mRNA_E-fasciculatus_F_contig15885.4035.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.260e-69 Identity = 108/127 (85.04%), Postives = 115/127 (90.55%), Query Frame = 2
Query: 2 GEDMAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETNTGLWALVAVKLDVADG 382
GEDMA GKLD DGVLLWSWQEG+TGED +SD AATDDGGVV GGY NGTLSGV SEGL DF AIKFDSDGTEEWRWQ+GTE+D+ ISTCSKTADGNVVLTG T+GDW ETNTGLWALVAVKLDV+DG
Sbjct: 52 GEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDG 178
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 219 bits (558), Expect = 2.830e-67 Identity = 105/124 (84.68%), Postives = 111/124 (89.52%), Query Frame = 2
Query: 11 MAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETNTGLWALVAVKLDVADG 382
MAAGKLD DG +LWSWQEG+T ED LSD AATDDGGVVF G+FNGTL+GVASEGL DF AIKFDSDGTEEWRWQDGTE D+ I+TCSKTADGNVVLTG T GDWVETNTGLWALVAVKLDV DG
Sbjct: 1 MAAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDG 124
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.050e-65 Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 2
Query: 2 GEDMAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETNTGLWALVAVKLDVADG 382
G DMAAGKLD DG +LW WQEGST +D L+D AATDDGGVVF G++NGTL+GV SEGL DFFAIKFDSDGTEEWRWQDGTE+D+ I TCSKTADGNVVLTG T+GDWVETNTGLWALVAVKLDV DG
Sbjct: 55 GTDMAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDG 181
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 101 bits (252), Expect = 1.560e-22 Identity = 61/126 (48.41%), Postives = 74/126 (58.73%), Query Frame = 2
Query: 8 DMAAGKLDGD-GVLLWSWQEGSTGEDVLSDVAATDDG-GVVFGGYFNGTLSGVASEGLTDFFAIKFD-SDGTEEWRWQDGTEQDDYISTCSKTADGN-VVLTGHTEGDWVETNTGLWALVAVKLDV 373
D A LD D G LLW WQ+GS G DV+ D+G VV GY +G SGV + G DF AIK + +DG+E WRWQDGT++ D I ++TADG VL G T+GDW N G V LDV
Sbjct: 104 DFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGESVVMAGYTSGNFSGV-NAGSNDFVAIKLNFTDGSEVWRWQDGTDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDV 228
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 100 bits (250), Expect = 3.010e-22 Identity = 60/125 (48.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query: 2 GEDMAAGKLDGDGVLLWSWQEGSTGEDVL-SDVAATDDGGVVFGGYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETNTGLWA-LVAVKLD 370
G D A K+DGDG LLW WQ+G+ G D+L + V+A ++G V+ G + SG S G DF AIK DS GT W WQDGT D I + T DG VVL G+T G+W TG AVKLD
Sbjct: 131 GYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSG-PSVGSLDFVAIKLDSGGTTLWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEWSGGLTGEECDFAAVKLD 254
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D7G371_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G371_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 3.910e-22 Identity = 52/114 (45.61%), Postives = 65/114 (57.02%), Query Frame = 2
Query: 2 GEDMAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFG---GYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETN 334
G D AA KLD G + W WQ + G + +S +A +D ++ G G FNGT S G TDF A+K D GTE WRWQDGT QDD + + + DG+ VL GHT G W N
Sbjct: 46 GTDFAACKLDSSGNVTWRWQATTDGLNAVSSIAPANDSFILGGRTTGNFNGT-----SAGGTDFVAVKLDDSGTEVWRWQDGTVQDDVVEAVAHSDDGSAVLAGHTYGSWSSDN 154
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 6.460e-22 Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = 2
Query: 2 GEDMAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETN 334
G D AA KLD G + W WQ + G D +S +A + G V GG G +G ++ G TDF A+K D GTE WRWQDGT +DD++ + DG+ VL GHT G W N
Sbjct: 172 GTDFAACKLDSSGNVTWRWQATTDGLDAVSSIAPAN-GSFVLGGRTTGDFNGTSAGG-TDFVAVKLDDSGTEVWRWQDGTAEDDFVEAVVHSDDGSAVLAGHTYGSWSSDN 280
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.930e-21 Identity = 54/127 (42.52%), Postives = 68/127 (53.54%), Query Frame = 2
Query: 2 GEDMAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVASEGLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETNTGLWALVAVKLDVADG 382
G D A KLD DG LWSWQ+G+ +D VA DG V GY G + +EG TDF K D++GT WRWQDGTE +++ DG V L G++ G + N G V VK+D DG
Sbjct: 340 GYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWN-QPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYSTGAFGGINKGSEGFVVVKIDGRDG 465
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: A0A0R2VD36_9SPHI (Fibronectin type-III domain-containing protein n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A0R2VD36_9SPHI) HSP 1 Score: 80.5 bits (197), Expect = 3.980e-15 Identity = 47/125 (37.60%), Postives = 73/125 (58.40%), Query Frame = 2
Query: 23 KLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVASE---GLTDFFAIKFDSDGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTE----GDWVETNTGLWALVAVKLDVA 376
K+D +G LLW G +G D+L DV ATDDGG + GGY + LSG +E G D++ +K ++ G +EW+ G +DY+ + + + DG +L G+++ GD VET G + +KLD +
Sbjct: 196 KIDSNGNLLWQNTIGGSGNDLLFDVEATDDGGFLLGGYSDSDLSGDKTEDGRGGYDYWVVKVNALGAQEWQRTLGGSSNDYLFSLAPSGDGGFLLGGYSDSELSGDKVETGPGGFDYWILKLDAS 320
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 5.210e-15 Identity = 51/126 (40.48%), Postives = 67/126 (53.17%), Query Frame = 2
Query: 11 MAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGG-VVFGGYFNGTLSGVASEGLTDFFAIKFDS-DGTEEWRWQDGTEQDDYISTCSKTADGNVVLTGHTEGDWVETNTGLWALVAVKLDVADG 382
+A GDG LWSWQ+G+ +DVL V G VV G G + + TDF A+K ++ DG+E WR+QDG+ DD + + + D VVL G+TEG N G VKLD ADG
Sbjct: 131 VAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLD-ADG 255 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15885.4035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15885.4035.1 >prot_E-fasciculatus_F_contig15885.4035.1 ID=prot_E-fasciculatus_F_contig15885.4035.1|Name=mRNA_E-fasciculatus_F_contig15885.4035.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp MAAGKLDGDGVLLWSWQEGSTGEDVLSDVAATDDGGVVFGGYFNGTLSGVback to top mRNA from alignment at E-fasciculatus_F_contig15885:29..1461- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15885.4035.1 ID=mRNA_E-fasciculatus_F_contig15885.4035.1|Name=mRNA_E-fasciculatus_F_contig15885.4035.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1433bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15885:29..1461- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15885:29..1461- >mRNA_E-fasciculatus_F_contig15885.4035.1 ID=mRNA_E-fasciculatus_F_contig15885.4035.1|Name=mRNA_E-fasciculatus_F_contig15885.4035.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=744bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15885:29..1461- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |