mRNA_E-fasciculatus_F_contig15902.4045.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: D7G3X9_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X9_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 6.650e-161 Identity = 227/245 (92.65%), Postives = 236/245 (96.33%), Query Frame = 1
Query: 1 GFVVMTALTLQPKAIAIALAPFLGLNLIVVGLWGYISWSDPAGEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTARRNGGG--GAHSRSRFCGIG-GCGRRPPAVPTASTVQDVAGFSTPGRPRSNGSWGGAGMGAGVT 726
GFVV+T+LTL PKAIAIALAPFLGLN+IVVGLWGYISWSDPAGEGGCTLGRKRAETPHYC+YCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQR+AFGSLTASRI WG+FIAVAGWIAVSFVALAGFHTYLLL+GLGTYDWVVMQNQ+RQEKLTARR+ GG GA SR FCGIG GCGRRPPAVPTASTVQDVAGFSTPGRPRSNGSWGGAGMGAGVT
Sbjct: 23 GFVVLTSLTLDPKAIAIALAPFLGLNIIVVGLWGYISWSDPAGEGGCTLGRKRAETPHYCNYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQREAFGSLTASRITWGIFIAVAGWIAVSFVALAGFHTYLLLVGLGTYDWVVMQNQRRQEKLTARRSAGGAGGADSRPGFCGIGCGCGRRPPAVPTASTVQDVAGFSTPGRPRSNGSWGGAGMGAGVT 267
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: A0A6H5KKT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT8_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.190e-45 Identity = 68/76 (89.47%), Postives = 75/76 (98.68%), Query Frame = 1
Query: 1 GFVVMTALTLQPKAIAIALAPFLGLNLIVVGLWGYISWSDPAGEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSW 228
GFVV+T+LTL+PK IAIALAPFLGLN++VVGLWGY+SWSDPAGEGGCTLGRKRAETPHYC+YCRKTVRGFDHHCSW
Sbjct: 6 GFVVLTSLTLEPKTIAIALAPFLGLNIVVVGLWGYLSWSDPAGEGGCTLGRKRAETPHYCNYCRKTVRGFDHHCSW 81
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: A0A7S2RVY8_9STRA (Palmitoyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVY8_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.220e-33 Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 1
Query: 76 NLIVVGLWGYISWSDPAGEGGCT---LGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLT-VIWADEDDQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQ 519
+L+++ W I DP+ EGG L H+C CRK V GFDHHCSWLNTCI +RNYA FY L G+++YL TV + L V+W D + + FGS TA +A +FI ++G+++ FV+L GFHTYL+ G GT+ WV +Q++
Sbjct: 54 SLVLLASWLLIELVDPSVEGGMPCLCLDEDVRHFRHWCMICRKQVPGFDHHCSWLNTCIGSRNYAFFYTLACFGTVVYLMQTVVSVLVLVLWPSRDRREEFFGSNTAFLVAHIIFICISGFLSSLFVSLWGFHTYLVYKGKGTFLWVSVQHE 205
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: M4BBE7_HYAAE (Palmitoyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBE7_HYAAE) HSP 1 Score: 99.0 bits (245), Expect = 8.270e-21 Identity = 60/180 (33.33%), Postives = 90/180 (50.00%), Query Frame = 1
Query: 49 IALAPFLGLNLIVVGLWGYISWSDPAGEGG----------CT-LGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQRDA--FGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTARR 549
IA+A L + I+V W + DPA C L R E YC+ CRKTV G DHHC+WL TCI NY F+ + +G++ ++ A L ++W +DA FG L I+V + L GFH +L+++G GTYDW++ + Q+++ KL A++
Sbjct: 100 IAVAVHLVNSTILVTSWRFCETVDPAAHRNDVVPQNNGWWCVRLSGPRWEKTRYCALCRKTVPGMDHHCTWLQTCIGKANYVQFFTVACTGTVQFVLQVAYAILCLLWLHAHPMKDADVFGYLAKCCFFLCSVISVPCMF--MYFVLVGFHLWLMVLGYGTYDWMLRRRQEQRTKLEAKK 277
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: H3GXE4_PHYRM (Palmitoyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXE4_PHYRM) HSP 1 Score: 98.6 bits (244), Expect = 9.200e-21 Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = 1
Query: 49 IALAPFLGLNLIVVGLWGYISWSDPA---------GEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTARRN 552
+A+A + ++++V W DPA G G L R + YC+ CRK V G DHHC+WL TCI NYA F+ + +G++ ++ V A L ++W DA S I + +A++ + L GFH YL+L+G GTY+W++ + ++++ K A+++
Sbjct: 93 VAVAVHVVNSILLVTSWRSCETIDPAAAVEDSLPNGWCGVRLNGPRWDNTRYCALCRKAVPGLDHHCTWLQTCIGKANYAQFFTVACTGTVQFVLQVVYAALCLLWLHYHPLDDAGTSGYIVEICLIMCLAISVPCMFMYFVLLGFHLYLMLLGYGTYEWMLRRRKEQRAKQEAKKH 269
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: D0NA30_PHYIT (Palmitoyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0NA30_PHYIT) HSP 1 Score: 94.4 bits (233), Expect = 1.510e-19 Identity = 54/169 (31.95%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 76 NLIVVGLWGYISWSDPA---------GEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQRDA--FGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTARR 549
++I+V W DPA G G L R E YC+ CRK V G DHHC+WL TCI NYA F+ + +G++ ++ A L ++W DA FG + + + I+V + L GFH +L+++G GTY+W++ + + ++ KL A++
Sbjct: 52 SMILVTAWRSCETIDPAESVEDSLPNGWCGVRLTGPRWEKTRYCALCRKPVPGLDHHCTWLQTCIGKNNYAQFFTVACTGTMQFVLQVAYAVLGLMWLLYHPLDDAGGFGYVVEGSLIVCLVISVPCMF--MYFVLVGFHVWLMILGYGTYEWMLRRRKDQRAKLEAKK 218
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: G5AAL7_PHYSP (Palmitoyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AAL7_PHYSP) HSP 1 Score: 94.7 bits (234), Expect = 2.200e-19 Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 115 SDPAGEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQRDAFGSLTASRIAWGVFIAVAGWIAVS------FVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTAR 546
S P G G L R E YC+ CRK V G DHHC+WL TCI NYA F+ + +G+L ++ A L ++W + DA G+ + G IA +A+S + L GFH +L+++G GTY+W++ + ++++ KL A+
Sbjct: 115 SLPNGWCGVRLDGPRWEKTRYCALCRKAVPGLDHHCTWLQTCIGKANYAQFFTVACTGTLQFVLQVAYAALCLLWLHHNPLDDA-GAF--QYVVEGCLIAC---LAISVPCMFMYFVLLGFHLWLMVLGYGTYEWMLRRRKEQRAKLEAK 258
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: A0A0P1AX92_PLAHL (Palmitoyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX92_PLAHL) HSP 1 Score: 91.7 bits (226), Expect = 6.040e-19 Identity = 50/142 (35.21%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 115 SDPAGEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADED--DQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEK 534
S P G G L R E YC+ CRK+V G DHHC+WL TCI NYA F+ + +G++ +L V A L ++W D AF + + F+ + + FV L GFH +L+++G GTY+W++ + ++++ K
Sbjct: 35 SLPNGWCGVRLSGPRWEKTRYCAQCRKSVPGLDHHCTWLQTCIGKSNYAQFFTVACTGTIQFLLQVVYAGLCLLWLHNHLLDDAGAFDYVVVGCLVT-CFVTSFPCMLMYFVLL-GFHLWLMILGYGTYEWMLRRRKEQRAK 174
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: A0A225WTN9_9STRA (Palmitoyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WTN9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.510e-19 Identity = 47/147 (31.97%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 115 SDPAGEGGCTLGRKRAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADED--DQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTARR 549
S P G G L R + YC+ CRK V G DHHC+WL TCI NYA F+ + +G+L ++ + A L ++W + D +FG + + + I+V + L GFH +L+++G GTY+W++ + ++ K+ ++
Sbjct: 104 SLPNGWCGVQLSGPRWDKTRYCALCRKAVPGLDHHCTWLQTCIGRNNYAQFFTVACTGTLQFVLQVLYAALGLLWLHDHPLDDTGSFGYVVEGCLITCLVISVPCMF--MYFVLVGFHLWLMVLGYGTYEWMLRRRTDQRAKVAKKK 248
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Match: A0A5D6Y8R2_9STRA (Palmitoyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8R2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.130e-18 Identity = 55/184 (29.89%), Postives = 96/184 (52.17%), Query Frame = 1
Query: 16 TALTLQPKAIAIALAPFLGLNLIVVGLWGYISWSDPAGEGGCTLGRK----RAETPHYCSYCRKTVRGFDHHCSWLNTCISARNYAHFYLLGVSGSLLYLYMTVAATLTVIWADEDDQRDAFGSLTASRIAWGVFIA---VAGWIAVSFVALAGFHTYLLLMGLGTYDWVVMQNQKRQEKLTAR 546
+A+ L A+++ L F +++ W DPA + LG + R E YC++CRKTV G DHHC+WL TC+ NY F+++ +G++ +L + +T ++W + A GS T S + G+ +A ++ + + L GFH +L +G GT++W++ + +R AR
Sbjct: 98 SAVALTQVALSVHLVTF----AVLLTAWTSCERVDPAKDASGWLGIRLQGPRWEKARYCAFCRKTVPGLDHHCTWLQTCVGKANYVQFFVIACTGAVQFLSQVLFSTFCLVWLE---LPLAPGS-TLSAVVQGLLVACLAISVPCTIMYFILLGFHVWLSFLGYGTFEWMLRRRTQRSAARKAR 273 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15902.4045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15902.4045.1 >prot_E-fasciculatus_F_contig15902.4045.1 ID=prot_E-fasciculatus_F_contig15902.4045.1|Name=mRNA_E-fasciculatus_F_contig15902.4045.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=239bp MTALTLQPKAIAIALAPFLGLNLIVVGLWGYISWSDPAGEGGCTLGRKRAback to top mRNA from alignment at E-fasciculatus_F_contig15902:146..2709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15902.4045.1 ID=mRNA_E-fasciculatus_F_contig15902.4045.1|Name=mRNA_E-fasciculatus_F_contig15902.4045.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2564bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15902:146..2709- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15902:146..2709- >mRNA_E-fasciculatus_F_contig15902.4045.1 ID=mRNA_E-fasciculatus_F_contig15902.4045.1|Name=mRNA_E-fasciculatus_F_contig15902.4045.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1434bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15902:146..2709- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |