mRNA_E-fasciculatus_F_contig15657.3923.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.290e-122 Identity = 217/303 (71.62%), Postives = 231/303 (76.24%), Query Frame = 1
Query: 1 GKLRLWGAIGFGIASLIGGYVCDSYGGSYAGVMVVFVANVAVALAASTGVPIGRQGGGNRGTPTRDKQLDSSDGG----DGVPSGGDFELGDKRTKSPVSPRTSSRGGVVARDETEGEPECGSLIGTATMAPAAATNTASTADADNHLDLHGNXXXXXXXXXXXXAALLSXXXXXXXXXXXXXXXXXXXASRXXXEGPGAKAKEQGGVLMAVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
G LRLWGAIGFGIASLIGGYVCDSYGGSY GVM+VFVANVAVA+AASTGVPIGR+GGG T TRDKQL +GV +GGDFELG+K T+SPVSPRTSSRG VARD+TEGEPECG LIGTA + PA AT+TA+TAD D L L + AALLS SR X AKAKEQ GVLMAVRIMM T ESASFF AVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMC+AEVPFFYLSGPLIRRVGVRGVIALTQ+AYLTRFIYYSV
Sbjct: 76 GNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGG---TATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATAD-DIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSV 374
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE) HSP 1 Score: 370 bits (950), Expect = 1.600e-122 Identity = 212/306 (69.28%), Postives = 232/306 (75.82%), Query Frame = 1
Query: 1 GKLRLWGAIGFGIASLIGGYVCDSYGGSYAGVMVVFVANVAVALAASTGVPIGRQGGGNRGTPTRDKQLDSSDGGDG-------VPSGGDFELGDKRTKSPVSPRTSSRGGVVARDETEGEPECGSLIGTATMAPAAATNTASTADADNHLDLHGNXXXXXXXXXXXXAALLSXXXXXXXXXXXXXXXXXXXASRXXXEGPGAKAKEQGGVLMAVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
G LRLWGAIGFGIASLIGG+VCDSYGGSY GVM+VFVANVAVA+AASTGVPIGR+GGG T TRDKQL V +GGDFELG+KRT+SPVSPRT++RG VARD+T GEP+C LIGTA + PA AT+TA+TAD NH L+ + +ALLS ASR EGPG KAKEQGGVLMAVRIM T ESASFF AVGLSGMG+GVIDTFLFIRLEELGGSHVLCGLARLIMC+AEVPFFYLSGPLIRRVGVRGVIALTQ+AYLTRFIYYSV
Sbjct: 128 GNLRLWGAIGFGIASLIGGFVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGG---TATRDKQLGGXXXXXXXXXXXXXVATGGDFELGEKRTESPVSPRTATRGCAVARDKTAGEPKCAGLIGTAAVTPAVATDTAATADG-NHDHLYDDDEPEGNDEAQTHSALLSRPRTTSDKDGGGDTNGSSGASRGDGEGPGRKAKEQGGVLMAVRIMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSV 429
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE) HSP 1 Score: 216 bits (549), Expect = 6.530e-64 Identity = 160/302 (52.98%), Postives = 186/302 (61.59%), Query Frame = 1
Query: 1 GKLRLWGAIGFGIASLIGGYVCDSYGGSYAGVMVVFVANVAVALAASTGVPIGR-QGGGNRGTPTRDKQLDSSDGGDGVPSGGDFELGDKRTKSPVSPRTSSRGGVVARDETEGEPECGSLIG-TATMAPAAATNTASTADADNHLDLHGNXXXXXXXXXXXXA-ALLSXXXXXXXXXXXXXXXXXXXASRXXXEGPGAKAKEQGGVLMAVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
G RLWGA+GFG ASL+ GYVCD YGGS++GVM+VFV NV VAL ASTGVPIG+ D+ ++ + GG SG E D+ G+ + + + GS + T + + + NHLDLH XXXXXXXX ALL X XXXXXX A E+ GV+MA+RIM+ T ESASFF+AV LSGMG GVIDTFLFIRLEELGGS VLCGLARLIMC+AEVPFFYLSGPLIRR G RGVIAL QLAYLTRF+YYSV
Sbjct: 97 GSQRLWGAVGFGTASLVAGYVCDLYGGSFSGVMLVFVGNVLVALMASTGVPIGQVNNDXXXXXXXNDQNIEGASGGSNA-SGEVLESADRENNDK---------GIGWKGVHQEHKKVGSSLRLTVSTSNTSTXXXXXXXXXXNHLDLHXXXXXXXXXXQTTDGDALLEYHPGDSRTGGGXKXXXXXXXG----------AGEKAGVVMAIRIMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSV 378
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE) HSP 1 Score: 138 bits (347), Expect = 4.740e-35 Identity = 108/299 (36.12%), Postives = 141/299 (47.16%), Query Frame = 1
Query: 1 GKLRLWGAIGFGIASLIGGYVCDSYGGSYAGVMVVFVANVAVALAASTGVPIGRQGGGNRGTPTRDKQLDSSDGGDGVPSGGDFELGDKRTKSPVSPRTSSRGGVVARDETEGEPECGSLIGTATMAPAAATNTASTADADNHLDLHGNXXXXXXXXXXXXAALLSXXXXXXXXXXXXXXXXXXXASRXXXEGPGAKAKEQGGVLMAVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
G R WGA G+G+A+LI G+V D+ GGSY G+MVVFV +A+AL A+ GVP+GR P+GG + + +S S S+ G ETE L+ T TNT N DL + P +E+ V + IM ++ SFF V LSGM GVIDTFLFI L+ELGGSHVL GLA ++MC EVPFFY+SG IR++G R V+AL+Q+ Y+ R +YYSV
Sbjct: 42 GTQRSWGAAGYGLATLISGFVYDAAGGSYDGLMVVFVTVLALALLAALGVPVGRTN---------------------EPAGGQDDEEPRGDRSGTSDNWSAHG------ETE-------LVETGRAREDEVTNTRPCVGM-NVDDLE---------------------------------------DEESSKRPDHVEQEEHRVASVLWIMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSV 266
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.630e-25 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 595 KEQGGVLMAVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
+E+ V + IM T ++ SFF V LSGM GVIDTFLFI L+ELGGSHVL GLA ++MC EVPFFY+SG IR++G R V+AL+Q+ Y+ R +YYSV
Sbjct: 225 QEEHRVASVLWIMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSV 325
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE) HSP 1 Score: 89.7 bits (221), Expect = 1.780e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 592 AKEQGGVLMAVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYS 894
A +Q ++ + +M A + FF + LSG GAG+ID +LFI +EELGG+ + G+AR +MC AEVP F+ SG + R+G G + +T A++ RF+ Y+
Sbjct: 240 APQQAALIEILHVMTKDAYTTIFFLTIALSGFGAGIIDNYLFIYIEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYA 340
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A0A7S0ZL95_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD) HSP 1 Score: 84.3 bits (207), Expect = 1.160e-14 Identity = 39/80 (48.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 658 FFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
FF + +SG+G G+I+TFLF+RL ELG + + G++RL+MC+ E+PFF+ + L+ R GV GV+ + Q AY RF +YSV
Sbjct: 262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSV 341
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: F2U1L1_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1L1_SALR5) HSP 1 Score: 82.0 bits (201), Expect = 1.040e-13 Identity = 38/92 (41.30%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 619 AVRIMMGTAESASFFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYS 894
A+R+++ A + FF + ++G G GVI+TFLFI +++LGGS + G R + C++EVP F+ SG ++ ++GV G + LT + Y+ RF YS
Sbjct: 501 ALRVIVQDANTMMFFFIIVVAGFGVGVIETFLFIFIQQLGGSETVQGFGRFVTCMSEVPLFWFSGYIMNKLGVNGCLMLTFVCYVLRFTIYS 592
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A0A7S2ZDV9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDV9_9RHOD) HSP 1 Score: 80.1 bits (196), Expect = 1.920e-13 Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 679 SGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYSV 897
SG GV+D++LF+RL+ELG VL GLAR + C++E+PFF+ PL+ R+GV ++AL QL Y RF YSV
Sbjct: 221 SGSFCGVLDSYLFLRLKELGAPGVLMGLARFVNCISEIPFFFYIRPLMERIGVFNLVALAQLGYTLRFATYSV 293
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Match: A0A8K0EMS7_BRALA (MFSD6 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EMS7_BRALA) HSP 1 Score: 69.7 bits (169), Expect = 1.120e-9 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 658 FFSAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCVAEVPFFYLSGPLIRRVGVRGVIALTQLAYLTRFIYYS 894
F S + + G GV++TF F L++LGGS +L GL + C+AEVPFF+ SG LI ++ +GV +L+ + RF++ S
Sbjct: 296 FLSVLFVLGSSFGVLETFAFWFLKDLGGSQLLLGLCLTVNCIAEVPFFFFSGKLIEKISHKGVFSLSLFCFALRFLFLS 374 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15657.3923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15657.3923.1 >prot_E-fasciculatus_F_contig15657.3923.1 ID=prot_E-fasciculatus_F_contig15657.3923.1|Name=mRNA_E-fasciculatus_F_contig15657.3923.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=299bp GKLRLWGAIGFGIASLIGGYVCDSYGGSYAGVMVVFVANVAVALAASTGVback to top mRNA from alignment at E-fasciculatus_F_contig15657:632..2915- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15657.3923.1 ID=mRNA_E-fasciculatus_F_contig15657.3923.1|Name=mRNA_E-fasciculatus_F_contig15657.3923.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2284bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15657:632..2915- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15657:632..2915- >mRNA_E-fasciculatus_F_contig15657.3923.1 ID=mRNA_E-fasciculatus_F_contig15657.3923.1|Name=mRNA_E-fasciculatus_F_contig15657.3923.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15657:632..2915- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |