mRNA_E-fasciculatus_F_contig157.3936.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig157.3936.1 vs. uniprot
Match: A0A6H5K203_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K203_9PHAE) HSP 1 Score: 1011 bits (2613), Expect = 0.000e+0 Identity = 654/819 (79.85%), Postives = 676/819 (82.54%), Query Frame = 2
Query: 206 MRPAAASMDGQQEGDHHQAVAEIVEDDLPVQDTLGTDVAKDGTSGADTGNMPVADVMVLLQAMREEQLDSLKSIADGVQQLQSQVMVLGEFARNSEGRTSLVLDRLARIDARLDPIPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGRARAMNAPQHSSAFGKAAPXXXPATVEDSGRVPTWQGRAEPEPARPHFMRNASPQQKPRASPAKPAPATAAATVVPGGGVTAGSAVAPGEASGGGKGEGVSPEEAARKEAKRLAFMEDRARIQARIAASKGGRAAQASSPKPTPTTTRQSTPADQDIKAQNPELFETPSAASGGEGGSFSGSPSFLDGVRGGAVGAXXXXXXXXXXXXXXXXXXXXQRGKXXXXXREXXXXVERQLAEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTRVLMSSLFDKGEEDDGNSLFGGLGGAALPVFHDDDNNGSRAHDTSLAEQPEEKPVAPASSVSEADDPPLSSGFGSGIGGVGGSLFAGIEEPSTGRGGIFDEVDTPGSPSGDPRSSPMGGLSSARQGSSNGGGSGLFPDEEPSLPESRVGAGDGGDGNVDAQPGGYSGLFDSSPPLEGSSSSLANN-ADAASTKATVTTLEGSATDIIGASSKATIATTTDGAPDEMDDFFSTLEAGSVSAASTGAATTTATRGSLFEHDDISGAGDGDDDDIFSSAYAGVTAGTGGDSTQSGRGNKGALFDPSASQSAGTSLFDRMEFSIDAEDPDGGNVFGGGGVSGGGRGIGDASASFLSAMGEVDLMTPSGDGGVEGEVEGEADKEGMTEVSL 2659
MR AAASMDGQQEGDHHQAVAEIVEDDL VQD L DVAKDG SGADTG+MP+ADVMVLLQAMREEQLDSLKSIADGVQQLQSQVMVLGE AR+SEG+ SL LDRL RI+ RLD + XXXXXXX DGRA+AM APQ SSAFGKAAP XXPATVED+GRVPTWQGRAEPEPA PHFMRNASPQQK RA AK APATAAATVVP GG A SAV PGEASGGGKGEGVS EEAA+KEAKRLAFMEDRARIQARIAASKGGRAA ASSPKPTPTTT QS PA QDI+AQ PE FETPSAAS GEGGSFSGSPSFLD V GG VGA QRGKXXXXXREXXX VERQLAEAK XXXXXXXXXXXXXXXXXXXXXXXXX KTRVLMSSLFDK +EDD NSLFGGLGGAALPVFHDDDNNGSRAHDTSLAEQ EEKP APASSVSEAD PPL GFGSGIGG GGSLFAG+EEPSTGRGGIF+EV+ G+P GDP SSP+GGLSSARQ SSNG GSGLFPDEEP+ PESR+GAGDGG NVD QPGGYSGLFDSSPPLEGSSSSLAN A A S KATVTTLEGSAT I GASS AT+A TTDGA DEMDDFFS LEA SVSA STGAATTTATRGSLFE+D ISGAGD DDDIFSS+Y GVT G GDSTQS RGNKGALFDPS SQSAGTSLFDRMEFSIDA DP GGNVFGGGGVSGGGRGIGDASASFLSAMG+VDLM PSGD GVEGEV GEADKEGMTEVSL
Sbjct: 1 MRAAAASMDGQQEGDHHQAVAEIVEDDLHVQDALAADVAKDGMSGADTGSMPIADVMVLLQAMREEQLDSLKSIADGVQQLQSQVMVLGESARHSEGKMSLALDRLGRIEIRLDSTTVPMKSQMTVPPKSQQXXXXXXXSRTYANIGAGMGGRMGADGRAKAMKAPQPSSAFGKAAPPXXPATVEDAGRVPTWQGRAEPEPAWPHFMRNASPQQKSRAPSAKSAPATAAATVVPVGGAAAVSAVTPGEASGGGKGEGVSQEEAAKKEAKRLAFMEDRARIQARIAASKGGRAAPASSPKPTPTTTHQSAPAAQDIQAQKPEPFETPSAASAGEGGSFSGSPSFLDSV-GGDVGAGAGGGRADDEAEAWLEREREQRGKXXXXXREXXXRVERQLAEAKKFREXXXXXXXXXXXXXXXXXXXXXXXXXKRQAKTRVLMSSLFDKSDEDDSNSLFGGLGGAALPVFHDDDNNGSRAHDTSLAEQLEEKPEAPASSVSEADAPPLPPGFGSGIGGGGGSLFAGMEEPSTGRGGIFEEVNMSGAPDGDPHSSPVGGLSSARQSSSNGVGSGLFPDEEPTPPESRLGAGDGGYVNVDVQPGGYSGLFDSSPPLEGSSSSLANKKAGANSPKATVTTLEGSATGITGASSNATVAATTDGAADEMDDFFSKLEAASVSAPSTGAATTTATRGSLFENDGISGAGDEGDDDIFSSSYTGVTGGXXGDSTQS-RGNKGALFDPSDSQSAGTSLFDRMEFSIDAGDPAGGNVFGGGGVSGGGRGIGDASASFLSAMGDVDLMMPSGDDGVEGEVGGEADKEGMTEVSL 817
BLAST of mRNA_E-fasciculatus_F_contig157.3936.1 vs. uniprot
Match: D8LIT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIT5_ECTSI) HSP 1 Score: 900 bits (2326), Expect = 2.090e-313 Identity = 618/851 (72.62%), Postives = 634/851 (74.50%), Query Frame = 2
Query: 227 MDGQQEGDHHQAVAEIVEDDLPVQDTLGTDVAKDGTSGADTGNMPVADVMVLLQAMREEQLDSLKSIADGVQQLQSQVMVLGEFARNSEGRTSLVLDRLARIDARLDPI--PMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGRARAMNAPQHSSAFGKAAPXXXPATVEDSGRVPTWQGRAEPEPARPHFMRNASPQQKPRASPAKPAPATAAATVVPGGGVTAGSAVAPGEASGGGKGEGVSPEEAARKEAKRLAFMEDRARIQ-------------------------------------ARIAASKGGRAAQASSPKPTPTTTRQSTPADQDIKAQNPELFETPSAASGGEGGSFSGSPSFLDGVRGGAVGAXXXXXXXXXXXXXXXXXXXXQRGKXXXXXREXXXXVERQLAEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTRVLMSSLFDKGEEDDGNSLFGGLGGAALPVFHDDDNNGSRAHDTSLAEQPEEKPVAPASSVSEADDPPLSSGFGSGIGGVGGSLFAGIEEPSTGRGGIFDEVDTPGSPSGDPRSSPMGGLSSARQGSSNGGGSGLFPDEEPSLPESRVGAGDGGDGNVDAQPGGYSGLFDSSPPLEGSSSSLAN-NADAASTKATVTTLEGSATDIIGASSKATIATTTDGAPDEMDDFFSTLEAGSVSAASTGAATTTATRGSLFEHDDISGAGDGDDDDIFSSAYAGVTAGTGGDSTQSGRGNKGALFDPSASQSAGTSLFDRMEFSIDAEDPDGGNVFGGGGVSGGGRGIGDASASFLSAMGEVDLMTPSGDGGVEGEVEGEADKEGMTEVSL 2659
MDGQQEGDHHQAV LLQAMREEQLDSLKSIADGVQQ VMVLGE ARNSEG+ SL LDRL RI+ RLD PM DGRA+AM APQ SAFGKAAP PATVED+GRVPTWQGR EPEPARPHFMRNASPQQKPRASPAK PATAAATVVP GG A SAV PGEASGGGKGEGVS EEAARKEAKRLAFMEDRARIQ ARIAASKGGRAA AS PKPTPTTTRQSTPA QDIKAQ PELFETP AAS GEGG+FSGSPSFLDGV GG VGA QR XXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KTRVLMSSLFDKGEEDDGNSLFGGLGGAALPVFHDDDN GSRA DTSLAEQPEEKPVAPASSVSEAD PPLSSGFGSGIGG GGSLFAG+EEPSTGRGGIFDE +T G+P GDP SS +GGLSSARQGSSNG GSGLFPDEEPS PESRVGAGDGG GNVD QPGGYSGLFDSSPP+EGSSSS+A+ NA A S KATVTTLEGSAT I GASS ATIATT DGA DEMDDFFSTLEA SVSA STGAATTTATRGSLFE+D ISG GDG DDDIFSS+Y GVT GTGGDSTQS RGN+G LFDPSASQSAGTSLFDRMEFS+DAEDPDGGNVFGGGGVSGGGRGIGDASASFLSAMGEVDLMTP GD GVEGEV GEADKEGMTEVSL
Sbjct: 1 MDGQQEGDHHQAV--------------------------------------LLQAMREEQLDSLKSIADGVQQ----VMVLGESARNSEGKMSLALDRLGRIEVRLDSTTAPMKSQTIVPPKSQQQQQPHSRTHPNIGAGMGGGMG----ADGRAKAMKAPQPYSAFGKAAPPPPPATVEDAGRVPTWQGRGEPEPARPHFMRNASPQQKPRASPAKTVPATAAATVVPVGGAAAVSAVTPGEASGGGKGEGVSQEEAARKEAKRLAFMEDRARIQYLYRVRRDMEPAREVGDQASGGSIPMLDFRPQRDGRKARIAASKGGRAAPASFPKPTPTTTRQSTPAAQDIKAQQPELFETPLAASAGEGGTFSGSPSFLDGV-GGDVGAGAEGGRADDEAEAWLEREREQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTRVLMSSLFDKGEEDDGNSLFGGLGGAALPVFHDDDN-GSRARDTSLAEQPEEKPVAPASSVSEADAPPLSSGFGSGIGGGGGSLFAGMEEPSTGRGGIFDEANTSGAPGGDPHSSTVGGLSSARQGSSNGVGSGLFPDEEPSPPESRVGAGDGGYGNVDVQPGGYSGLFDSSPPVEGSSSSMADKNAGANSPKATVTTLEGSATGITGASSNATIATTADGAADEMDDFFSTLEAASVSAPSTGAATTTATRGSLFENDGISGTGDGGDDDIFSSSYTGVTGGTGGDSTQS-RGNEGELFDPSASQSAGTSLFDRMEFSMDAEDPDGGNVFGGGGVSGGGRGIGDASASFLSAMGEVDLMTPGGDDGVEGEVGGEADKEGMTEVSL 802 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig157.3936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig157.3936.1 >prot_E-fasciculatus_F_contig157.3936.1 ID=prot_E-fasciculatus_F_contig157.3936.1|Name=mRNA_E-fasciculatus_F_contig157.3936.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=819bp MRPAAASMDGQQEGDHHQAVAEIVEDDLPVQDTLGTDVAKDGTSGADTGNback to top mRNA from alignment at E-fasciculatus_F_contig157:3804..15291+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig157.3936.1 ID=mRNA_E-fasciculatus_F_contig157.3936.1|Name=mRNA_E-fasciculatus_F_contig157.3936.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=11488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig157:3804..15291+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig157:3804..15291+ >mRNA_E-fasciculatus_F_contig157.3936.1 ID=mRNA_E-fasciculatus_F_contig157.3936.1|Name=mRNA_E-fasciculatus_F_contig157.3936.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4914bp|location=Sequence derived from alignment at E-fasciculatus_F_contig157:3804..15291+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |