mRNA_E-fasciculatus_F_contig15823.4002.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: D7FI59_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI59_ECTSI) HSP 1 Score: 327 bits (838), Expect = 1.270e-107 Identity = 165/178 (92.70%), Postives = 170/178 (95.51%), Query Frame = 1
Query: 1 RPGRAVSSVSMVTNMKKTKGKGKKGDDLPNVKVSAKDRRMGSKTEADKMDSESFPILEDLEEAEDTNIKVTPNAWKWPALWPYTPDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLNSK 534
RPGRAVSSVSMV NM KTKGKG KGD+LPNVKVSAKDRRMGSKTEADKMDSESFPILEDLEEAEDTNIKVTPNAWKWPALWPYTPDYFDRPDESEDEK FA+ARMQ CLEG KEALVEHYARFLTEGAEVLEIGASV SYLPEDLSFSKVVGVGMN+EEMK+NPRLTD+LVQNLNSK
Sbjct: 53 RPGRAVSSVSMVANMNKTKGKGNKGDELPNVKVSAKDRRMGSKTEADKMDSESFPILEDLEEAEDTNIKVTPNAWKWPALWPYTPDYFDRPDESEDEKTFATARMQPCLEGAPKEALVEHYARFLTEGAEVLEIGASVASYLPEDLSFSKVVGVGMNDEEMKSNPRLTDTLVQNLNSK 230
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: K8ZC85_NANGC (Methyltransf_11 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZC85_NANGC) HSP 1 Score: 117 bits (293), Expect = 2.210e-27 Identity = 61/123 (49.59%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 163 PILEDLEEAEDTNIKVTPNAWKWPALWPYTPDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLNS 531
P E+ +D IKV+P+AWKWP WPY DYF R E + + + + A AL EHY RFL +LEIGAS SYLP LS S+ VGVG+NEEEM ANP LTD +VQ+LN+
Sbjct: 80 PFTTKEEQEKDKGIKVSPSAWKWPKSWPYNDDYFSRRQE-DSVPLNGTPNLSPIYDNKAANALAEHYLRFLPPSGSLLEIGASAHSYLPPSLSPSRFVGVGVNEEEMAANPALTDRIVQDLNA 201
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: A0A835Z0R9_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R9_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.220e-25 Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 142 KMDSESFPILEDLEEAEDTNIKVTPNAWKWPALWPYTPDYFDRPDESEDEK----AFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLV-QNLNSK 534
K DS+ FP+LE + DT +KVTPNAWKWP WPY DYF R D A A+ + A++AL H++RF++ GAEVLEIGA SYLP L S+ VGVG++++EM AN L ++ V Q++N++
Sbjct: 55 KTDSKDFPVLE--VDPLDTGLKVTPNAWKWPVSWPYAGDYFSRESSEADADFYRVAAAALANAKAFDEDAEKALQGHFSRFISPGAEVLEIGAGAHSYLPSGLPRSRHVGVGLSKQEMDANNALLEAPVEQDVNAR 188
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: A0A7S2V1Y5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y5_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.070e-24 Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 193 DTNIKVTPNAWKWPALWPYTPDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLNSKV 537
D +KV PN+W WP WPYT + F+R + D + ARM+ + A E LV H+AR+ +G VLEIGAS SYLP ++S++ VVG+GM EEM N LT+ + Q+LN V
Sbjct: 85 DPTLKVLPNSWAWPPNWPYTDEQFERLNNDADGDFYKVARMEEIFDQEAGELLVGHHARYHKDGDRVLEIGASFKSYLPTNISYASVVGLGMQMEEMNKNEMLTERVAQDLNQDV 199
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: A0A0G4EB06_VITBC (Methyltransf_11 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EB06_VITBC) HSP 1 Score: 105 bits (262), Expect = 3.950e-23 Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 202 IKVTPNAWKWPALWPYTPDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGA-EVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLNSKVG 540
+KV P WKWP WP+ D F R D + D + F++A ++ + A+ AL HYAR GA VL+IGA SYLP D +++VVG+G+N++E+ ANP LT+S V +LNS+ G
Sbjct: 81 LKVEPYMWKWPPAWPFRKDQFKRTDNTSDIEFFSTADIRPFFDEPARIALTNHYARCFPSGAISVLDIGAGSYSYLPGDRQYARVVGIGINQDELDANPALTESFVVDLNSEEG 194
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: A0A7S1BJ03_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ03_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.520e-19 Identity = 60/171 (35.09%), Postives = 86/171 (50.29%), Query Frame = 1
Query: 112 RRMGSKTEADKMDSESFPILEDLEEAEDTNIKVTPNAWKWPALWPYTPDYFDRPDES----------------------EDEKA-------FASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLNSKV 537
R+M + E KM S + E E ++V P AWKWP+ WPY P F RP+E EDEK +A + + L + + L HYA +L++G +VLE+GA+ +SYLPE L+F + VG+G + M N RLT+S+V +LN V
Sbjct: 58 RKMREENEKKKMPMASA----EESEGESVGLRVGPQAWKWPSGWPYDPALFLRPEEEREVKTNVNPVDLVQGKGIEVVEEDEKPPMDHMTYWAENKEETVLTPASTDRLAAHYAFYLSDGMDVLELGAAENSYLPEGLTFGRHVGIGADAAAMAKNERLTESMVVDLNKVV 224
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: A0A7S2CSI9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CSI9_9EUKA) HSP 1 Score: 82.4 bits (202), Expect = 1.970e-16 Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 1
Query: 226 KWPALWPYTPD-YFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLN 528
KWP WP+ +F R DES D ++ R ++ GA ++ ++YA + +G +VL++ +S S+LPEDL +V G+GMN+EE+ N RLT+ +VQ+LN
Sbjct: 53 KWPTEWPFADKRFFTRSDESPDIMFYSEPRFVTHIDDGAITSIRDYYASVMKDGDDVLDLCSSWISHLPEDLKLGRVAGLGMNQEELSRNDRLTEFVVQDLN 154
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: A0A2E3NM33_9DELT (Methyltransferase type 11 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E3NM33_9DELT) HSP 1 Score: 80.5 bits (197), Expect = 1.830e-15 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 244 PYTPDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLN 528
P PD +R DES D +A ARM ++ AL ++YA LT GA+VL++ +S S+LPE + +V G+GMN EE+ ANPRL++S+V +LN
Sbjct: 3 PLPPDATNRVDESPDAHFYAMARMVVHIDEATIAALTDYYAEILTPGADVLDLMSSWVSHLPEAPTLGRVAGLGMNAEELAANPRLSESVVHDLN 97
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: I2GT14_9BACT (Methyltransf_11 domain-containing protein n=2 Tax=Fibrisoma limi TaxID=663275 RepID=I2GT14_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 3.840e-15 Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 244 PYTPDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLN 528
P+ YF R DES+DE+ + S R+ ++ A A + Y +L +VL++ +S S+LP D+ + +VVG+GMNE EM+ NP+LTD +VQNLN
Sbjct: 19 PFPEQYFRRMDESDDERFYDSPRLVVHIDDVAIAATTQLYREYLPPNGDVLDLMSSWRSHLPTDVPYRRVVGLGMNEVEMRDNPQLTDYVVQNLN 113
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Match: UPI001985BAB1 (Methyltransferase domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI001985BAB1) HSP 1 Score: 79.3 bits (194), Expect = 5.520e-15 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 253 PDYFDRPDESEDEKAFASARMQACLEGGAKEALVEHYARFLTEGAEVLEIGASVDSYLPEDLSFSKVVGVGMNEEEMKANPRLTDSLVQNLN 528
PDYF + DE+ D + R+ ++ GA A + Y +L AEVL++ +S S+LP D+ + +V G+GMNE E++ NPRLTD VQNLN
Sbjct: 4 PDYFKKADETNDNLFYVQPRLVVHIDEGAIAATTDLYREYLPAYAEVLDLMSSWRSHLPPDVHYERVAGLGMNEVELRENPRLTDFTVQNLN 95 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15823.4002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15823.4002.1 >prot_E-fasciculatus_F_contig15823.4002.1 ID=prot_E-fasciculatus_F_contig15823.4002.1|Name=mRNA_E-fasciculatus_F_contig15823.4002.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=172bp MVTNMKKTKGKGKKGDDLPNVKVSAKDRRMGSKTEADKMDSESFPILEDLback to top mRNA from alignment at E-fasciculatus_F_contig15823:443..2421+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15823.4002.1 ID=mRNA_E-fasciculatus_F_contig15823.4002.1|Name=mRNA_E-fasciculatus_F_contig15823.4002.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1979bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15823:443..2421+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15823:443..2421+ >mRNA_E-fasciculatus_F_contig15823.4002.1 ID=mRNA_E-fasciculatus_F_contig15823.4002.1|Name=mRNA_E-fasciculatus_F_contig15823.4002.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1032bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15823:443..2421+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |