prot_E-fasciculatus_F_contig10509.407.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10509.407.1
Unique Nameprot_E-fasciculatus_F_contig10509.407.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length215
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.740e-9
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:    5 GKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 44
            G+  EA PLYLRAIE+GE KLG +HP LATWLNN+A LLR
Sbjct:    8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLR 47
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.050e-8
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    4 QGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRA 40
            QGKYEEA PLYLRA+EIGE  LG +HP LA WLNN+A
Sbjct:    7 QGKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKA 43
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 7.760e-8
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    5 GKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 44
            GKY EA PLYLRAI+IG+  LG +HP LA WLNNRA LL+
Sbjct:   10 GKYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRAGLLK 49
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.810e-7
Identity = 31/43 (72.09%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELL 43
            L   GKY EA PLYLRAIEIGE  LG +HP LAT LNNRA LL
Sbjct:  609 LELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.390e-7
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    4 QGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 44
            +G + EA P  LRAIEIGE  LG EHP LA WLNNRAELLR
Sbjct:  643 EGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.680e-7
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:  179 AIPLLERALRIRTKKLGDNHPDTVSTRDRLELVREK 214
            A+PLLERAL IR KKLG+NHPDTVST++ L++VR K
Sbjct:    7 AVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRRK 42
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 54.7 bits (130), Expect = 1.120e-6
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    3 TQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAEL 42
            +QGKYEEA PLY RA++I ET LG +HP +AT LNN A L
Sbjct:    3 SQGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A7S3NLU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.420e-6
Identity = 26/36 (72.22%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    1 LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWL 36
            L +QGKY EA PLY RAIEIGE  LG  HP LATWL
Sbjct:    9 LESQGKYNEAKPLYERAIEIGEKTLGPNHPNLATWL 44
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 4.930e-6
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    4 QGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLR 44
            +GKY++A PLY+RAI IGE  LG EHP LA WLN  A LL+
Sbjct:   12 EGKYDDAEPLYVRAIAIGEKSLGPEHPDLAVWLNYWAGLLK 52
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BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.030e-5
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELL 43
            +  QGKY EA PL LRA++IG++ LG +HP LA WL NRA LL
Sbjct:  550 ITLQGKYAEADPLILRAMDIGKSPLGPDHPDLALWLGNRACLL 592
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10509.407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LLM3_ECTSI4.740e-972.50Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5K0C4_9PHAE1.050e-875.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L045_9PHAE7.760e-870.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6W2_ECTSI1.810e-772.09NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JJK0_9PHAE2.390e-770.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7J8_9PHAE2.680e-772.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D295281.120e-665.00tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A7S3NLU4_9STRA1.420e-672.22Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A6H5K4D0_9PHAE4.930e-663.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2T5_9PHAE1.030e-560.47PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=E... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 71..88
score: 37.78
coord: 6..24
score: 40.53
coord: 115..135
score: 53.81
coord: 150..171
score: 25.45
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 33..66
e-value: 3.7
score: 16.5
coord: 75..108
e-value: 1.2
score: 18.2
coord: 159..193
e-value: 65.0
score: 7.8
coord: 117..150
e-value: 29.0
score: 10.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 148..215
e-value: 2.4E-12
score: 48.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..145
e-value: 9.1E-50
score: 171.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..64
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 69..207
NoneNo IPR availablePFAMPF13424TPR_12coord: 73..148
e-value: 5.5E-17
score: 61.8
coord: 158..208
e-value: 1.6E-7
score: 31.5
coord: 2..62
e-value: 3.1E-12
score: 46.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 3..62
coord: 60..148
coord: 106..206
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..108
score: 11.652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10509contigE-fasciculatus_F_contig10509:76..2336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10509.407.1mRNA_E-fasciculatus_F_contig10509.407.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10509 76..2336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10509.407.1 ID=prot_E-fasciculatus_F_contig10509.407.1|Name=mRNA_E-fasciculatus_F_contig10509.407.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=215bp
LATQGKYEEAAPLYLRAIEIGETKLGTEHPKLATWLNNRAELLRVQGKYA
EADPLYLRSIEIGEKTLGPDHPDLATWLSNRAELLRVQGKYAEADPLYLR
AIEIGEKTLGPDHPDLATRLNNRAGLLRAQGKYAETEALYERSQAISQKG
LDAEHPHVATVLHNRAALLMASEKYTEQAIPLLERALRIRTKKLGDNHPD
TVSTRDRLELVREKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR002151Kinesin_light