mRNA_E-fasciculatus_F_contig15780.3978.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 218 bits (556), Expect = 3.960e-65 Identity = 116/135 (85.93%), Postives = 122/135 (90.37%), Query Frame = 1
Query: 1 FILQEHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLSRERMPSGETTRPEEGGSGGALSDDVAVAAETLLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
FILQEHKLGVSVHS+HPLINEARAAFP ARREYRRLR+A S ERMPS E+++P+EG GGALS VAVAA TLLSVTRALLLVNADHGSAWN RKQLVVDG CEG SIPQEIKLLNLIFTKHAKSPNAWAHRRW
Sbjct: 73 FILQEHKLGVSVHSIHPLINEARAAFPVARREYRRLRRAHSSLERMPSEESSKPKEG-RGGALSG-VAVAAATLLSVTRALLLVNADHGSAWNTRKQLVVDGLCEGSSIPQEIKLLNLIFTKHAKSPNAWAHRRW 205
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 218 bits (554), Expect = 6.060e-65 Identity = 114/135 (84.44%), Postives = 120/135 (88.89%), Query Frame = 1
Query: 1 FILQEHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLSRERMPSGETTRPEEGGSGGALSDDVAVAAETLLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
FILQEHKLGVSVHS+HPLINEAR AFP RREYRRLRQA SRERMPS E+ +P+EG GGALSD +AVAA TLLSVTRALLLVNADH SAWN RKQLVVDG CEG SIPQE+KLLNLIFTKHAKSPNAWAHRRW
Sbjct: 61 FILQEHKLGVSVHSIHPLINEARGAFPVTRREYRRLRQAHSSRERMPSEESAKPKEG-RGGALSD-LAVAAGTLLSVTRALLLVNADHASAWNTRKQLVVDGLCEGSSIPQEVKLLNLIFTKHAKSPNAWAHRRW 193
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: D8TDE4_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TDE4_SELML) HSP 1 Score: 83.6 bits (205), Expect = 3.300e-16 Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 1
Query: 1 FILQEHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLSRERMPSGETTRPEEGGSGGALSDDVAVAAETLLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
F L++HKLG++V+++ PL EA+A F A R E ++ R E G S E+LL VTRALL+VN+D+ +AWN RK+++ S + E++L +L+ T KS AWAHRRW
Sbjct: 78 FWLRDHKLGIAVNALRPLYTEAQAVFSALRAEEKQC---------------GRQENGFS----------KEESLLKVTRALLIVNSDYSTAWNTRKRVLGKSSFSQSGMISELRLSSLVLTYAPKSEEAWAHRRW 187
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A7S4DGU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGU3_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 2.080e-14 Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 1 FILQEHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLSRERMPSGETTRPEEGGS--GGALSDDVAVAAETLLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
FIL +HKLG+S+ + PL E+R AF RR++ GG GG + L+ +RALLL+N D +AWN RK+L++ G + E+K L+L+FTK AK P++WAHR W
Sbjct: 78 FILIDHKLGISMSILQPLYRESREAFCILRRQW----------------------NGGQPVGGRKTGLRRPGRMALVQSSRALLLLNPDQYTAWNTRKELILGGYLDA---KDELKFLDLVFTKQAKKPSSWAHRSW 189
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A2R6WK18_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WK18_MARPO) HSP 1 Score: 76.3 bits (186), Expect = 1.540e-13 Identity = 44/132 (33.33%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 13 EHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLSRERMPSG-ETTRPEEGGSGGALSDDVAVAAETLLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
EHKL +S+ ++ PL A+ AF ++ EYR++ +A L+ PS T +E + +++ + ++L+S TRAL+L+N DH SAWN RK+++ + + E+++ +++ + KS WAHRRW
Sbjct: 121 EHKLAISMLALAPLYKYAKDAFTSSSAEYRKIGRAELN---SPSALGTVENQESVTATSITSKCGLE-DSLMSYTRALVLINCDHASAWNMRKRILSTKTANEILLSAELRIASIVLSCAPKSEETWAHRRW 248
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A3P3YKN4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YKN4_PLABS) HSP 1 Score: 68.2 bits (165), Expect = 9.460e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 229 VTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
VTRALLLVNADH +AW R++L+ + E++L+NLIF+KH KS AWAHRRW
Sbjct: 145 VTRALLLVNADHYTAWAQRRRLITRSVVDEAD---ELRLVNLIFSKHPKSGEAWAHRRW 200
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A0H5RQV7_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RQV7_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 3.030e-10 Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 220 LLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
L++ TRA+LL+N DH SAW R+++V G + E++ LNL+F+KH+KS AWA+RRW
Sbjct: 100 LMNATRAVLLINPDHYSAWTQRRRMVESGLI---GLLAELRFLNLVFSKHSKSGEAWAYRRW 158
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A8B8DP82_CRAVI (protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DP82_CRAVI) HSP 1 Score: 66.6 bits (161), Expect = 3.260e-10 Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 1
Query: 4 ILQEHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLS-RERMPSGETTRPEEGGSGGALSDDVAVAAETLLSVTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
+LQEHKLG+ SV L A Y +L +S R+ P + P E L S+TRA+LLVNAD +AWN RK+LV +G S+ +++K L+ TKH KSP ++HR+W
Sbjct: 45 VLQEHKLGLEAWSVKVLFQYA----------YHQL----ISWRKNTPPTKFLDPGE-----------------LCSLTRAILLVNADCATAWNTRKELVDNGDL---SVTEDLKFGALVLTKHPKSPETFSHRKW 145
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: L8GVD3_ACACA (Protein prenyltransferase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVD3_ACACA) HSP 1 Score: 66.6 bits (161), Expect = 3.450e-10 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 229 VTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
++R +LL+NAD+ +AWN RK+L+ + SI QE KL+NL+ +KH KS WAHRRW
Sbjct: 129 LSRVVLLINADNYTAWNVRKRLITETH---SSIEQEFKLVNLVMSKHPKSGETWAHRRW 184
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Match: A0A152A5U3_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A5U3_9MYCE) HSP 1 Score: 65.9 bits (159), Expect = 5.830e-10 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 229 VTRALLLVNADHGSAWNARKQLVVDGSCEGGSIPQEIKLLNLIFTKHAKSPNAWAHRRW 405
+TR +L +NA++ +A N RKQL+++G E +EIKLLNLIFTKH KS +AW HRRW
Sbjct: 89 LTRTILFINAENITALNIRKQLILNGYNEH---LKEIKLLNLIFTKHPKSGDAWTHRRW 144 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15780.3978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15780.3978.1 >prot_E-fasciculatus_F_contig15780.3978.1 ID=prot_E-fasciculatus_F_contig15780.3978.1|Name=mRNA_E-fasciculatus_F_contig15780.3978.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=135bp FILQEHKLGVSVHSVHPLINEARAAFPAARREYRRLRQARLSRERMPSGEback to top mRNA from alignment at E-fasciculatus_F_contig15780:1914..2702- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15780.3978.1 ID=mRNA_E-fasciculatus_F_contig15780.3978.1|Name=mRNA_E-fasciculatus_F_contig15780.3978.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=789bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15780:1914..2702- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15780:1914..2702- >mRNA_E-fasciculatus_F_contig15780.3978.1 ID=mRNA_E-fasciculatus_F_contig15780.3978.1|Name=mRNA_E-fasciculatus_F_contig15780.3978.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=810bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15780:1914..2702- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |