mRNA_E-fasciculatus_F_contig15898.4040.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: D7FXS1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS1_ECTSI) HSP 1 Score: 191 bits (486), Expect = 6.630e-53 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 1
Query: 10 EQAHKAEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
EQAHKAEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLAR+RFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL
Sbjct: 859 EQAHKAEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARLRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 953
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A835YIY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIY8_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.790e-25 Identity = 57/90 (63.33%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 25 AEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
AEKI R RL E ETP M ALGDLTQDP+ ++RAW LSGGR ARAK +L R F +G YE A H++ A+AVKPLL AWF+LG A MRL
Sbjct: 176 AEKIVRARLAEAETPQMRCALGDLTQDPQHYERAWRLSGGRLARAKTALGRYFFFKGDYETAVAHFQAAVAVKPLLPRAWFTLGAALMRL 265
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: I2CPX2_NANGC (Tetratricopeptide repeat domain 27 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPX2_NANGC) HSP 1 Score: 94.7 bits (234), Expect = 9.040e-21 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 22 KAEKIARERLLEKETPGMLAALGDLTQDPE-CWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARM 288
+AE + RERL +ETP M AALGDLT D C++RAW LSGGRYARAK SL R F EGK+ E H A+ + PL+ WF +G+A M
Sbjct: 39 RAESLVRERLRTQETPAMWAALGDLTHDEGGCYERAWVLSGGRYARAKRSLGRRAFQEGKWAETVEHLTAAVTISPLMPDVWFLMGMADM 128
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A7S1US04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1US04_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.190e-19 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 25 AEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
AEKI RERL + ETP M +ALGD+T DP+ + +A DLS GR+A A +L + F +G+ EA HY+ AL VKPL+ AWF G M+L
Sbjct: 45 AEKIVRERLADIETPRMWSALGDITNDPQFYYKALDLSKGRFANAHVALGKYHFDKGELAEAGVHYKAALKVKPLMPRAWFRFGTISMQL 134
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A7R9Y971_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y971_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.760e-17 Identity = 48/96 (50.00%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 22 KAEKIARERL-----LEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
+AEK+ R +L +E TP ML +LGD+TQDP ++RAW++S GRYARAK L R GK E+A + AL VKPLL WF LG MRL
Sbjct: 233 RAEKLLRRQLEECGGVENATPKMLVSLGDVTQDPSFYERAWEVSHGRYARAKVQLGIARLDAGKLEDARDAFTAALRVKPLLPEIWFKLGAVAMRL 328
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: K0TD47_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TD47_THAOC) HSP 1 Score: 85.9 bits (211), Expect = 4.900e-16 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 22 KAEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
+AE++ R RL E+ETP M AALGDLT DP ++RA +LS GRY A +L R F G ++A GH+ + L +KPL+ WF +G M+L
Sbjct: 708 RAEEVVRRRLSERETPRMWAALGDLTSDPSHFERALELSNGRYYDAHVALGRYWFERGDLKKATGHFLDGLDIKPLMPHVWFRVGTISMQL 798
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A7S4HNZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HNZ1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.370e-16 Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 25 AEKIARERLLEK-ETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
AE++ R+RL ETP M ALGDLT DP+C++RA LS GRY+ A SL R +G+ +EA Y EA+ V+PL+ A WF LGV M L
Sbjct: 497 AERMVRDRLKRGGETPRMWCALGDLTDDPKCYERALVLSRGRYSAANVSLGRYHSDKGELKEASERYREAVKVRPLVPAVWFRLGVVSMNL 587
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A6G0X1Y6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1Y6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.610e-16 Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 10 EQAHKAEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMR 291
+Q +AE + RERL TP M LGDLT+D ++++W++S R+ARAK + AR F +GK EEA H +EA+ V P+ T AWF LG MR
Sbjct: 630 DQPKRAEAVVRERLEVAPTPLMWCCLGDLTEDVSFYEKSWEVSEHRFARAKRTWARKMFEQGKIEEAIAHLKEAVEVAPMFTQAWFFLGSLAMR 723
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A7S1U0T7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0T7_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.490e-15 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 22 KAEKIARERL-----LEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
+AE++ R++L + TP ML +LGD+TQDP ++RAW++S GRYARA+ +L G+GK EA Y ALAVKPL WF LG MRL
Sbjct: 218 RAERLLRKQLEANGGMANATPRMLTSLGDVTQDPTFYERAWEVSRGRYARAQVNLGSYHLGKGKMAEARDAYLLALAVKPLQPDIWFRLGAITMRL 313
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Match: A0A261Y055_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y055_9FUNG) HSP 1 Score: 83.2 bits (204), Expect = 4.060e-15 Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 10 EQAHKAEKIARERL-LEKETPGMLAALGDLTQDPECWQRAWDLSGGRYARAKASLARMRFGEGKYEEACGHYEEALAVKPLLTAAWFSLGVARMRL 294
EQA KA+K+ ++L L ++P +L LGD+ QDPE WQ+AW +SG RYARA SL F ++ ++ YE AL + PL +WF LG A M++
Sbjct: 506 EQASKAKKVVNDQLALHPDSPKLLCILGDINQDPEQWQKAWQVSGQRYARAMRSLGGYYFKADEFAKSIECYEAALKINPLFENSWFVLGCAAMQV 601 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15898.4040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15898.4040.1 >prot_E-fasciculatus_F_contig15898.4040.1 ID=prot_E-fasciculatus_F_contig15898.4040.1|Name=mRNA_E-fasciculatus_F_contig15898.4040.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=195bp MSWEQAHKAEKIARERLLEKETPGMLAALGDLTQDPECWQRAWDLSGGRYback to top mRNA from alignment at E-fasciculatus_F_contig15898:519..2472+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15898.4040.1 ID=mRNA_E-fasciculatus_F_contig15898.4040.1|Name=mRNA_E-fasciculatus_F_contig15898.4040.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1954bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15898:519..2472+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15898:519..2472+ >mRNA_E-fasciculatus_F_contig15898.4040.1 ID=mRNA_E-fasciculatus_F_contig15898.4040.1|Name=mRNA_E-fasciculatus_F_contig15898.4040.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1170bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15898:519..2472+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |