prot_E-fasciculatus_F_contig15919.4052.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15919.4052.1
Unique Nameprot_E-fasciculatus_F_contig15919.4052.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length803
Homology
BLAST of mRNA_E-fasciculatus_F_contig15919.4052.1 vs. uniprot
Match: A0A6H5L6D8_9PHAE (GCP_N_terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D8_9PHAE)

HSP 1 Score: 886 bits (2289), Expect = 2.350e-303
Identity = 610/849 (71.85%), Postives = 637/849 (75.03%), Query Frame = 0
Query:   19 KDGVGLLLPSALPALEDVDEGGTTREWLQAFEDDGEGSPRADGCATGEIEAERNGHWGKVEDKGASTQLIQSLAPSYPPSTSPNTGVDRKNPTRRASRPAADDRSEYLYAARHNYGAPCIGADIRSLGGRRGACGGDVDGSSFLRPCQTLEACQTRGGEAVGRRR-SIPEAEVVRAALHMLSGLSGDIFVRRVSGDASDGGGEQHPQQARHGAVGTRGTGGGGXXXXXXXXXXXRWGVVSGSTRAARRQEWFSLSESAASDLAVASLSPEALAGVLEDLVRVGSTAEYLRAFVADAEGSASVAAEAAAATALRQS-------------APHGQGDGGDAAAEHDCSSSS-----------------------------------------------GSGETIVGLLSLLRPEAESLELTRQLVEDGTGWWVATPPEXXQGVWPQXXXXXXXTGDTHAERRVGGGSGAGLHERTGRLLSVLHDTLVSSALVGIDP-PEKKSRGVGGTEALAPRRRGWLLHVFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXHNRQTPAVSRDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREPGTGAMASPGSETFSLAETLSDSLRRLAGRVRRANDAGRSRKKDQDDGAGCTGVG--DHRSGRXXXXXXXXXXXXXXXXXXXXXXXXXXSSGLDGIIDLEESDGGKDGDRRNSASTEGEEGATSPAGTSGEGVTTEMGGAEVEATAATDTNGESGSVSAAPPESGDVTNDGSDGGDSS 803
            +DGVG L  SALP +EDVDEGGT REWLQAFEDDGEGSPRADGC  GEIE ER GH GKVE+ GASTQL + LAPSY P +SPNTGVD KN TRRAS P A         ARHNYGAPCIGADIR+LGGRRGA  GDVDG+SFLRPCQTLEACQTRGGEAVGRRR SIPEAEVVRAALHML+GLSGDIFVRRV+GDASD GGEQ PQ+ RHGA GTRGTG              RWGVV+GS  A R QEWFSLSESAASDLAVASLSPEALAGVLEDL+RVGSTAEYLRAFVADAEGSASVAAEA                      A    G G +   +H  ++ +                                                SGETIVGLLSLLRPEAESLELTRQLVEDG GWWVATP  XX+GVWP+       TGDT+AER VGGGSGAGLHERTGRLLSVLHD LVSSALVGI P P +KSRGVG TEALAPRRRGWLLHVFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXX         HNRQ  AV  DPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R+ GTGAM+SPGSETFSLAETLS+SLR+LAGRVRRANDAG SRKKDQDDGAGCTG G  D RSG        XXXXXXXXXXXXX      SSGL GI+DLEES GGK GD RNSASTE EEGATSPA            G E EATAAT+ N ESGSVS A PE  DVTNDGSDGGD S
Sbjct:  218 EDGVGSL-SSALPGVEDVDEGGT-REWLQAFEDDGEGSPRADGCTAGEIETERFGHRGKVENNGASTQLAEPLAPSYSPPSSPNTGVDSKNLTRRASHPPA---------ARHNYGAPCIGADIRNLGGRRGARDGDVDGASFLRPCQTLEACQTRGGEAVGRRRRSIPEAEVVRAALHMLAGLSGDIFVRRVNGDASDTGGEQLPQKGRHGAAGTRGTGXXXRTGGGSSGPSRRWGVVTGSASARRGQEWFSLSESAASDLAVASLSPEALAGVLEDLLRVGSTAEYLRAFVADAEGSASVAAEAXXXXXXXXXXXXXXXXXXXXXXASKSYGRGKERGPKHGLTTQAFVACVRRHLESFEDTVARRDRWLYRRQQGQGXXXXXXXXXXXXXXXXXSGETIVGLLSLLRPEAESLELTRQLVEDGAGWWVATPXXXXEGVWPRNRRRRR-TGDTNAERHVGGGSGAGLHERTGRLLSVLHDALVSSALVGIGPTPPEKSRGVGDTEALAPRRRGWLLHVFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXXADNIGG---HNRQATAVGGDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ERKAGTGAMSSPGSETFSLAETLSESLRQLAGRVRRANDAGPSRKKDQDDGAGCTGRGRGDRRSG-------GXXXXXXXXXXXXXAVSPVSSSGLGGIVDLEESRGGKHGDGRNSASTESEEGATSPAXXXXXXXXXXXXGTEAEATAATEKNRESGSVSVAAPEGEDVTNDGSDGGDCS 1043          
BLAST of mRNA_E-fasciculatus_F_contig15919.4052.1 vs. uniprot
Match: D7FNI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI5_ECTSI)

HSP 1 Score: 843 bits (2178), Expect = 9.940e-287
Identity = 578/712 (81.18%), Postives = 593/712 (83.29%), Query Frame = 0
Query:   19 KDGVGLLLPSALPALEDVDEGGTTREWLQAFEDDGEGSPRADGCATGEIEAERNGHWGKVEDKGASTQLIQSLAPSYPPSTSPNTGVDRKNPTRRASRPAADDRSEYLYAARHNYGAPCIGADIRSLGGRRGACGGDVDGSSFLRPCQTLEACQTRGGEAVGRRR-SIPEAEVVRAALHMLSGLSGDIFVRRVSGDASDGGGEQHPQQARHGAVGTRGTGGGGXXXXXXXXXXXRWGVVSGSTRAARRQEWFSLSESAASDLAVASLSPEALAGVLEDLVRVGSTAEYLRAFVADAEGSASVAAEAAAATALRQSAPHGQGDGGDAAAEHDCSS-SSGSGETIVGLLSLLRPEAESLELTRQLVEDGTGWWVATPPEXXQGVWPQXXXXXXXTGDTHAERRVGGGSGAGLHERTGRLLSVLHDTLVSSALVGIDP-PEKKSRGVGGTEALAPRRRGWLLHVFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXHNRQTPAVSRDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREPGTGAMASPGSETFSLAETLSDSLRRLAGRVRRANDAGRSRKKDQDDGAGCTGVGDHRSGRXXXXXXXXXXXXXXXXXXXXXXXXXXSSGLDGIIDLEES 727
            +DGVG    SALP +EDVDEGGT REWLQAFEDDGEGSPRA G   GEIEAER+G WGKVE+ GASTQL++ LAPSYPPS+SPNTGVD KN  RRAS P A         ARHNYG+PCIGADIRSLGGRRGA  GDV GSSFLRPCQTLEACQTRGG+AVGRRR SIPEAEVVRAALHML+GLSGDIFVRRV GDASD  GEQ  QQ RH AVG RGTG   XXXXXXXXXX RW VVSGS RA R QEWFSLSESAASDLAVASLSPEALAGVL DLVRVGST EYLRAFV DAEGSASVAAEAAAA  LRQ  P G G+G D A EHD SS SSGSGETIVGLLSLLRPEAESLELTRQLVEDG GWW      XX      XXXXXXXTG   AER VGGGSGAGLHERTGRLLSVLHD LVSSALVGI P P +KSRGVG T A APRRRGWLLH+FCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXX          HNRQ  AV RDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR+  TGAMASPGSETFSLAETLS+SLRRLA RVRRANDAG SRKKDQDDGAGCTG GD RSG XXXXXXXXXXXX              SSGLDGIIDLEES
Sbjct:  223 EDGVGSF-SSALPVVEDVDEGGT-REWLQAFEDDGEGSPRAAGYTAGEIEAERSGRWGKVENNGASTQLVEPLAPSYPPSSSPNTGVDSKNLARRASHPPA---------ARHNYGSPCIGADIRSLGGRRGAHDGDVHGSSFLRPCQTLEACQTRGGKAVGRRRRSIPEAEVVRAALHMLAGLSGDIFVRRVRGDASDTRGEQLSQQERHRAVGARGTGXXXXXXXXXXXXXDRWDVVSGSARARRGQEWFSLSESAASDLAVASLSPEALAGVLGDLVRVGSTVEYLRAFVTDAEGSASVAAEAAAAV-LRQRVPRGHGEGRDTAVEHDSSSTSSGSGETIVGLLSLLRPEAESLELTRQLVEDGAGWWXXXXXXXXXXXXXXXXXXXXXTG---AERHVGGGSGAGLHERTGRLLSVLHDALVSSALVGIGPTPPEKSRGVGDTAARAPRRRGWLLHMFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXADNIGG----HNRQATAVGRDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKARTGAMASPGSETFSLAETLSESLRRLAERVRRANDAGPSRKKDQDDGAGCTGRGDRRSGXXXXXXXXXXXXXAAVSPVS-------SSGLDGIIDLEES 908          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15919.4052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6D8_9PHAE2.350e-30371.85GCP_N_terminal domain-containing protein n=1 Tax=E... [more]
D7FNI5_ECTSI9.940e-28781.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availablePANTHERPTHR19302:SF33GAMMA-TUBULIN COMPLEX COMPONENT 5coord: 126..636
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 273..596
e-value: 1.4E-14
score: 54.4
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 126..636

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15919contigE-fasciculatus_F_contig15919:2..2890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15919.4052.1mRNA_E-fasciculatus_F_contig15919.4052.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15919 2..2890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15919.4052.1 ID=prot_E-fasciculatus_F_contig15919.4052.1|Name=mRNA_E-fasciculatus_F_contig15919.4052.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=803bp
EEEEEEEEEEEEEEEEEEKDGVGLLLPSALPALEDVDEGGTTREWLQAFE
DDGEGSPRADGCATGEIEAERNGHWGKVEDKGASTQLIQSLAPSYPPSTS
PNTGVDRKNPTRRASRPAADDRSEYLYAARHNYGAPCIGADIRSLGGRRG
ACGGDVDGSSFLRPCQTLEACQTRGGEAVGRRRSIPEAEVVRAALHMLSG
LSGDIFVRRVSGDASDGGGEQHPQQARHGAVGTRGTGGGGRTGGGSRGPG
GRWGVVSGSTRAARRQEWFSLSESAASDLAVASLSPEALAGVLEDLVRVG
STAEYLRAFVADAEGSASVAAEAAAATALRQSAPHGQGDGGDAAAEHDCS
SSSGSGETIVGLLSLLRPEAESLELTRQLVEDGTGWWVATPPEEEQGVWP
QNRRRRRRTGDTHAERRVGGGSGAGLHERTGRLLSVLHDTLVSSALVGID
PPEKKSRGVGGTEALAPRRRGWLLHVFCEVLAPYLRLVDSWITEGRLLDP
HGELFFSRIGGGGGADGHGRAVTAAAAAAAAAADNGGGHNRQTPAVSRDP
VVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGGGSSS
SASLGGGSRRDAGGFRRPGPPPPPSREPGTGAMASPGSETFSLAETLSDS
LRRLAGRVRRANDAGRSRKKDQDDGAGCTGVGDHRSGRGGSGGGGGGGGD
AAAAAATAAVSPVSSSGLDGIIDLEESDGGKDGDRRNSASTEGEEGATSP
AGTSGEGVTTEMGGAEVEATAATDTNGESGSVSAAPPESGDVTNDGSDGG
DSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
IPR041470GCP_N