prot_E-fasciculatus_F_contig1587.4026.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1587.4026.1
Unique Nameprot_E-fasciculatus_F_contig1587.4026.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length103
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1587.4026.1 vs. uniprot
Match: D8LBY4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY4_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 2.090e-28
Identity = 71/116 (61.21%), Postives = 76/116 (65.52%), Query Frame = 0 
Query:    1 PIPNAWGALEGRAHLAQGSNRLAG-LPPTIFSIFVLL---LGVLS---RTDTKELGALTGLKGSHPSLKGGLLAGSIPNAWRALEGLAHLALGS------IPPELGNLAALTCLAL 103
            PIPNAWGAL+G AH A GSN+LAG +PP + S   L    LG  S   RT  KELGALT LK S PS    L    IPNAW AL+GLAHLALGS      IPPELGNLAAL CL L
Sbjct:    5 PIPNAWGALQGLAHRALGSNQLAGSIPPELGSFAALTHLELGENSQTMRTIPKELGALTELKESFPSYNQLLDTRPIPNAWGALQGLAHLALGSNQLAGSIPPELGNLAALACLDL 120
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1587.4026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBY4_ECTSI2.090e-2861.21Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..40
NoneNo IPR availableTMHMMTMhelixcoord: 22..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1587contigE-fasciculatus_F_contig1587:10238..14091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1587.4026.1mRNA_E-fasciculatus_F_contig1587.4026.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1587 10238..14091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1587.4026.1 ID=prot_E-fasciculatus_F_contig1587.4026.1|Name=mRNA_E-fasciculatus_F_contig1587.4026.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=103bp
PIPNAWGALEGRAHLAQGSNRLAGLPPTIFSIFVLLLGVLSRTDTKELGA
LTGLKGSHPSLKGGLLAGSIPNAWRALEGLAHLALGSIPPELGNLAALTC
LAL
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