mRNA_E-fasciculatus_F_contig1582.4000.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1582.4000.1
Unique NamemRNA_E-fasciculatus_F_contig1582.4000.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: D7FPU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU0_ECTSI)

HSP 1 Score: 503 bits (1295), Expect = 1.050e-171
Identity = 265/290 (91.38%), Postives = 269/290 (92.76%), Query Frame = 1
Query:  961 FDGVTLDLAQS*-NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGEFRGEAVAVAEGEEGGAEGGDSKGEPMEGERSGALEVVDDG--SPGAASKSTTR 1821
            FDGVTLDLAQS  NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQA+VGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLD NLD NFAGHPRGEGGIRREALDWEREADTDGLLASLERSG A PGEAEGE GAGV RRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVP+FLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKG FRGEAVAV E + GG EGGD KG+PMEGE  GALEVVD G  SPGA SKST R
Sbjct:   10 FDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGTA-PGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGVFRGEAVAVVESD-GGMEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 297          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A6H5KZX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX5_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 3.410e-150
Identity = 243/291 (83.51%), Postives = 247/291 (84.88%), Query Frame = 1
Query:  958 EFDGVTLDLAQS*-NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGEFRGEAVAVAEGEEGGAEGGDSKGEPMEGERSGALEVVDDG--SPGAASKSTTR 1821
            EFDGVTLDLAQS  NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCG+                   DELLSLLD NLD NFAGHPRGEGGIRREALDWEREADTDGLLAS+ERSG   PGEAEGE GAGV RRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVP FLRACEAEGFSLQTVYRAAPSA A VELYEFSKG FRGEAVAV E + GG EGGD KG+PMEGE  GALEVVD G  SPGA SKST R
Sbjct:   33 EFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGMF------------------DELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASMERSGTV-PGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPDFLRACEAEGFSLQTVYRAAPSASAQVELYEFSKGVFRGEAVAVVESD-GGMEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 303          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A836CJX9_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.260e-41
Identity = 101/222 (45.50%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 1024 SGACWAGTVVWPAALDLCDYMSEHLRQALVG-ATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDGNLDSNF----------AGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEF 1656
            +GACWAGT+VW AALDL DY+S H    L G ATVVELGCGIGVPGMVA LLGA+ VLTEQ ELL LL  NL +NF          +   R    I    LDW  + D   LL              EG             DF+L ADC++EPLYG+SWKAL   +  L    T  L  VERR  DG+  FL A    G  + T+  A+ ++  P+ELYE 
Sbjct:   30 AGACWAGTIVWQAALDLSDYLSRHHAGQLAGGATVVELGCGIGVPGMVAHLLGASAVLTEQAELLGLLRRNLAANFGVAHASASQVSSRRRTAPFISAAQLDWATD-DPRALLRD----------HFEG----------AHPDFILSADCIYEPLYGESWKALVTALRGLCGPHTRALVCVERRTADGINGFLDAARGAGLEV-TLPHASGASGVPIELYEM 229          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A2R5G0X5_9STRA (Protein N-lysine methyltransferase METTL21A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0X5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.210e-34
Identity = 94/235 (40.00%), Postives = 125/235 (53.19%), Query Frame = 1
Query:  964 DGVTLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDGNLDSNFAGH-PRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLS--DAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEF 1656
            DG  L+L  +   E + PIFSGACWAGTVVWPAAL LC+++ + +   +    V+ELG G+GVPGMV +LLGA  V+LTEQD L  LL  N+D+NFA   PR       + LDWE   ++         + A  P                  D +L +DCV++ LYGDSW+ALA  +  LS     T  L ++ERR  DGV +FL  C   G   + +          +ELYE 
Sbjct:   98 DGKMLELELTFPEESIQPIFSGACWAGTVVWPAALLLCEHL-KTMADTVKDQRVLELGSGLGVPGMVCQLLGAKEVILTEQDPLPELLRRNVDANFANDAPR----PLVDTLDWEEPEESS--------TNAQEP-----------------FDLILISDCVYQELYGDSWRALADCIKALSRPKRATLTLNALERRKADGVDEFLAYCREIGVCHKRIQTLMGPENEQLELYEM 302          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A024FZ75_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ75_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.230e-34
Identity = 96/246 (39.02%), Postives = 128/246 (52.03%), Query Frame = 1
Query:  961 FDGVTLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEH----LRQALVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDGNLDSNFAG---HP---RGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGT--TVLCSVERRGVDGVPQFLRACEAE-GFSLQTVYRAAPSAPAPVELYEF 1656
            F    L L+     EE+AP+FSGA WAGTVVW AA+ L  Y   H    LR AL    V+ELG GIGVPGM AR+ GA +V+LTEQ++L+ L+  N+ SN      HP   + E  I    L W +E+    L    +                       ++DFVL  DC+FEPLYGDSWKALA  M  + +     +V  SVERR  DGV +FL   +A      + + ++  SA   +E+Y+ 
Sbjct:   28 FGTTKLTLSLLLKEEELAPLFSGAAWAGTVVWDAAIYLTRYFLHHYGTELRNALRSTRVLELGAGIGVPGMAARIAGADSVILTEQEDLVDLIHRNIKSNANALGLHPANDKKEQAIVGRVLSWGKESINTYLKTYHDE----------------------QIDFVLSCDCIFEPLYGDSWKALAITMQEICELNPECSVFLSVERRKEDGVDRFLEHVDASTSLVSKLLEKSIGSAENLLEIYQL 251          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: F0X125_9STRA (Uncharacterized protein AlNc14C546G12115 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X125_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.620e-32
Identity = 89/233 (38.20%), Postives = 121/233 (51.93%), Query Frame = 1
Query: 1003 EEMAPIFSGACWAGTVVWPAALDLCDYMSEH----LRQALVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDGNLDSNF------AGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTT--VLCSVERRGVDGVPQFLRACEAEGFSLQTVY-RAAPSAPAPVELYEFS 1659
            EE+AP+FSGA WAGTVVW AA+ L  Y   H    LR  L    V+ELG GIGVPGM AR+ GA +V+LTEQ++L+ L+  NL  N       A + + E  I    L W +E+  + L+   +                       ++DFVL  DC+F PLYGDSWKALA  M  + +      V  SVERR  DGV  FL    +    +  +  ++  SA   +E+Y+ +
Sbjct:   51 EELAPLFSGAAWAGTVVWDAAIYLARYFLHHYGAILRDKLRSIRVLELGAGIGVPGMAARIAGAESVILTEQEDLVDLMHRNLKGNANALGLDAANDKKEQAIVGRVLSWGKESIHNYLMTYQDE----------------------QIDFVLSCDCIFVPLYGDSWKALAITMQAICETNPQCCVFLSVERRKEDGVDSFLEYIASRTILISKLLEKSIASAENLLEIYQLN 261          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A7S2RY16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY16_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.210e-32
Identity = 81/190 (42.63%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 1015 PIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRR---EALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLS-DAGTTVLCSVERRGVDGVPQFL 1569
            PIF G CWAGT+VW AA  + +++    R+ + GA+V+ELGCG+G PGMVA LLGA  V+LTEQ  LL LL  N+  NF     GEG +     + L W      D L+ S                     RR    D +L  DCVFEPLYG+SW  L + +  L+ D  TT++  +ERR  DGVP+FL
Sbjct:    2 PIFGGCCWAGTIVWAAAQAVMEHVLFPERERVQGASVIELGCGLGAPGMVAALLGARDVLLTEQSSLLPLLHRNIARNFPA--AGEGAVAAPGAQELAWGNSQVRD-LIDS---------------------RRGETFDLILVCDCVFEPLYGESWVLLCETLRHLAVDESTTLVVGLERRSEDGVPKFL 167          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A8J2SF35_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SF35_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.540e-31
Identity = 94/238 (39.50%), Postives = 124/238 (52.10%), Query Frame = 1
Query:  970 VTLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCD--YMSEHLRQALVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERR----GVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSK 1662
            + LDL  S   +++ P+FSGA WAGTV+W AA  L D  ++     Q + G T +ELGCG+GVPGM    LGA  V LTEQ  L+ LL  N+ +NF+    GE  +R  +  W R A  + L       G                      D ++C DCV+ PLYGDSWKAL + +  L+   T VL S+ERR    G DGV  FL    A GF+ +T Y AA     PVE++ F +
Sbjct:   50 LNLDLKLS--PDDLEPVFSGAAWAGTVLWRAAAVLVDRAFLGADAVQ-IKGRTCIELGCGLGVPGMACARLGARNVALTEQQSLVDLLTRNVAANFSA---GED-VRAVSFPWSR-AGAEALKHDFCDGGC--------------------FDVIVCCDCVYMPLYGDSWKALLEAIDALAGPATDVLISLERRHVKDGDDGVDPFLEGMRANGFA-RTSYPAAM----PVEVFRFRR 254          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A1V9YH22_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH22_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.840e-31
Identity = 95/240 (39.58%), Postives = 121/240 (50.42%), Query Frame = 1
Query:  973 TLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTT--VLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPA-------PVELYEFSK 1662
            +LD++   + EE+AP+F GA WAGT+VW AA  L +YM   L  + +   V+ELG G+GVPGMVA LLGA  VVLTEQ EL+ LL  N+  NFAG       +    L W REA                         A V    T  D +L  DCV+EPLYG+SW+ALA  M  L  A      L SVERR  DG+ +FL           ++ RA P A          +E+Y  S+
Sbjct:   28 SLDISLLLDEEELAPLFCGAAWAGTLVWEAAELLSNYMLNELDVSSL--RVLELGAGLGVPGMVAGLLGAQHVVLTEQPELVPLLRTNIRRNFAG----ANSVAAAELSWGREATR-----------------------AFVATHGT-FDVLLSCDCVYEPLYGESWRALAHTMDELCAANPACRALVSVERRHGDGIDRFLAFLPTATRLTASLLRAVPKATRGLCDEGDAIEIYVISR 237          
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A7S3JW58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW58_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.560e-31
Identity = 95/239 (39.75%), Postives = 126/239 (52.72%), Query Frame = 1
Query:  976 LDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCD--YMSEHLR--QALVGATVVELGCGIGVPGMVARLLGATVV-LTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWERE---ADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERR----GVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEF 1656
            L+L+     + + PIFSG  WAGTV+W AA+ L D  ++S++ +    L  A+V+ELGCG+GVPGMVA +LGA +V LTEQ  L+SLLD N+ +NF         I    LDW  E   A  + LL              +GE            D VL  DCV+ PLYGDSW+AL   +  ++   + VL +VERR    G DGV  FL A  +  F    +     S P PVE+Y F
Sbjct:   77 LELSLRMTPDAIEPIFSGGAWAGTVLWRAAIRLVDICFLSDNKKGIDELQSASVIELGCGLGVPGMVAAVLGARLVALTEQSNLVSLLDRNIKANFLSDSTNNPRIVARELDWCAEQAIALRNELL--------------DGEP----------FDIVLSCDCVYIPLYGDSWRALVDAIIAVAGPKSLVLVAVERRYVQGGTDGVDLFLNAMTSANFIPSLI-----SEP-PVEIYSF 285          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPU0_ECTSI1.050e-17191.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZX5_9PHAE3.410e-15083.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJX9_9STRA5.260e-4145.50Putative methyltransferase-domain-containing prote... [more]
A0A2R5G0X5_9STRA2.210e-3440.00Protein N-lysine methyltransferase METTL21A n=1 Ta... [more]
A0A024FZ75_9STRA2.230e-3439.02Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0X125_9STRA1.620e-3238.20Uncharacterized protein AlNc14C546G12115 n=1 Tax=A... [more]
A0A7S2RY16_9STRA4.210e-3242.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SF35_9STRA1.540e-3139.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V9YH22_9STRA1.840e-3139.58Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S3JW58_9STRA3.560e-3139.75Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1582contigE-fasciculatus_F_contig1582:12079..15807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue9e-134
Seed eggNOG ortholog2880.D7FPU0
EggNOG free text desc.lysine N-methyltransferase activity
EggNOG OGsKOG2793@1,KOG2793@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-18_001690.1
Exons4
Model size2216
Cds size816
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1582.4000.1prot_E-fasciculatus_F_contig1582.4000.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1582 12471..14799 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928051.446511-UTR-E-fasciculatus_F_contig1582:12078..124701622928051.446511-UTR-E-fasciculatus_F_contig1582:12078..12470Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1582 12079..12470 -
1695995803.7772603-UTR-E-fasciculatus_F_contig1582:12078..124701695995803.7772603-UTR-E-fasciculatus_F_contig1582:12078..12470Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1582 12079..12470 -
1622928051.5656073-UTR-E-fasciculatus_F_contig1582:14799..158071622928051.5656073-UTR-E-fasciculatus_F_contig1582:14799..15807Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1582 14800..15807 -
1695995803.827556-UTR-E-fasciculatus_F_contig1582:14799..158071695995803.827556-UTR-E-fasciculatus_F_contig1582:14799..15807Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1582 14800..15807 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928051.4681282-CDS-E-fasciculatus_F_contig1582:12470..128091622928051.4681282-CDS-E-fasciculatus_F_contig1582:12470..12809Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 12471..12809 -
1695995803.7883127-CDS-E-fasciculatus_F_contig1582:12470..128091695995803.7883127-CDS-E-fasciculatus_F_contig1582:12470..12809Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 12471..12809 -
1622928051.4864697-CDS-E-fasciculatus_F_contig1582:13494..135431622928051.4864697-CDS-E-fasciculatus_F_contig1582:13494..13543Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 13495..13543 -
1695995803.79879-CDS-E-fasciculatus_F_contig1582:13494..135431695995803.79879-CDS-E-fasciculatus_F_contig1582:13494..13543Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 13495..13543 -
1622928051.5032806-CDS-E-fasciculatus_F_contig1582:13994..142851622928051.5032806-CDS-E-fasciculatus_F_contig1582:13994..14285Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 13995..14285 -
1695995803.8078864-CDS-E-fasciculatus_F_contig1582:13994..142851695995803.8078864-CDS-E-fasciculatus_F_contig1582:13994..14285Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 13995..14285 -
1622928051.5469167-CDS-E-fasciculatus_F_contig1582:14662..147991622928051.5469167-CDS-E-fasciculatus_F_contig1582:14662..14799Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 14663..14799 -
1695995803.817493-CDS-E-fasciculatus_F_contig1582:14662..147991695995803.817493-CDS-E-fasciculatus_F_contig1582:14662..14799Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1582 14663..14799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1582.4000.1

>prot_E-fasciculatus_F_contig1582.4000.1 ID=prot_E-fasciculatus_F_contig1582.4000.1|Name=mRNA_E-fasciculatus_F_contig1582.4000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=272bp
MAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPG
MVARLLGATVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWERE
ADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLY
GDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTV
YRAAPSAPAPVELYEFSKGEFRGEAVAVAEGEEGGAEGGDSKGEPMEGER
SGALEVVDDGSPGAASKSTTR*
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mRNA from alignment at E-fasciculatus_F_contig1582:12079..15807-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1582.4000.1 ID=mRNA_E-fasciculatus_F_contig1582.4000.1|Name=mRNA_E-fasciculatus_F_contig1582.4000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3729bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1582:12079..15807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AACACAGCCTGGAATCAAGGTCATCAGTAAACATTTCAAGCGCGATGATA ACGACACCGTGCTTTGCACAGATCGAGTCCAAGTCGAGGTAGGCTAAGCC TATCTATCTGTGGTGTCTGCTACCTACACTCAGATGCAATCCGCGGCTGT CTTCTATCTCTTGGAGTCTTTCGTATTGGGTGGTAGAGGAGAGTGTCGAG AGCCACACGGGAAATGGCCGTGAATGTATTTCATCCACATTTGATGTGGT GCGACTTTCGTTTACATTTATTTTCAAATGCTCGAGAATGATATAATAGG CAGAGTTCTGTCACGCCTGCCTGTATTCTGTATTCTAAATACCAGCATCG GTAGTCAAGTTTTTCAATCGCGACAGGGCAGGACCGCATGCAAGGTGACC CCTAGTCCTTCGACACTGCTAGTGTTGTTTTCTTCATCTTTCTGTAGCAA TAGTTGCGACGAGTCCGCATGTATGTTGTGTAATCAGTTTTAGAAGCTCA GCTCCTACTTAGAAAGACCACATAGGGGTACCACCAATAGCACACCCGAC AAAACCGGCTGACCCGATACATTCCGTCTACACCTTCCCCGCATAAAACA CAGATAGATACACAAGACAGCTACCAAACCGTCTTGTTGAGCCTGTTACC CACAGGGGAGATATCGCTGTGTGCTACTCGGGAAATCGTGGACATACAAG TTGCCTTCCTCTAATGCTATGGATTCATTGCTAATCTATCGGAGACTTTT TTTCTGTGGATAGAGATGGGTTCGTTGTGTCATATTAAAAAAAAAAAGAT GAAACGCATACCGCTGTAGCACATCTGCCCTCCGTTACCCCGACGTAACC TCTTCTTTGTTACCACTCGGCTGCAAAACCTCGTCGACATGCCCCATGCG TGTGTCCCACCAATACTATACGGCGAACGGTTCGTGTTCTTGTGCCTTCG AAACCCTGAGTTCGATGGGGTCACGCTAGACTTGGCGCAGTCGTAAAACG GGGAGGAAATGGCGCCGATTTTCAGCGGCGCGTGCTGGGCGGGCACCGTG GTCTGGCCGGCTGCGCTGGACCTGTGCGACTACATGAGCGAGCACCTTAG ACAGGCATTGGTGGGGGCCACCGTTGTGGAGCTTGGCTGCGGGATGTGAG CCAAGGTTCAGGCAGAGCATTAAGAGCAGCACCTGTAGGTTGTTGTGGGA CGTCCATCGCTTGCTGCGTGTGATAGCGCTCACTACTCTGTTGATGGCAC TGTTGCGCCATCATCCCATGAAAAGACTTGTCGTGCTGGACGCTGCACCC AGCTGATGCCACGCCAGGCTTACAAATTGTATTTGCTCGCCCGGGGTCCA GCGGGTTGTTTCTCTAATCGTGTACGACTCGCACAAGACTTAACCCCCAA GGTGTCCGTCCGCCTCCTTCCAACCCACCCTTCCCCCCTCTCCTCACCCT TCCACCCCCAAACCACAACCAACGACGACGCAACCCCTCGGTGCCGACGC ACGCTCCATGCGACGAAAAAAGCGGCGTGCCGGGCATGGTCGCCCGCCTC CTCGGGGCCACCGTTGTCCTCACCGAGCAGGACGAGCTCCTCAGCCTCCT CGATGGAAATCTCGACAGCAACTTCGCGGGGCACCCGCGGGGCGAGGGCG GCATCCGGAGAGAAGCGCTGGACTGGGAGAGGGAGGCGGACACGGACGGC CTTCTTGCCTCCCTGGAGCGTTCTGGCGCAGCAGCACCGGGAGAAGCAGA GGGGGAATCGGGAGCGGGCGTGGGGAGGAGGTCGACGCGGCTCGACTTCG TCCTCTGCGCTGAGTGAGAGCAACGACGTAGTGCTGTGTCTGTAGCCCAT GTAGTCGGAGTTCTGATTATTTTCAAGCAGAGACAAAGATTACAGCCAGG GCGACTGCTGTGATGCCGGTTCATTAGAGACATGTGTACGTGCTACGGCA ACATGAGCAGCCGATGCGAATCCATATGTCCCCTGCAAGTAGCGCTGCCT TCGCCTCAGTTTGTGAGTGCCTGCTCCGCAAGTGCCGAACTCTTCCTAAG CAGGGCCTGCCCCTACTCCTCACGTAAACTACGCTAGAAGCCCGCCATGT ACAGCGAGATACTGCGACAAACCTTCGATTAGTCAATCGTGGAGCGTTGA TATGTTACCATGCCGCATGACTATCCCTAACCGAAACACACAATTATGTC CCATTCTTGCTCGCTCCTCTCACTACGGCCAACACAAACCCATCTACTGG GCTTGGTGGCGAAGCTGCGTTTTCGAGCCGCTGTACGGCGACTCCTGGAA GGCGTTGGCCAAGGTGACGTCATCTTTCAGTCTTGAGGGCTTGAAAGAAG CCCTCGAAACAGATCTTTTAGTATCGAAGGCGCCTATTTTGCGCCAAAAC CATTGCTCTTCTCGTGACACTGCAAGCTGTTCTGGGGGTCGGCGTGCAAG TTTTTGTGGACACGAAGGAAGTTCAATCAGTTTTGGCCACGCGCTGTGAT TCGTGGCGTGTGATGCTGCAAACGACGTTGTCGAGGCCTGGATGAAAGAG AGATCCAAAAGAACCCCCACCCCGACCCGAGACTGGGCCAGCGAAAACCC GGCATGTCGCTCCGTCCCGGCATTGTATGCATAGGGATGCGAGGTCGTCA ATGGTCTAACGACTACTGTATGGCACGCGATTACATGAGTACACACCCCC ACCCCTACCCTACCCTCGCAAGGCGTGTCGTTCCACCGGGCTTTTAACGC GGTCTTCCCTTTCTCTCTCTCTCGGCCCTCTGCCCGTGTTTTAACGTCTG TATGTCTTCCGTTTGCTATCGTCGTCGTTGGCACGCCCGCTCCTCGTGTG CTTTTCTGTGATGCATGATGCCTACATGTCCACGATGAGAAAGCTAGGCG ACCCTCTTGGGGTTGCTTCTGCAGAACGGTACTTAAGGACTCAAACCTGA ACGTCCACCCGCCTATCTCTATCCTTCTACGCATTCAACCCGGCGCAGGT GATGGGACGCCTCAGCGACGCAGGCACGACCGTCCTCTGCTCCGTCGAGC GTCGAGGGGTCGACGGCGTGCCCCAGTTCCTCCGAGCCTGCGAGGCAGAG GGGTTCTCGCTGCAGACAGTCTACCGAGCCGCGCCCAGCGCGCCGGCGCC GGTGGAGCTGTACGAGTTTTCCAAGGGGGAGTTTCGAGGAGAGGCGGTGG CCGTGGCGGAAGGCGAAGAAGGCGGTGCGGAGGGTGGCGACAGCAAGGGC GAGCCGATGGAGGGAGAGAGGAGCGGAGCGTTGGAGGTGGTGGATGATGG AAGCCCAGGGGCGGCGTCGAAGAGCACAACGAGATGATCGATGGTCGTGG CCTTCGTTTCTTGTAGCTTGGATTGGAATCAAAGTTCACTTGGATGGCAG GCGCTGGCGGAGTGGACGGGCCACTCGAAGTTCAAAGTTTTTTTATGAAA GCTCAGATCCAACCAACCGGCGTGTTGGTATTGTTGGGAGATGGCGTGCC CTTGTGCCCAAATGAGAGAAAAGGCCGACGCCTTCCGCTACAGAACTAAG AAACGGACGTGGATGCTTCTCTCGCCACAAGCATGGCATGTTGTTGCATC ATCGTGGTACCCGCGGGCACGCGGAGCAGGCAAGGTGATAAGATTGGCGA GGTAGCTCATCAAGAGCTCTCACGATATGCTCTGTACATGAACCGACAAC CTTGGGTGACATTTCCGACAACTCAGTTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1582:12079..15807-

>mRNA_E-fasciculatus_F_contig1582.4000.1 ID=mRNA_E-fasciculatus_F_contig1582.4000.1|Name=mRNA_E-fasciculatus_F_contig1582.4000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1632bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1582:12079..15807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGCCGATTTTCAGCGGCGCGTGCTGGGCGGGCACCGTGGTCTGGCC
GGCTGCGCTGGACCTGTGCGACTACATGAGCGAGCACCTTAGACAGGCAT
TGGTGGGGGCCACCGTTGTGGAGCTTGGCTGCGGGATATGGCGCCGATTT
TCAGCGGCGCGTGCTGGGCGGGCACCGTGGTCTGGCCGGCTGCGCTGGAC
CTGTGCGACTACATGAGCGAGCACCTTAGACAGGCATTGGTGGGGGCCAC
CGTTGTGGAGCTTGGCTGCGGGATCGGCGTGCCGGGCATGGTCGCCCGCC
TCCTCGGGGCCACCGTTGTCCTCACCGAGCAGGACGAGCTCCTCAGCCTC
CTCGATGGAAATCTCGACAGCAACTTCGCGGGGCACCCGCGGGGCGAGGG
CGGCATCCGGAGAGAAGCGCTGGACTGGGAGAGGGAGGCGGACACGGACG
GCCTTCTTGCCTCCCTGGAGCGTTCTGGCGCAGCAGCACCGGGAGAAGCA
GAGGGGGAATCGGGAGCGGGCGTGGGGAGGAGGTCGACGCGGCTCGACTT
CGTCCTCTGCGCTGACGGCGTGCCGGGCATGGTCGCCCGCCTCCTCGGGG
CCACCGTTGTCCTCACCGAGCAGGACGAGCTCCTCAGCCTCCTCGATGGA
AATCTCGACAGCAACTTCGCGGGGCACCCGCGGGGCGAGGGCGGCATCCG
GAGAGAAGCGCTGGACTGGGAGAGGGAGGCGGACACGGACGGCCTTCTTG
CCTCCCTGGAGCGTTCTGGCGCAGCAGCACCGGGAGAAGCAGAGGGGGAA
TCGGGAGCGGGCGTGGGGAGGAGGTCGACGCGGCTCGACTTCGTCCTCTG
CGCTGACTGCGTTTTCGAGCCGCTGTACGGCGACTCCTGGAAGGCGTTGG
CCAAGCTGCGTTTTCGAGCCGCTGTACGGCGACTCCTGGAAGGCGTTGGC
CAAGGTGATGGGACGCCTCAGCGACGCAGGCACGACCGTCCTCTGCTCCG
TCGAGCGTCGAGGGGTCGACGGCGTGCCCCAGTTCCTCCGAGCCTGCGAG
GCAGAGGGGTTCTCGCTGCAGACAGTCTACCGAGCCGCGCCCAGCGCGCC
GGCGCCGGTGGAGCTGTACGAGTTTTCCAAGGGGGAGTTTCGAGGAGAGG
CGGTGGCCGTGGCGGAAGGCGAAGAAGGCGGTGCGGAGGGTGGCGACAGC
AAGGGCGAGCCGATGGAGGGAGAGAGGAGCGGAGCGTTGGAGGTGGTGGA
TGATGGAAGCCCAGGGGCGGCGTCGAAGAGCACAACGAGATGAGTGATGG
GACGCCTCAGCGACGCAGGCACGACCGTCCTCTGCTCCGTCGAGCGTCGA
GGGGTCGACGGCGTGCCCCAGTTCCTCCGAGCCTGCGAGGCAGAGGGGTT
CTCGCTGCAGACAGTCTACCGAGCCGCGCCCAGCGCGCCGGCGCCGGTGG
AGCTGTACGAGTTTTCCAAGGGGGAGTTTCGAGGAGAGGCGGTGGCCGTG
GCGGAAGGCGAAGAAGGCGGTGCGGAGGGTGGCGACAGCAAGGGCGAGCC
GATGGAGGGAGAGAGGAGCGGAGCGTTGGAGGTGGTGGATGATGGAAGCC
CAGGGGCGGCGTCGAAGAGCACAACGAGATGA
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