mRNA_E-fasciculatus_F_contig1578.3977.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: D7FT57_ECTSI (ARL8, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT57_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.340e-64 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEK 294
MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEK
Sbjct: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEK 98
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: F0WPJ3_9STRA (AlNc14C187G8338 protein n=34 Tax=Oomycota TaxID=4762 RepID=F0WPJ3_9STRA) HSP 1 Score: 171 bits (432), Expect = 5.690e-52 Identity = 78/95 (82.11%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MGA Q+ML AFYT++LEVVLVGLENSGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A
Sbjct: 34 MGAILQKMLQAFYTKKLEVVLVGLENSGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANA 128
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A7S2C4S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4S7_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.830e-50 Identity = 75/95 (78.95%), Postives = 87/95 (91.58%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MG QRM AFYT++LEVVLVG+ENSGKTTL++VLA+G PV+T PTIGLNVK++++GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDAHA
Sbjct: 1 MGQLLQRMFDAFYTKKLEVVLVGIENSGKTTLLSVLANGAPVETCPTIGLNVKLVRKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDAHA 95
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: F0YA37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA37_AURAN) HSP 1 Score: 165 bits (417), Expect = 4.070e-50 Identity = 75/95 (78.95%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MGA F ++L AFY ++LEVVLVGLENSGKTTL+NVLA+G PV+T PTIGLNVK++++GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A
Sbjct: 1 MGAIFTKLLDAFYNKKLEVVLVGLENSGKTTLLNVLAAGRPVETCPTIGLNVKLVRKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANA 95
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A7S2RSV3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSV3_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.060e-49 Identity = 74/98 (75.51%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEK 294
MGA QRML +FYT++LEVVL+GLENSGKTTL+NVLA G P++TVPTIGLNVK++K+GG+QM CWD+GGQ QYR EWGRYTRGCDVI++VVDAHA +K
Sbjct: 1 MGALLQRMLDSFYTKKLEVVLIGLENSGKTTLLNVLAHGAPMETVPTIGLNVKLVKQGGIQMHCWDLGGQEQYRTEWGRYTRGCDVILFVVDAHAMDK 98
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A8J2SSV8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSV8_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.010e-48 Identity = 73/97 (75.26%), Postives = 87/97 (89.69%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEE 291
MGA ++L FY ++LEVVLVGLENSGKTTL+NVLA+G PV+T PTIGLNVK++++GGVQMKCWDIGGQAQYR EWGRYTRGCDVI++VVD+HA E
Sbjct: 1 MGAFLTKLLDTFYAKKLEVVLVGLENSGKTTLLNVLAAGRPVETCPTIGLNVKLVRKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIFVVDSHAIE 97
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A2D4CIT1_PYTIN (Arf/Sar family, other n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIT1_PYTIN) HSP 1 Score: 169 bits (428), Expect = 1.430e-48 Identity = 77/95 (81.05%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MG Q+ML AFYT++LEVVLVGLENSGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A
Sbjct: 1 MGGILQKMLQAFYTKKLEVVLVGLENSGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANA 95
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A0P1AND5_PLAHL (Adp-ribosylation factor family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AND5_PLAHL) HSP 1 Score: 169 bits (428), Expect = 1.980e-48 Identity = 77/95 (81.05%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MG Q+ML AFYT++LEVVLVGLENSGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A
Sbjct: 1 MGGILQKMLQAFYTKKLEVVLVGLENSGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANA 95
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A662XB41_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB41_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.120e-47 Identity = 77/110 (70.00%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLEN---------------SGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MG Q+ML AFYT++LEVVLVGLEN SGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A
Sbjct: 1 MGGILQKMLQAFYTKKLEVVLVGLENRWKSDSRECVPFLPASGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANA 110
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Match: A0A485LCR6_9STRA (Aste57867_19416 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCR6_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.030e-46 Identity = 77/113 (68.14%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 1 MGAAFQRMLSAFYTRQLEVVLVGLEN------------------SGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHA 285
MG QRML AFYT++LEVVLVGLEN +GKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A
Sbjct: 36 MGGILQRMLQAFYTKKLEVVLVGLENRYGVLADYAPVEERHLDDAGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANA 148 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1578.3977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1578.3977.1 >prot_E-fasciculatus_F_contig1578.3977.1 ID=prot_E-fasciculatus_F_contig1578.3977.1|Name=mRNA_E-fasciculatus_F_contig1578.3977.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=98bp MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLback to top mRNA from alignment at E-fasciculatus_F_contig1578:15478..17278+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1578.3977.1 ID=mRNA_E-fasciculatus_F_contig1578.3977.1|Name=mRNA_E-fasciculatus_F_contig1578.3977.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1801bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1578:15478..17278+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1578:15478..17278+ >mRNA_E-fasciculatus_F_contig1578.3977.1 ID=mRNA_E-fasciculatus_F_contig1578.3977.1|Name=mRNA_E-fasciculatus_F_contig1578.3977.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=588bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1578:15478..17278+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |