mRNA_E-fasciculatus_F_contig105.401.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 1440 bits (3728), Expect = 0.000e+0 Identity = 832/1144 (72.73%), Postives = 932/1144 (81.47%), Query Frame = 2
Query: 170 MALTDRAALVALFRSTGGASWGRKDSWDTSAELATWSGVEVNDDGRVVRLSLGSNNLQGHIPPQLGHLDALEGLHLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTALWDHTRGVQDVGQGTACTVSGGNIPNELRRLLDTLDRAERAYLDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNPP-SLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLERIQDGVDDVKGKLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
MA TDR ALVALFRS GGA+W RK++WDT+A+L +W GV +N+ GRV L L NNLQG IP ++G L+ +E L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LTALWDHT+ Q V +G T+ GG +P++L RLLD LDRA L L N WAEPP SIV+KG SIRGYFEDLY E RVQR+SVKIILVGQEGAGKTSLR+SMK N A TGE EESTVFADVEPM+LEGS VRVYDCAGQV YTGLLQMFLTPRSVCVLVCNAEAFGQQRG + GQV++DC KLEELRVC WLRS+SRRVP+NDVILVATKCDL GN + GRR+E A RTWL+SW+ +G Q VRLE GVCLTSCC +AV E+ E + G++ GWACDWR++ DD PP L+HRLVNKP G GLRG QMVLPRSWD+ALT LEALE GRDPVE+V + L+ P R DAT+TA +T VYQGITVE L KWQE V LARRG VTNA NALEGALS+REFDGSLVRHE FVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGD +TLEDPLDIASW RLKN+GVLEPRLA MWP+GLS+YVLPTLASLGLTFPL+ D A GLVVLLRL PDRPERVGKVIDTFCL+QTPA SWK+FLGVP GAIEKVLT CC LGGVQ FWR GVLV+GGL D+ FAVVLEYS DNEL AQI+GDISTPAPWVALS+V SAVRLMLLDFPGLRSRGSL CP+HGDAMLL +K T+AG LLE SGC QCS DT G+GAAAI LV MVDIR DRDVI +V+ R +L QYS S A +SN VL +K++ +A TL+ DG+DD+KG+L +VL STQESLMRLKNLQA NY YPRLVAVE+IAS GT S A +L+ L V T+EM LHFLCPVDMTKV CGY GEGYRFRE R WVK +SPVLQVAVVTAKVAL+ATSGLDVDLS+FLKDV+DG VDELV +TLDED L V+ G+++ NM+ +TRASYEAL+ FM K L+RRK+ D DGYVDFRD M+R++DGRGG VWVRNENV++WL S S+A PSR
Sbjct: 1 MASTDRDALVALFRSAGGATWRRKENWDTAADLESWFGVILNNQGRVAELKLAVNNLQGVIPEKIGALNKIEILTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNELTALWDHTQNAQHVEEGGNRTL-GGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASER--GWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVARTLK---DGLDDLKGRLGKVLDSTQESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGK--LERRKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNAVPSR 1136
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 1409 bits (3647), Expect = 0.000e+0 Identity = 837/1247 (67.12%), Postives = 927/1247 (74.34%), Query Frame = 2
Query: 170 MALTDRAALVALFRSTGGASWGRKDSWDTSAEL--ATWSGVEVNDDGRVVRLSLGSNNLQGHIPPQLGHLDALEGLHLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ------------------------LTALWDHTRGVQD-VGQGTACTVSGGNIPNELRRLLDTLDRAERAYLDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNN-GDDNPPSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLER-----------IQDGVDDVKG-----------------------------------------------------------------KLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
MA TDR AL ALFRSTGG W RKD+WDT+A+L ATW GVEVN GRV++LSL NNLQG +P +LG L L+ L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LTALWDHT +QD V + A +SGG IP++L RLLD LDRAE L L N WAEPPESIV KG +SIRGYFEDLYAEPCRV+RSSVK+ILVGQEGAGKTSLR+SMK NEAT TG+ EESTVFADVEPMELEGSSVRVYDCAGQ YTGLLQMFLTPRSVCVLVCNAEAFGQQR ++ GQ+ +DC KLEELRVC WLRSI+RRVPDND ILVATKCDL GN ++GRR+E ACR WL+SW+RNG Q VRLEHGV LTSC P EH E NH +GGW CDWR + GDD+ P LLHRLVNKP GGGLRG Q+VLPRSWD+ALT LEALE GRDPVE+V KL GR DA + YQGITVEDL KW ETV ELARR TVT+A NALEGALS+REFDGSLVRHE FVFLDVVWLARILKPLLNHKDEE+FDGLVNLGDTGD +TLEDPLDI SW+RLKNEGV+EPRLA A+WPDGLSE+VLPTLASLGLTFPLE D A+GLVVLLR KPD PE VGKVIDTFC E PA ASWK+FLGVPPGAIEKVLT CC LGGV+ FWR V V+GG QG FAVVLEYS +NEL A+I+GDISTP PW+ALS+V SAV LM+ DFPGLRSRGSL CP+HGDAMLLA K R GD LE S C QCS DT G+GAAAI LVRMVDIR DRD I EV+ R DL G+YS SPA +S +L +KID +A+ + I+ G+ DVKG +L+ V +TQE LMRLKNLQAPNY YPRLVAVE++AS T S A + +LS L V +EM LHFLCPVDMTKV CGY GEGYRFRETRGWVK ISPVLQVAVVTAKVAL AT+GL+V++S+FLKDVKDGL DELV R+LDEDAL V+SG++++ A+MQ TRASYEALK+ MDKEQ+ R KN D DGY+DFRDKMKRV DGRGGMVWVRNENVQ+WL S S+ APSR
Sbjct: 1 MADTDRGALKALFRSTGGVRWKRKDNWDTAADLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALWDHTHYLQDIVHEEGAHGMSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTV--EGGWVCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHEMXXXXXXXXXXXXXXXEDTKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRLENVFKNTQEILMRLKNLQAPNYLYPRLVAVEEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEEDVDADMQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTAPSR 1245
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 1397 bits (3615), Expect = 0.000e+0 Identity = 726/994 (73.04%), Postives = 809/994 (81.39%), Query Frame = 2
Query: 629 TALWDHTRGVQDVGQGTAC-TVSGGNIPNELRRLLDTLDRAERAY-LDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGS-EARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNP-PSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLERIQDGVDDVKGKLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
TALW+HT V+D A ++ GG+ P +L RLLD LDRAER L+L N WAEPPESIV KG ++IRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMK EAT TGE EESTVFADVE MELEGSS+RVYDCAGQV YTGLLQMFLTPR+VCV+VCNAE+FGQQRG+ E GQV++DC KLEELRVC WLRSISRRVPDNDVILVATKCD GN G+IG+R+E A R WL+SW+R+G Q VRLE GVCLTSCC V E E + N +GGW CDWR+ DDNP PSLLHRLVNKP GGGLRGAQMV+PRSWD+ALT LEALE GRDPVEMV + L DAT TA KT +Y GIT EDL TKWQE LA R TVTNADNALEGAL++REFDGSLVRHE FVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGD +TLEDP DIASW RLKNEGVLEPRLA +WP+GLSEYV+PT+ASLGLTFPLE D A GLVVLLRL+ DRPE VGKVIDTFCL+QTPAL ASWK+FLGVP GAIEKVLT CC LGGVQ FWR GVLV+GG+ +Q G FAVVLEYS DNEL AQI+GDISTPAPWVALS+V SAV LMLLDFPGLRSRGSL CP+HGDAM LA+ TR GD +LE S CRQCS DT G+GAAAI LVRMVDIR DRDVI EV+AR DL GQYS S +SN GVL +K++ +A TL+ DG DD+KG+L +VL STQESLMRL+ LQAPNY YPRLVA+E+IAS GT + AR + +LS L V T+EMTLHFLCPVDMTKV CGYDG+GYRFRETR WVK +SPVLQVA+VTAKVA++ATSGLDVDLSDFLKDV DGLVDELV R LDED L V+SG++++ +MQ +TRASYEAL M K L+RRK+ D DGYVDFR+ M+R++DGRGG VWVRNENVQKWL S SSAAPSR
Sbjct: 250 TALWNHTLNVEDARHEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAM--EGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLK---DGFDDLKGRLSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGK--LERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPSR 1236
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 1364 bits (3530), Expect = 0.000e+0 Identity = 715/1039 (68.82%), Postives = 797/1039 (76.71%), Query Frame = 2
Query: 635 LWDHTRGVQDVGQGTACTVSGGNIPNELRRLLDTLDRAERAYLDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNP-PSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLE----RIQDGVDDVKGKLDRVLA-----------------------------------------------STQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPS 3589
LWDHT +DVGQ A +SGG IP+ELRRLL+TLD A+ DLG N WAEPPESIVTKGMESIRGYFEDLYAEPCRVQR SVK++LVGQEGAGKTSLR+SMK NEAT TGE EESTVFADV+PMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCN EAF Q+ GSEA GQVQ+DC KLEELRVCHWLRSISRRVP +DVILVATKCDLACGN GD+G+RL HACR WLS+W+RNG Q VRLEHGVCLTSCCPAAVSEH E++ GNH KGGW CDWR++ DD+ PSLLHRLVNK GGGLRGAQMVLPRSWDMALT LEALELGRDPVEMV Q L+ R + T TA TDVYQGI VEDL+ KWQ TV LA+ G VTNADNALEGALS+R I KPLLNHKDEET++G VNLGDTGDK ITLEDPLDIASWWR KNEGVLEPRLAY MWPDGLSEYVLPTLASLGLTFPLE D GLVVLLRLKPDRPERVGKVI TFCL+QTPA A+WK+FLGVPPGAIEKVLT CC LGGVQIFWR GVLV+GGL D+ G FA VLEYS +N L AQI+GD S A WVALS+V SAV LMLLDFPGLR RGSL CP+HGD +LL +K TRAGD L S C+QCS DT +GAAAI LVRMV++R DRDVI EV+ R +L GQY SP +S +L +KI+ + + + + G+ +VKG+++R +TQESLMRLKNLQAPNY YP LVAVE+ + GT SGAR +S+L + R ++MTLHFLCPVDMTKV CGY G+GYRFRETRGWVK ISPVLQVA+VTAKVAL+ATSGLDVDLSDFLKDVKDGLV ELV TLDEDAL ++SG++++ A+M+ TRASYEALK+FMDKEQ+DR KN D DGYVDFRDKMKRV DGRGGMVW+RNENVQ+W SRS+AA S
Sbjct: 516 LWDHTCNAEDVGQERAKRMSGGTIPSELRRLLETLDGADT---DLGGNPWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNVEAFEQRLGSEANGQVQEDCRKLEELRVCHWLRSISRRVPYSDVILVATKCDLACGNAGDMGKRLAHACRLWLSNWVRNGMQPVRLEHGVCLTSCCPAAVSEHGESSPGNHYA--KGGWGCDWRDHRDDSSSPSLLHRLVNKLDGGGLRGAQMVLPRSWDMALTVLEALELGRDPVEMVLQTLAGADRENLTDTAEANTDVYQGIAVEDLNAKWQATVDGLAKGGIAVTNADNALEGALSIR----------------------IPKPLLNHKDEETYEGFVNLGDTGDKQITLEDPLDIASWWRHKNEGVLEPRLAYCMWPDGLSEYVLPTLASLGLTFPLENDPTGGLVVLLRLKPDRPERVGKVIYTFCLDQTPAFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSRCQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTQESLMRLKNLQAPNYLYPGLVAVEETGADGTPSGARGMKSMLHKV-RGVGKDMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDVKDGLVGELVDPTLDEDALLRIVSGEEDVGADMRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDSRSNAALS 1526
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 1329 bits (3439), Expect = 0.000e+0 Identity = 816/1317 (61.96%), Postives = 921/1317 (69.93%), Query Frame = 2
Query: 170 MALTDRAALVALFRSTGGASWGRKDSWDTSAELATWSGVEVNDDGRVVRLSLGSNNLQGHIPPQLGHLDALEGLHLS------------------------------------------------------------------------------------------------WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTALWDHTRGVQDVG-QGTACTVSGGNIPNELRRLLDTLDRAERAYLD---------LGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNP-PSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATN-SNAGGVLAKKIDSMAVTLE--------------------------RIQDGVDD----------------------------------------VKGKLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
MA TDR AL+ALFR T G W R+ +W T AELATW GV+VN GRVV+L L +NNLQG IPP LG L AL+ L+L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ALWDHT+ VQDV + ++ GG +P++L RLLD D E L+ L N WAEPPESIV KG +SIRGYFEDLYAE CR++R VK++LVGQEGAGKTSLR+SMK N+ATLTGE E STV ADVE MELEGSSVRVYDCAGQV YTGLLQMFLTPRSVCVLVCNA FG+Q GS+ QV++DC KLE LRVC+WLRSISRRVPD +VILVATKCDLA GN +IGRR+E ACR WLSSW +VRLE GVCLTSC P EH E+++ N + K WACDWR+ G P PSL++RLVNKP GGLRG QMVLPRSWD+ALT L++LE GRDPVEMV K S R AT+TA KT VYQGITVE+LS KWQETV L RRG TVTNA+NALEGALS+REFDGSLV HE+FVFLDVVWLARILKPLLNHKD+E FDG VNLGDTGD ITL+D DIASW RLK EGVLEPRLAYA+WP+GLSEYVLPTLASLGL FPLE D A+GLVVLLRLKP RPE VGKVIDTFC TPA ASWK+FLGVPPGAIEKVLT CC LGGVQ FWRYGVLV+GGL Q ER TFAVV+EYS DNEL+AQI+GD+STP PW A S+V SAV LML+DFPGL +G L CP+HGD ML +KATR GD LE S C QCS DTGG+GAAAI L+R VDIR DRDVI EV+AR DL QYS P + S L +KID MA ++ ++ G+ + G+LD+VL STQESLMRL++LQAPNY YPRLV V+++ S GT+S AR ++S+LS LC V ++MTL FLCPVDMT+V CGY GEGYRF+ETR WVK ISPVLQVAVVTAKVAL AT+GL VD+SDFLKDVKDGLV+ELV RTLD++AL + GD NI A++Q TRASYEALK+FMDKEQ++R KN D DGY+DFRD+MKRV DGRGGMVWVRNENVQKWL SRS AAP+R
Sbjct: 1 MASTDREALIALFRLTCGYGWSRRGNWGTDAELATWDGVQVNGQGRVVKLGLAANNLQGPIPPALGKLAALQDLYLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALWDHTQNVQDVDHKERGHSMPGGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLS--KSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILK-SPDSDRGATETA--KTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKVEXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAAPTR 1312
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 1321 bits (3418), Expect = 0.000e+0 Identity = 812/1316 (61.70%), Postives = 906/1316 (68.84%), Query Frame = 2
Query: 170 MALTDRAALVALFRSTGGASWGRKDSWDTSAELATWSGVEVNDDGRVVRLSLGSNNLQGHIPPQLGHLDALEGL-------------------------------------------------------------------------------------------------------------------------------------------HLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLT-----------------------------ALWDHTRGVQDVG-QGTACTVSGGNIPNELRRLLDTLDRAERAYLDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQV-QDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNP-PSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQY-SCLSPATNSNAGGVLAKKIDSMAVTLERIQDGVDDVKGKLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARR-KESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
MA TDR AL+ALFRSTGGA W R+D WDT A LATW G EVND GRVV L L SNNLQG+IPP+ G L L+ L +W XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALWDHT+ VQD+ + ++SGG +P++L RLLD LD Y+ LG N W EPPES+V KG +SIRGYFEDLYAEPCR+ RSSVK++LVGQEGAGKTSLR+SMK N+A+ TG+ NEESTVFA+VEPMEL+GSSVRVYDCAGQV YTGLLQMFLTPRSVCVLVCNA FGQ+RGSE G+V Q+DC KLEELRVC WLRSISRRVPDNDVILVATKCDL GN G+IG R+E++CRTWLS W+RNG Q VRLE VCLTSC P V EH E +AGNHV KGGWACDWRN DD P PS LHRLVNKP G GLRGAQMVLPRSWD+AL LEALE GRDPVE+V +K P R D T+T GK DVYQGITVE+L TKWQETV EL RRG TVTN NALEGALS+REFDGSLVRHE+FVFLDVVWL+RILKPLLNHKD+ TFDG V LGDTGD ITL D DI SW RLK+EGVLEPRLA AMWP GLSEYVLPTL S+GLTFPLE D GLVVLLRL+P RPE VG+VIDTFC + TPA ASW++FLGVPPGAIEKVLT CC LG VQ FWRYGVLV+GGL D RG FAVV+EYS DNEL AQI+GDISTPAPWVALS+V SAV LML+DFPGLR +G L CP+HG+ M A+K RAGD LER C +CS +T G+GAAAI LV +VDIR DRDVI EV+AR L QY SC P +S L +KI+ MA+ ++ + G+LD VL STQESLMRLKNLQAPNY YPRLV V+K + G SS A K L S L + ++MTLHFLCPVDMT+V CG GEGYRFRE R WVK ISPVLQV +VTAKVAL A +GL+VD+S FLKDV+DGL+ E+V RTLDEDAL +SGD I ++Q TRASYEALK FM+ E+ RRKN D DGY+DFRDKMK + DGRGG VW+RNENVQKWL S SS APSR
Sbjct: 1 MASTDREALIALFRSTGGAGWKRRDKWDTDAVLATWDGAEVNDQGRVVGLHLSSNNLQGNIPPEPGDLRQLQRLCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTWLNXXXXXXXXXXXXXXXXXRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALWDHTQDVQDIDPKERGDSMSGGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVW--KGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETG-GKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLERK-CPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQYFSC--PTGSSKTEDELLRKIEDMAIAMKVMT-------GRLDTVLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSNSSPAPSR 1303
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0 Identity = 693/1044 (66.38%), Postives = 793/1044 (75.96%), Query Frame = 2
Query: 623 QLTALWDHTRGVQDVGQGTA-CTVSGGNIPNELRRLLDTLDRAERAYLDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNPP-SLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLERIQDGVDD--------------VKGKLDR------------------------------------VLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
Q++ALWDHT+ VQD Q C +SGG++P +L RLLD L ERA + L N WAEPPESIV KG +S+R YFEDLYAEPCR++R S K++LVGQEGAGK+SLR+SMK NE T TGE EESTVFADVEPMELEGSSVRVYDCAGQV YTGLLQMFLTPRSVCVLVCNA AFGQQ + G+V++DC KLEELRVC WLRSISRRVP NDVILV TKCDLA GN +IG R+EHACRTWLSSW+R+G Q V+LE GV TSC PA +H E NH KG WACDW + DD+PP SLLHRLVNKP GGGLRGAQMVLPRSWD L L++LE GRDPVE+V +K P R DAT+TA G T VYQGITVEDLS KWQ+ V EL RRG VTNA NALEGALS+REFDGSLVRHE FVFLDV+WLARILKPLLNHKD+ETFDG VNLGDTGD ITL+DPL IASW RLKNEGVLEPRLAYAMWP GLSEYVLPTLASLGLTFPLE D +G VVLLRLKP+RP+ VG+VIDTFC TPAL ASW +FLGVPPGAIEKVLT CC LG VQ FWRYGVLV+GGL D G RG FAVVLEYS D++L QI+GDI TPAPWVALS+V SAV LML+DFPGLR G+L CP+HGDAML+A+K T+AG+ L+R C +CS +T G+GAAAI L+RMVDIR DR I EV R L G YS A +S L + ++S+ T++ GVDD V+G++ R VL STQESLMRLKNLQAPNY YPRLV V+++ S GTSS A K+S+L+ L + ++MTLHFLCPVDMT+V CGY GEG+RF++TRGWV+ ISPVLQVAVVTAKVAL AT+GL+VD SDFLKDV+DGLV ELV RTLDE AL V++G++ I A+MQ TRASYEALK+FMDKE++ R K+ D DGYV FRD+MKRV DG+GGMVWVRN+NVQKWL SR AAP+R
Sbjct: 59 QISALWDHTQNVQDEDQDKGGCGMSGGSMPGQLCRLLDVL---ERAKIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENH--GSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLKRR-CPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDALKGHYSFDGQAGSSKKKDGLTRMVESIIKTMK---GGVDDXXXXXXXXXXXXXXVQGEVRRGFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLESTQESLMRLKNLQAPNYLYPRLVVVKEVGSGGTSSKAHGKKSMLTKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKDVRDGLVGELVDRTLDEHALRRVVTGEEAIGADMQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKWLESR--AAPTR 1091
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 1287 bits (3330), Expect = 0.000e+0 Identity = 677/1002 (67.56%), Postives = 764/1002 (76.25%), Query Frame = 2
Query: 623 QLTALWDHTRGVQDVGQGTACTVS-GGNIPNELRRLLDTLDRAERAYLDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRN-NGDDNPPSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQY-SCLSPATNSNAGGVLAKKIDSMAVTLERIQDGVDDVK-------GKLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
+ ALWDHT+ VQDV + GG +P++L RLL LDR L L N WAEPPESIV KG +SIRGYFEDLYAEPC ++RSSVK++LVGQEGAGKTSLR+SMK N+AT TGE EESTVFADVEPMELEGSSVRVYDCAGQV YTGLLQMFLTPRSVCVLVCNA FGQQ GS+ QV++DC KL+ LRVC WLRSISRRVP NDVILVATKCDL GN + GRRLEHACR WLS+W+RNG VRLE V LTSC P EH E+ G+ K GWACDWR+ GD + PSLL+RLVNKP GGLRG QMVLPRSWD+ALT LEALE GRDPVEMV K S R T+T GKT+VYQ I VE+L T W+ETV EL +RG VTNA+NALEGALS+REFDGSLVRHE+FVFLDVVWLARILKPLLNHKD+ TFDG VNLGDTGD ITL+D DIASW RLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLE D GLVVLLRL+P+RP VG+ IDTFC + TPA ASW++FLGVPPGAIEKVLT CC LG VQ FWRYGVLV+GGL D RG FAVV EYS +NEL AQI+GDIST APWVALS+V SAV LML+DFPGLR GSL CP+HG M A K AGD LER C +CS T G+GAAAI L+RMVDIR DR VI EV+AR L QY +C PA +S +K+D + G+LD+VL STQESL RLKNLQAPNY YPRLV V+++ S+GTSS A K+S+LS L + ++M LHFLCPVDMT V CGY GEGY+F+ETR WVK +SP LQV VVTAKVAL A +GL+VD+SDFLKDVKDGLV+ELV RTLDEDAL +SGD + A++Q TRASYEALK FM+ E+ RRKN D DGY++FR++MKR+ DGRGG VWVRNENV+KWL S SS APSR
Sbjct: 37 RFAALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDAS--KQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLK-SPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLERR-CPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQYFTC--PAGSSTDEDEFVRKMDEVKAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPSR 1032
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 1224 bits (3166), Expect = 0.000e+0 Identity = 649/967 (67.11%), Postives = 722/967 (74.66%), Query Frame = 2
Query: 941 MKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQV----------------------------GYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRN-------------------GKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNPP-SLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQGERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLE----RIQDGVDDVKGKLD-----------------------------RVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQVAVVTAKVALRATSGLDVDLSDFLKDVKDGLVDELVGRTLDEDALFHVLSGDKNISANMQTKTRASYEALKRFMDKEQLDRRKN--DVDGYVDFRDKMKRVTDGRGGMVWVRNENVQKWLHSRSSAAPSR 3592
MK N+ATLTG+ EESTV ADVEPMEL+GSSVRVYDCAGQV YTGLLQMFLTPRSVCVLVCNA FGQ+R SE G V+ DC KLEELRVC WLRSISRR+PDNDVILVATKCDLA GN +IG R+E ACRTWLS W+RN G Q VRLE VCLTS P V EH + +AGNH KGGWACDWR+ DD PP S LHRLVNKP G GLRG Q VLPRSWD+ALT LEALE GRDPVE V K P DA +TA GKTDVYQGITVE+L TKWQETV EL RRG TVTNA NALEGALSVREFDGSLVR E FVFLDVVWLARILKPLLNHKD+ETFDG VNLGDTGD ITL+DP DI SW RLK EGVLEP+LAYAMWPDGLSEYVLPTLASLGLTFPLE D +GLVVLLRLKP+RPE VGKVIDTFC TPA ASWK+FLGVPPGA+EKVLT CC LGGV+ FWRYGVLV+G L Q R TFAVVLEYS DNEL A+I+GDISTPA WVALS+V SAVRLML+DFPGLR +GSL CP+HGDAML D A R GD LLE S C QCS DTGG+GAAAI LVR VDIR DRDVI +V+AR DL QYS P S G L +KID +A ++ ++ GV ++KG++ +VL ST+ESLMR++NLQAPNY YPRLV V+++ + GT+S A K+S+LS L R+ ++MTLHFLCPVDMTKV CGY GEGYRF+ETRGWVK ISPVLQVAVVTAKVAL AT+GLDVD+S+FLKDVKDGLV+ELV RT+DE+AL +SGD +I A +Q TRASYEALK+FMDKEQ+DR KN D DGY+DFRD+MKRVTDGRGGMVWVRN+NVQKWL S S AAP+R
Sbjct: 1 MKANKATLTGDWKEESTVVADVEPMELQGSSVRVYDCAGQVMPSAIADNPPSGVYGQWGIVSSIDLGEVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRDSEHCGGVEGDCRKLEELRVCDWLRSISRRIPDNDVILVATKCDLAGGNAREIGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDEHGDRSAGNH--GSKGGWACDWRDEEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 965
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 1136 bits (2939), Expect = 0.000e+0 Identity = 627/1079 (58.11%), Postives = 719/1079 (66.64%), Query Frame = 2
Query: 173 ALTDRAALVALFRSTGGASWGRKDSWDTSAE-LATWSGVEVNDDGRVVRLSLGS----------NNLQGHIPPQLGHLDALEGLHLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTALWDHTRGVQDVG--QGTACTVSGGNIPNELRRLLDTLDRAERAY---LDLGSNSWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKENEATLTGERNEESTVFADVEPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNAEAFGQQRGSEARGQVQDDCNKLEELRVCHWLRSISRRVPDNDVILVATKCDLACGNTGDIGRRLEHACRTWLSSWLRNGKQAVRLEHGVCLTSCCPAAVSEHRENTAGNHVXXXKGGWACDWRNNGDDNP-PSLLHRLVNKPAGGGLRGAQMVLPRSWDMALTALEALELGRDPVEMVEQKLSRPGRRDATQTAWGKTDVYQGITVEDLSTKWQETVHELARRGFTVTNADNALEGALSVREFDGSLVRHERFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDKHITLEDPLDIASWWRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEKDAAQGLVVLLRLKPDRPERVGKVIDTFCLEQTPALCASWKVFLGVPPGAIEKVLTHCCRLGGVQIFWRYGVLVYGGLTDQ--GERGTFAVVLEYSLDDNELVAQIYGDISTPAPWVALSHVASAVRLMLLDFPGLRSRGSLNCPEHGDAMLLADKATRAGDNLLERSGCRQCSHDTGGVGAAAIHLVRMVDIRQDRDVIAIEVRARLADLVGQYSCLSPATNSNAGGVLAKKIDSMAVTLER---------------IQDGVDD--------------------------------VKGKLDRVLASTQESLMRLKNLQAPNYEYPRLVAVEKIASYGTSSGARRKESLLSALCRVCTREMTLHFLCPVDMTKVRCGYDGEGYRFRETRGWVKTISPVLQV 3211
A TDR L+ FRSTGG W ++ W +A+ L +W GV N DGRVV++ L NN+ G IP +LG L ALE L L+ +L+ALWDHT+ +D+G +GT +SGG +P++L RLLD LD ++ L LG+N W EPPE IV KG +++RGYFEDLYAEPCR++RS VK++LVGQEGAGKTSLR+SMK NEAT TGE EESTVFADVE MELEGSSVRVYDCAGQV YTGLLQMFLTPR+VCVLVCNA FGQQ SE+ QV +DC KLEELRVC WLRSISRRVP+NDVILVATKCDLA GN G IG R+EHACR WLSSW+RNG Q VRLE V LTSC V EH E++ G+H KGGWACDWR+ D NP PSLLHRLVNKP G GLRG QMVLPRSWD+ALT LEALE GRDPVE+V +K P R DAT+TA G+T +YQGITVEDLS KWQETV L R G TVTNA NALEGAL +REFDGSL+R+E+F+FLDVVWLA+ILKPLLNHKD+ETFDGLV+LGDTGD ITL+DP DIASW RLK++GVLEPRLAYA+WP+GLSEYVLP LA LGLTFPLE D A+GLVVLLRLKPDRPE VG IDTFCL+ TPAL ASWK+FLGVPPGAIEKVLT CC LGGV+ FWRYGVLV+GGL + G RG FAVVLEYS DNEL AQI+GDISTPAPWV LS+V SAV LMLLDFPGLR RGSL CP+HGD MLLA+KA+ G+GAAAI LVRMVDIR+DR + NS L +KID +A+ ++ + VD+ VK LD+V ST ESLMRL+NL PNY YPRLV V+++ S GTSS A + L + V ++MTLHFLCPVDMT V CGY GEGYR +ETRGWVK ISPVLQV
Sbjct: 14 AETDREVLLHFFRSTGGNCWTHQEGWAENADDLGSWYGVTTNADGRVVKMELHGERDYVSLYTGNNVIGAIPRELGRLGALEKLDLA------------------------------------------------------------------------HNKLSALWDHTQNAEDIGHDEGTQ-RMSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHEL--KGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLLANKAS-----------------PVAGLGAAAIDLVRMVDIRRDRRRVQ--------------------GNSKDENKLIQKIDDVAIAMKGGFNEVKXXXXXXXXDAKAAVDELKRXXXXXXXXXXXXXXXXXXXXXXXXNELVVVKRTLDKVAESTHESLMRLENLLDPNYRYPRLVVVKEVGSNGTSSNAHGVKRWLGKIRGVGKKDMTLHFLCPVDMTTVPCGYGGEGYRIQETRGWVKKISPVLQV 980 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig105.401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig105.401.1 >prot_E-fasciculatus_F_contig105.401.1 ID=prot_E-fasciculatus_F_contig105.401.1|Name=mRNA_E-fasciculatus_F_contig105.401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1142bp MALTDRAALVALFRSTGGASWGRKDSWDTSAELATWSGVEVNDDGRVVRLback to top mRNA from alignment at E-fasciculatus_F_contig105:17603..34753+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig105.401.1 ID=mRNA_E-fasciculatus_F_contig105.401.1|Name=mRNA_E-fasciculatus_F_contig105.401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=17151bp|location=Sequence derived from alignment at E-fasciculatus_F_contig105:17603..34753+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig105:17603..34753+ >mRNA_E-fasciculatus_F_contig105.401.1 ID=mRNA_E-fasciculatus_F_contig105.401.1|Name=mRNA_E-fasciculatus_F_contig105.401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6852bp|location=Sequence derived from alignment at E-fasciculatus_F_contig105:17603..34753+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |