGAACAGGTGCGTGCTGA
TGCGCCAGCAGTCGCTGTAAGGACTGCAGGTTGTGCCGAGCTCGCTTTCT
TCGACTACTGGCTGGGAGTTTACGACAACACATGACTTAGTGCAGACAAA
CACGCAATTTTTGGCTGTTGACGAGAAAATGAGCATCAACGAGCCGCACT
CCACAACAACCTGATATGCACCACCCTTTCTTCGCTGCGCAGGCCACTCG
CGATGCCCCTACACTGTGGGAGAGGCACGACGCTGAGATTCGCAAGGAGG
CAGCAAAACGTATCGCATTGTCGACTATCGCAGAAAGAGTATTTGGAGCT
GGATCGGTGGCGGTGGAGCGTGAAAACTGGAGGGGGTCTACTGTTGACAA
TTTTTTTGATGAAGAAGAGCGTGCACTTTTGTGTTGTGCGGATTAG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1597:286..3681+ >mRNA_E-fasciculatus_F_contig1597.4086.1 ID=mRNA_E-fasciculatus_F_contig1597.4086.1|Name=mRNA_E-fasciculatus_F_contig1597.4086.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3168bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1597:286..3681+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATGCGTCCTGGATCCGCGGGAATAGGGGACCCACGAGACCATACTAC
TGGTGAAGGGAACACTGAACAAGAATTACTACTGAAAATTGGTCTCCTTG
CCAAGCATCATGCTAGAAACGTCCAAGCTCTCAACAGGTTGAGGAGCACC
AGCGCACCGCCGACAACGGCATGGGATCGTGTCGCCGTTCCACCACCGAT
CGAAGGCCCCAATCCTGTCCAACTTAGAAGACGAGTAACACCAAAGGGCA
ATCCTGAACAGAAAAGGACTCGTCCACACTGTCATTCATTCTCACCCGAC
CGCGTCTTCACTAGAGTTGTCGATTCTTCGGCGAGCAAGAAGAAGCTGCA
GCCCACAGTGGTTAAGCCGTTCCGCGGTATGGAGACTCATGTAGCCGCCT
GGACCAGGAAAATGAGGACGTATGAGGAGATGATGCGTCCTGGATCCGCG
GGAATAGGGGACCCACGAGACCATACTACTGGTGAAGGGAACACTGAACA
AGAATTACTACTGAAAATTGGTCTCCTTGCCAAGCATCATGCTAGAAACG
TCCAAGCTCTCAACAGGTTGAGGAGCACCAGCGCACCGCCGACAACGGCA
TGGGATCGTGTCGCCGTTCCACCACCGATCGAAGGCCCCAATCCTGTCCA
ACTTAGAAGACGAGTAACACCAAAGGGCAATCCTGAACAGAAAAGGACTC
GTCCACACTGTCATTCATTCTCACCCGACCGCGTCTTCACTAGAGTTGTC
GATTCTTCGGCGAGCAAGAAGAAGCTGCAGCCCACAGTGGTTAAGCCGTT
CCGCGGTATGGAGACTCATGTAGCCGCCTGGACCAGGAAAATGAGGACGT
ATGAGGAGCTTGAGCTGCAAACGAAGAAGGACAAGGAGGAAGCGAAGGCC
AGAGATCGCGAGCGTCTCATCACGGCTATCAATGACGGAAGGGAGTTTTC
CGGTGTCATTACTCGATCGAATGAGATGATGGCGCGACGCCGACAAAAGG
AGCTTGAGCTGCAAACGAAGAAGGACAAGGAGGAAGCGAAGGCCAGAGAT
CGCGAGCGTCTCATCACGGCTATCAATGACGGAAGGGAGTTTTCCGGTGT
CATTACTCGATCGAATGAGATGATGGCGCGACGCCGACAAAAGGAGACAG
AAGCGGAGGATGACGAAGCAAGGCGAAGTCGTGAATTCAAGGCTCGCCCT
CTGCACATCGACAATGAGGACTGGCAAACAATCAAGGATAGACAAAGTTT
AAGGCGGAAGCAGAGGATCCAGATGCGGATGGACTTGACAGAAGCGGAGG
ATGACGAAGCAAGGCGAAGTCGTGAATTCAAGGCTCGCCCTCTGCACATC
GACAATGAGGACTGGCAAACAATCAAGGATAGACAAAGTTTAAGGCGGAA
GCAGAGGATCCAGATGCGGATGGACTTGATGTCGTCTCTCTCCTATCTCC
CAAGGCGTATGGCGATGCATGCGCTGAAACGCAAGGCTGCAACGTCCACC
ACCGCCGGGATCCCTGAGAAAGGAGATGGCCCAAGTGAGAATGAAGCTCG
CATGAGGTATAAAGCGGTTCCACCCGAGCAGATCCGAGAAGTGTTGGCGA
GAAGGCAGCGCCTATGGGATCAGCAGCTTGCTGCGGCCAGACGGAAAAAG
AAACCGGTGGTACCTCAGATGTCGTCTCTCTCCTATCTCCCAAGGCGTAT
GGCGATGCATGCGCTGAAACGCAAGGCTGCAACGTCCACCACCGCCGGGA
TCCCTGAGAAAGGAGATGGCCCAAGTGAGAATGAAGCTCGCATGAGGTAT
AAAGCGGTTCCACCCGAGCAGATCCGAGAAGTGTTGGCGAGAAGGCAGCG
CCTATGGGATCAGCAGCTTGCTGCGGCCAGACGGAAAAAGAAACCGGTGG
TACCTCAGGTTCTACCCATGGAAGAGAGGGAAAACGTATACCGACAAAGA
GCAAAAGAGCGCGCTCGACGGGAGCAAGAGAAACCTCTCTCGGAGGAAAT
CAAACAGCGTCCTCGGAGGAAGAACGTGCCTTTAGCAGCTACCGTGCCCG
TTGTACCCCGCAGCACAAACAGCTTCTCTCTTAAGACGGCACACGTGCGA
GCCAGGCTGGAGAAAGAGAAGAGCGATCTCAAACGACAAAAACAAGAGGA
GTTGGCGAGGCGTACCAGGCAGCAAGCAATGAGCAAGACTATCTCTGACG
TAATGAGGCGGATGGATTCTCAGCAAACGAGACTAGCTCATCGACCGACA
GCCGCTGAGGCTCGTCAAACGGCCCGGGAATCTCAAGAAAGATATCATGT
CTGTTTGAAAGAGAACAAGCAGAAGCTGGAACAGGTTCTACCCATGGAAG
AGAGGGAAAACGTATACCGACAAAGAGCAAAAGAGCGCGCTCGACGGGAG
CAAGAGAAACCTCTCTCGGAGGAAATCAAACAGCGTCCTCGGAGGAAGAA
CGTGCCTTTAGCAGCTACCGTGCCCGTTGTACCCCGCAGCACAAACAGCT
TCTCTCTTAAGACGGCACACGTGCGAGCCAGGCTGGAGAAAGAGAAGAGC
GATCTCAAACGACAAAAACAAGAGGAGTTGGCGAGGCGTACCAGGCAGCA
AGCAATGAGCAAGACTATCTCTGACGTAATGAGGCGGATGGATTCTCAGC
AAACGAGACTAGCTCATCGACCGACAGCCGCTGAGGCTCGTCAAACGGCC
CGGGAATCTCAAGAAAGATATCATGTCTGTTTGAAAGAGAACAAGCAGAA
GCTGGAACAGGCCACTCGCGATGCCCCTACACTGTGGGAGAGGCACGACG
CTGAGATTCGCAAGGAGGCAGCAAAACGTATCGCATTGTCGACTATCGCA
GAAAGAGTATTTGGAGCTGGATCGGTGGCGGTGGAGCGTGAAAACTGGAG
GGGGTCTACTGTTGACAATTTTTTTGATGAAGAAGAGCGTGCACTTTTGT
GTTGTGCGGATTAGGCCACTCGCGATGCCCCTACACTGTGGGAGAGGCAC
GACGCTGAGATTCGCAAGGAGGCAGCAAAACGTATCGCATTGTCGACTAT
CGCAGAAAGAGTATTTGGAGCTGGATCGGTGGCGGTGGAGCGTGAAAACT
GGAGGGGGTCTACTGTTGACAATTTTTTTGATGAAGAAGAGCGTGCACTT
TTGTGTTGTGCGGATTAG back to top
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