mRNA_E-fasciculatus_F_contig15751.3962.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: D7G690_ECTSI (NOT2_3_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G690_ECTSI) HSP 1 Score: 305 bits (781), Expect = 1.050e-99 Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 1
Query: 1 GPTGSSALGGATFHPPTATEGMGAGALRGAPGQPRPMGPGVAGGPTAAAVVAASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
GPTGSSALGGATFHPPTATEGMGAGALRGAPGQPRPMGPG+AGGPTAAAVVAASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA
Sbjct: 296 GPTGSSALGGATFHPPTATEGMGAGALRGAPGQPRPMGPGIAGGPTAAAVVAASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 453
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A7S2IE73_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IE73_9EUKA) HSP 1 Score: 152 bits (384), Expect = 6.390e-44 Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 166 GKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
G ++GL+GLL VIRMTD DLNTLALG+DLTT+GLNL+S+E LYA+FASPWA+ PA +P+F+LP CYY+QPP LK H FQLETLFYIFY+MP+D LQA
Sbjct: 15 GSGDRFGLMGLLSVIRMTDQDLNTLALGTDLTTLGLNLNSSECLYATFASPWADSPAQRDPEFSLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQA 117
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A7S3JSH1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSH1_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.910e-43 Identity = 74/99 (74.75%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 178 KYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
KYGL+GLL VIRMT+ DLNTLALGSDLTT+GLNL+S+E LY++FASPW++EP EPQF+LP+CYY+QPPPLK HL FQLETLFY+FY+MP+DVLQA
Sbjct: 378 KYGLMGLLDVIRMTNADLNTLALGSDLTTLGLNLNSSECLYSTFASPWSQEPTRREPQFSLPACYYMQPPPLKTSHLAKFQLETLFYVFYAMPKDVLQA 476
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A836CGQ9_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ9_9STRA) HSP 1 Score: 150 bits (378), Expect = 6.170e-43 Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 187 LLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
L GLL VIRMTDPDLN LALGSDLTT+GLNLDS+EVLYA+FA PWAE P++ EPQF LP CYY+QPP LK H F LETLFYIFY+MP D+LQA
Sbjct: 25 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQA 120
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: R1DJ08_EMIHU (NOT2_3_5 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ08_EMIHU) HSP 1 Score: 152 bits (385), Expect = 2.340e-42 Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 154 AASEGKAK-KYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
A+S G A ++GL+G+L VIRMT+PDLNTLALG+DLT++GLNL+SA+ LYA+FASPWA+ PA EP+FTLP CYY+QPP LK H FQLETLFYIFY+MP+D LQA
Sbjct: 129 ASSAGSATDRFGLMGILSVIRMTEPDLNTLALGTDLTSLGLNLNSADSLYATFASPWADAPAQREPEFTLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQA 236
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A7S0L249_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L249_9EUKA) HSP 1 Score: 149 bits (376), Expect = 2.540e-42 Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 1
Query: 157 ASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
AS +A ++GL+G+L VIRMTD DLNTLALG+DLTT+GLNL+S++ LYA+FASPWA+ PA +P+FTLP CYY+QP LK H QLETLFYIFY+MP+D LQA
Sbjct: 34 ASVARADRFGLMGILSVIRMTDQDLNTLALGTDLTTLGLNLNSSDCLYATFASPWADSPAQRDPEFTLPQCYYMQPAALKTSHFSKLQLETLFYIFYNMPRDTLQA 139
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A813H207_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H207_POLGL) HSP 1 Score: 150 bits (379), Expect = 6.590e-42 Identity = 71/100 (71.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 175 KKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
+KYGLLG+L VIRMTDPDLNTLALG DLTT+GLNL+S E LYA+FASPW++ PA +P+F LP CYY+ PP LK HL F LETLFYIFY+MP+D LQA
Sbjct: 123 EKYGLLGILKVIRMTDPDLNTLALGMDLTTLGLNLNSPECLYATFASPWSDTPARKDPEFYLPQCYYMNPPQLKTAHLGRFSLETLFYIFYNMPRDTLQA 222
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A8J2SZ99_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ99_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.340e-41 Identity = 78/106 (73.58%), Postives = 88/106 (83.02%), Query Frame = 1
Query: 178 KYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPM-------HLKNFQLETLFYIFYSMPQDVLQA 474
KYGLLGLL VIRMT+ DLNTLALGSDLTT+GLNL+S+E LY++FASPWAE P T EPQF+LP CYY+QPPPLK HL FQLETLFYIFY+MP+DVLQA
Sbjct: 402 KYGLLGLLDVIRMTNADLNTLALGSDLTTLGLNLNSSECLYSTFASPWAEAPITREPQFSLPLCYYMQPPPLKTQYLSQNKSHLSKFQLETLFYIFYAMPKDVLQA 507
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.220e-40 Identity = 70/98 (71.43%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 181 YGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
YGLLGLLGVIRM+D D N LALGSDLT +GLNL+S+E LY++FASPW++ P T EPQ+ LP CYY+QPP LK HL FQLETLFYIFY++P+DVLQA
Sbjct: 148 YGLLGLLGVIRMSDADRNALALGSDLTLLGLNLNSSEHLYSTFASPWSDSPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA 245
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Match: A0A7S4BBN1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BBN1_CHRCT) HSP 1 Score: 150 bits (378), Expect = 1.260e-40 Identity = 69/103 (66.99%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 166 GKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 474
G+A ++GL+G+L VIRMTD DLNTLALG+DLTT+GLNL+S++ LYA+FASPWA+ PA +P+F LP CYY+QPP LK H QLETLFYIFY+MP+D LQA
Sbjct: 239 GRADRFGLMGILSVIRMTDQDLNTLALGTDLTTLGLNLNSSDCLYATFASPWADAPAQCDPEFNLPQCYYMQPPALKTSHFSKLQLETLFYIFYNMPRDTLQA 341 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15751.3962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15751.3962.1 >prot_E-fasciculatus_F_contig15751.3962.1 ID=prot_E-fasciculatus_F_contig15751.3962.1|Name=mRNA_E-fasciculatus_F_contig15751.3962.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=158bp GPTGSSALGGATFHPPTATEGMGAGALRGAPGQPRPMGPGVAGGPTAAAVback to top mRNA from alignment at E-fasciculatus_F_contig15751:527..2787+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15751.3962.1 ID=mRNA_E-fasciculatus_F_contig15751.3962.1|Name=mRNA_E-fasciculatus_F_contig15751.3962.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2261bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15751:527..2787+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15751:527..2787+ >mRNA_E-fasciculatus_F_contig15751.3962.1 ID=mRNA_E-fasciculatus_F_contig15751.3962.1|Name=mRNA_E-fasciculatus_F_contig15751.3962.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=948bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15751:527..2787+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |